Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_02371

Experiment: lib only

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_02369 and OHPLBJKB_02370 are separated by 30 nucleotidesOHPLBJKB_02370 and OHPLBJKB_02371 overlap by 14 nucleotidesOHPLBJKB_02371 and OHPLBJKB_02372 are separated by 20 nucleotides OHPLBJKB_02369: OHPLBJKB_02369 - L-threonine 3-dehydrogenase, at 2,479,179 to 2,480,231 _02369 OHPLBJKB_02370: OHPLBJKB_02370 - Inner membrane ABC transporter permease protein YcjP, at 2,480,262 to 2,481,104 _02370 OHPLBJKB_02371: OHPLBJKB_02371 - Inner membrane ABC transporter permease protein YcjO, at 2,481,091 to 2,481,972 _02371 OHPLBJKB_02372: OHPLBJKB_02372 - hypothetical protein, at 2,481,993 to 2,483,285 _02372 Position (kb) 2481 2482Strain fitness (log2 ratio) -2 -1 0 1 2at 2480.163 kb on + strandat 2480.233 kb on + strandat 2480.233 kb on + strandat 2480.234 kb on - strandat 2480.245 kb on + strandat 2480.300 kb on + strandat 2480.320 kb on + strandat 2480.321 kb on - strandat 2480.321 kb on - strandat 2480.321 kb on - strandat 2480.321 kb on - strandat 2480.324 kb on + strandat 2480.324 kb on + strandat 2480.324 kb on + strandat 2480.324 kb on + strandat 2480.324 kb on + strandat 2480.325 kb on - strandat 2480.325 kb on - strandat 2480.325 kb on - strandat 2480.325 kb on - strandat 2480.380 kb on + strand, within OHPLBJKB_02370at 2480.380 kb on + strand, within OHPLBJKB_02370at 2480.381 kb on - strand, within OHPLBJKB_02370at 2480.381 kb on - strand, within OHPLBJKB_02370at 2480.381 kb on - strand, within OHPLBJKB_02370at 2480.484 kb on - strand, within OHPLBJKB_02370at 2480.628 kb on - strand, within OHPLBJKB_02370at 2480.689 kb on + strand, within OHPLBJKB_02370at 2480.690 kb on - strand, within OHPLBJKB_02370at 2480.750 kb on + strand, within OHPLBJKB_02370at 2480.750 kb on + strand, within OHPLBJKB_02370at 2480.750 kb on + strand, within OHPLBJKB_02370at 2480.750 kb on + strand, within OHPLBJKB_02370at 2480.750 kb on + strand, within OHPLBJKB_02370at 2480.750 kb on + strand, within OHPLBJKB_02370at 2480.750 kb on + strand, within OHPLBJKB_02370at 2480.751 kb on - strand, within OHPLBJKB_02370at 2480.751 kb on - strand, within OHPLBJKB_02370at 2480.751 kb on - strand, within OHPLBJKB_02370at 2480.751 kb on - strand, within OHPLBJKB_02370at 2480.751 kb on - strand, within OHPLBJKB_02370at 2480.751 kb on - strand, within OHPLBJKB_02370at 2480.752 kb on + strand, within OHPLBJKB_02370at 2480.752 kb on + strand, within OHPLBJKB_02370at 2480.752 kb on + strand, within OHPLBJKB_02370at 2480.752 kb on + strand, within OHPLBJKB_02370at 2480.752 kb on + strand, within OHPLBJKB_02370at 2480.752 kb on + strand, within OHPLBJKB_02370at 2480.752 kb on + strand, within OHPLBJKB_02370at 2480.752 kb on + strand, within OHPLBJKB_02370at 2480.752 kb on + strand, within OHPLBJKB_02370at 2480.752 kb on + strand, within OHPLBJKB_02370at 2480.753 kb on - strand, within OHPLBJKB_02370at 2480.753 kb on - strand, within OHPLBJKB_02370at 2480.753 kb on - strand, within OHPLBJKB_02370at 2480.753 kb on - strand, within OHPLBJKB_02370at 2480.753 kb on - strand, within OHPLBJKB_02370at 2480.753 kb on - strand, within OHPLBJKB_02370at 2480.753 kb on - strand, within OHPLBJKB_02370at 2480.753 kb on - strand, within OHPLBJKB_02370at 2480.762 kb on - strand, within OHPLBJKB_02370at 2480.792 kb on + strand, within OHPLBJKB_02370at 2480.929 kb on + strand, within OHPLBJKB_02370at 2480.930 kb on - strand, within OHPLBJKB_02370at 2480.930 kb on - strand, within OHPLBJKB_02370at 2480.930 kb on - strand, within OHPLBJKB_02370at 2480.963 kb on + strand, within OHPLBJKB_02370at 2480.964 kb on - strand, within OHPLBJKB_02370at 2481.092 kb on + strandat 2481.222 kb on - strand, within OHPLBJKB_02371at 2481.222 kb on - strand, within OHPLBJKB_02371at 2481.222 kb on - strand, within OHPLBJKB_02371at 2481.223 kb on + strand, within OHPLBJKB_02371at 2481.223 kb on + strand, within OHPLBJKB_02371at 2481.223 kb on + strand, within OHPLBJKB_02371at 2481.223 kb on + strand, within OHPLBJKB_02371at 2481.224 kb on - strand, within OHPLBJKB_02371at 2481.224 kb on - strand, within OHPLBJKB_02371at 2481.224 kb on - strand, within OHPLBJKB_02371at 2481.224 kb on - strand, within OHPLBJKB_02371at 2481.224 kb on - strand, within OHPLBJKB_02371at 2481.224 kb on - strand, within OHPLBJKB_02371at 2481.224 kb on - strand, within OHPLBJKB_02371at 2481.224 kb on - strand, within OHPLBJKB_02371at 2481.224 kb on - strand, within OHPLBJKB_02371at 2481.224 kb on - strand, within OHPLBJKB_02371at 2481.224 kb on - strand, within OHPLBJKB_02371at 2481.224 kb on - strand, within OHPLBJKB_02371at 2481.257 kb on + strand, within OHPLBJKB_02371at 2481.258 kb on - strand, within OHPLBJKB_02371at 2481.258 kb on - strand, within OHPLBJKB_02371at 2481.276 kb on - strand, within OHPLBJKB_02371at 2481.276 kb on - strand, within OHPLBJKB_02371at 2481.276 kb on - strand, within OHPLBJKB_02371at 2481.276 kb on - strand, within OHPLBJKB_02371at 2481.325 kb on - strand, within OHPLBJKB_02371at 2481.325 kb on - strand, within OHPLBJKB_02371at 2481.325 kb on - strand, within OHPLBJKB_02371at 2481.490 kb on - strand, within OHPLBJKB_02371at 2481.490 kb on - strand, within OHPLBJKB_02371at 2481.558 kb on + strand, within OHPLBJKB_02371at 2481.559 kb on - strand, within OHPLBJKB_02371at 2481.587 kb on + strand, within OHPLBJKB_02371at 2481.622 kb on + strand, within OHPLBJKB_02371at 2481.623 kb on - strand, within OHPLBJKB_02371at 2481.623 kb on - strand, within OHPLBJKB_02371at 2481.627 kb on - strand, within OHPLBJKB_02371at 2481.627 kb on - strand, within OHPLBJKB_02371at 2481.736 kb on - strand, within OHPLBJKB_02371at 2481.794 kb on + strand, within OHPLBJKB_02371at 2481.794 kb on + strand, within OHPLBJKB_02371at 2481.795 kb on - strand, within OHPLBJKB_02371at 2481.795 kb on - strand, within OHPLBJKB_02371at 2481.795 kb on - strand, within OHPLBJKB_02371at 2481.795 kb on - strand, within OHPLBJKB_02371at 2481.795 kb on - strand, within OHPLBJKB_02371at 2481.795 kb on - strand, within OHPLBJKB_02371at 2481.795 kb on - strand, within OHPLBJKB_02371at 2481.847 kb on + strand, within OHPLBJKB_02371at 2481.847 kb on + strand, within OHPLBJKB_02371at 2481.905 kb on - strandat 2481.907 kb on + strandat 2481.907 kb on + strandat 2482.043 kb on + strandat 2482.044 kb on - strandat 2482.044 kb on - strandat 2482.194 kb on + strand, within OHPLBJKB_02372at 2482.211 kb on + strand, within OHPLBJKB_02372at 2482.257 kb on - strand, within OHPLBJKB_02372at 2482.402 kb on + strand, within OHPLBJKB_02372at 2482.482 kb on - strand, within OHPLBJKB_02372at 2482.483 kb on + strand, within OHPLBJKB_02372at 2482.483 kb on + strand, within OHPLBJKB_02372at 2482.483 kb on + strand, within OHPLBJKB_02372at 2482.483 kb on + strand, within OHPLBJKB_02372at 2482.483 kb on + strand, within OHPLBJKB_02372at 2482.483 kb on + strand, within OHPLBJKB_02372at 2482.483 kb on + strand, within OHPLBJKB_02372at 2482.483 kb on + strand, within OHPLBJKB_02372at 2482.483 kb on + strand, within OHPLBJKB_02372at 2482.483 kb on + strand, within OHPLBJKB_02372at 2482.484 kb on - strand, within OHPLBJKB_02372at 2482.484 kb on - strand, within OHPLBJKB_02372at 2482.484 kb on - strand, within OHPLBJKB_02372at 2482.484 kb on - strand, within OHPLBJKB_02372at 2482.484 kb on - strand, within OHPLBJKB_02372at 2482.484 kb on - strand, within OHPLBJKB_02372at 2482.484 kb on - strand, within OHPLBJKB_02372at 2482.521 kb on - strand, within OHPLBJKB_02372at 2482.551 kb on - strand, within OHPLBJKB_02372at 2482.562 kb on + strand, within OHPLBJKB_02372at 2482.562 kb on + strand, within OHPLBJKB_02372at 2482.563 kb on - strand, within OHPLBJKB_02372at 2482.586 kb on - strand, within OHPLBJKB_02372at 2482.588 kb on + strand, within OHPLBJKB_02372at 2482.589 kb on - strand, within OHPLBJKB_02372at 2482.589 kb on - strand, within OHPLBJKB_02372at 2482.616 kb on + strand, within OHPLBJKB_02372at 2482.616 kb on + strand, within OHPLBJKB_02372at 2482.730 kb on - strand, within OHPLBJKB_02372at 2482.901 kb on + strand, within OHPLBJKB_02372

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Per-strain Table

Position Strand Gene LocusTag Fraction lib only
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2,480,163 + -1.2
2,480,233 + -1.2
2,480,233 + +0.1
2,480,234 - +0.1
2,480,245 + +0.8
2,480,300 + -1.6
2,480,320 + -0.4
2,480,321 - +0.7
2,480,321 - +0.3
2,480,321 - +0.3
2,480,321 - -1.2
2,480,324 + -0.6
2,480,324 + -0.1
2,480,324 + -0.0
2,480,324 + +0.3
2,480,324 + -0.0
2,480,325 - +0.5
2,480,325 - -0.7
2,480,325 - +0.5
2,480,325 - +0.6
2,480,380 + OHPLBJKB_02370 0.14 -0.6
2,480,380 + OHPLBJKB_02370 0.14 +0.6
2,480,381 - OHPLBJKB_02370 0.14 -0.7
2,480,381 - OHPLBJKB_02370 0.14 -0.1
2,480,381 - OHPLBJKB_02370 0.14 +0.4
2,480,484 - OHPLBJKB_02370 0.26 -0.4
2,480,628 - OHPLBJKB_02370 0.43 +0.1
2,480,689 + OHPLBJKB_02370 0.51 +1.8
2,480,690 - OHPLBJKB_02370 0.51 +0.4
2,480,750 + OHPLBJKB_02370 0.58 +0.9
2,480,750 + OHPLBJKB_02370 0.58 +0.8
2,480,750 + OHPLBJKB_02370 0.58 -0.5
2,480,750 + OHPLBJKB_02370 0.58 -0.1
2,480,750 + OHPLBJKB_02370 0.58 +0.5
2,480,750 + OHPLBJKB_02370 0.58 -0.6
2,480,750 + OHPLBJKB_02370 0.58 +0.9
2,480,751 - OHPLBJKB_02370 0.58 +0.4
2,480,751 - OHPLBJKB_02370 0.58 +1.1
2,480,751 - OHPLBJKB_02370 0.58 -0.4
2,480,751 - OHPLBJKB_02370 0.58 +0.1
2,480,751 - OHPLBJKB_02370 0.58 +0.2
2,480,751 - OHPLBJKB_02370 0.58 +0.8
2,480,752 + OHPLBJKB_02370 0.58 -0.2
2,480,752 + OHPLBJKB_02370 0.58 +0.3
2,480,752 + OHPLBJKB_02370 0.58 +0.4
2,480,752 + OHPLBJKB_02370 0.58 -0.3
2,480,752 + OHPLBJKB_02370 0.58 -0.5
2,480,752 + OHPLBJKB_02370 0.58 -0.3
2,480,752 + OHPLBJKB_02370 0.58 +0.4
2,480,752 + OHPLBJKB_02370 0.58 +0.5
2,480,752 + OHPLBJKB_02370 0.58 +0.4
2,480,752 + OHPLBJKB_02370 0.58 +0.9
2,480,753 - OHPLBJKB_02370 0.58 +0.2
2,480,753 - OHPLBJKB_02370 0.58 -1.0
2,480,753 - OHPLBJKB_02370 0.58 -0.4
2,480,753 - OHPLBJKB_02370 0.58 -0.5
2,480,753 - OHPLBJKB_02370 0.58 +0.6
2,480,753 - OHPLBJKB_02370 0.58 -0.9
2,480,753 - OHPLBJKB_02370 0.58 +1.1
2,480,753 - OHPLBJKB_02370 0.58 +1.1
2,480,762 - OHPLBJKB_02370 0.59 -0.4
2,480,792 + OHPLBJKB_02370 0.63 -0.3
2,480,929 + OHPLBJKB_02370 0.79 +1.2
2,480,930 - OHPLBJKB_02370 0.79 -0.2
2,480,930 - OHPLBJKB_02370 0.79 -0.1
2,480,930 - OHPLBJKB_02370 0.79 +0.2
2,480,963 + OHPLBJKB_02370 0.83 +0.5
2,480,964 - OHPLBJKB_02370 0.83 -1.5
2,481,092 + -0.3
2,481,222 - OHPLBJKB_02371 0.15 -1.8
2,481,222 - OHPLBJKB_02371 0.15 +0.0
2,481,222 - OHPLBJKB_02371 0.15 -0.1
2,481,223 + OHPLBJKB_02371 0.15 -0.9
2,481,223 + OHPLBJKB_02371 0.15 -0.5
2,481,223 + OHPLBJKB_02371 0.15 -0.6
2,481,223 + OHPLBJKB_02371 0.15 +0.3
2,481,224 - OHPLBJKB_02371 0.15 +0.4
2,481,224 - OHPLBJKB_02371 0.15 +1.5
2,481,224 - OHPLBJKB_02371 0.15 +0.1
2,481,224 - OHPLBJKB_02371 0.15 +0.4
2,481,224 - OHPLBJKB_02371 0.15 +0.6
2,481,224 - OHPLBJKB_02371 0.15 -0.1
2,481,224 - OHPLBJKB_02371 0.15 +0.9
2,481,224 - OHPLBJKB_02371 0.15 -0.2
2,481,224 - OHPLBJKB_02371 0.15 +0.8
2,481,224 - OHPLBJKB_02371 0.15 +0.2
2,481,224 - OHPLBJKB_02371 0.15 +1.6
2,481,224 - OHPLBJKB_02371 0.15 +1.4
2,481,257 + OHPLBJKB_02371 0.19 +0.0
2,481,258 - OHPLBJKB_02371 0.19 +0.6
2,481,258 - OHPLBJKB_02371 0.19 +0.4
2,481,276 - OHPLBJKB_02371 0.21 -2.6
2,481,276 - OHPLBJKB_02371 0.21 +0.1
2,481,276 - OHPLBJKB_02371 0.21 +0.1
2,481,276 - OHPLBJKB_02371 0.21 +1.3
2,481,325 - OHPLBJKB_02371 0.27 +0.2
2,481,325 - OHPLBJKB_02371 0.27 +0.4
2,481,325 - OHPLBJKB_02371 0.27 -0.0
2,481,490 - OHPLBJKB_02371 0.45 +0.5
2,481,490 - OHPLBJKB_02371 0.45 +1.1
2,481,558 + OHPLBJKB_02371 0.53 +1.8
2,481,559 - OHPLBJKB_02371 0.53 +0.1
2,481,587 + OHPLBJKB_02371 0.56 +0.4
2,481,622 + OHPLBJKB_02371 0.60 +0.5
2,481,623 - OHPLBJKB_02371 0.60 -1.7
2,481,623 - OHPLBJKB_02371 0.60 +1.4
2,481,627 - OHPLBJKB_02371 0.61 +0.6
2,481,627 - OHPLBJKB_02371 0.61 -1.0
2,481,736 - OHPLBJKB_02371 0.73 +0.9
2,481,794 + OHPLBJKB_02371 0.80 +0.6
2,481,794 + OHPLBJKB_02371 0.80 -0.1
2,481,795 - OHPLBJKB_02371 0.80 -1.6
2,481,795 - OHPLBJKB_02371 0.80 -0.7
2,481,795 - OHPLBJKB_02371 0.80 -0.2
2,481,795 - OHPLBJKB_02371 0.80 -0.2
2,481,795 - OHPLBJKB_02371 0.80 +0.7
2,481,795 - OHPLBJKB_02371 0.80 +0.4
2,481,795 - OHPLBJKB_02371 0.80 +1.1
2,481,847 + OHPLBJKB_02371 0.86 -1.0
2,481,847 + OHPLBJKB_02371 0.86 +0.8
2,481,905 - +0.1
2,481,907 + -1.7
2,481,907 + +0.4
2,482,043 + -0.3
2,482,044 - -0.6
2,482,044 - -0.1
2,482,194 + OHPLBJKB_02372 0.16 +0.7
2,482,211 + OHPLBJKB_02372 0.17 +0.3
2,482,257 - OHPLBJKB_02372 0.20 -0.2
2,482,402 + OHPLBJKB_02372 0.32 +0.8
2,482,482 - OHPLBJKB_02372 0.38 +0.5
2,482,483 + OHPLBJKB_02372 0.38 -0.7
2,482,483 + OHPLBJKB_02372 0.38 +0.1
2,482,483 + OHPLBJKB_02372 0.38 +0.5
2,482,483 + OHPLBJKB_02372 0.38 +1.1
2,482,483 + OHPLBJKB_02372 0.38 +2.1
2,482,483 + OHPLBJKB_02372 0.38 -0.9
2,482,483 + OHPLBJKB_02372 0.38 +0.1
2,482,483 + OHPLBJKB_02372 0.38 -0.5
2,482,483 + OHPLBJKB_02372 0.38 +0.5
2,482,483 + OHPLBJKB_02372 0.38 -0.3
2,482,484 - OHPLBJKB_02372 0.38 -0.4
2,482,484 - OHPLBJKB_02372 0.38 +0.2
2,482,484 - OHPLBJKB_02372 0.38 +0.4
2,482,484 - OHPLBJKB_02372 0.38 -1.1
2,482,484 - OHPLBJKB_02372 0.38 +0.0
2,482,484 - OHPLBJKB_02372 0.38 +0.1
2,482,484 - OHPLBJKB_02372 0.38 -0.3
2,482,521 - OHPLBJKB_02372 0.41 -1.0
2,482,551 - OHPLBJKB_02372 0.43 -0.7
2,482,562 + OHPLBJKB_02372 0.44 -0.1
2,482,562 + OHPLBJKB_02372 0.44 +0.4
2,482,563 - OHPLBJKB_02372 0.44 -1.0
2,482,586 - OHPLBJKB_02372 0.46 +1.8
2,482,588 + OHPLBJKB_02372 0.46 -0.8
2,482,589 - OHPLBJKB_02372 0.46 -0.6
2,482,589 - OHPLBJKB_02372 0.46 +0.5
2,482,616 + OHPLBJKB_02372 0.48 +0.6
2,482,616 + OHPLBJKB_02372 0.48 -0.8
2,482,730 - OHPLBJKB_02372 0.57 -0.4
2,482,901 + OHPLBJKB_02372 0.70 -0.9

Or see this region's nucleotide sequence