Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02294 and OHPLBJKB_02295 are separated by 398 nucleotides OHPLBJKB_02295 and OHPLBJKB_02296 are separated by 71 nucleotides OHPLBJKB_02296 and OHPLBJKB_02297 are separated by 244 nucleotides OHPLBJKB_02297 and OHPLBJKB_02298 are separated by 188 nucleotides
OHPLBJKB_02294: OHPLBJKB_02294 - Methyl-accepting chemotaxis protein III, at 2,388,105 to 2,389,745
_02294
OHPLBJKB_02295: OHPLBJKB_02295 - Toxic protein HokB, at 2,390,144 to 2,390,293
_02295
OHPLBJKB_02296: OHPLBJKB_02296 - hypothetical protein, at 2,390,365 to 2,390,538
_02296
OHPLBJKB_02297: OHPLBJKB_02297 - Cytochrome b561, at 2,390,783 to 2,391,313
_02297
OHPLBJKB_02298: OHPLBJKB_02298 - Glyceraldehyde-3-phosphate dehydrogenase, at 2,391,502 to 2,392,503
_02298
Position (kb)
2390
2391 Strain fitness (log2 ratio)
-2
-1
0
1 at 2389.437 kb on - strand, within OHPLBJKB_02294 at 2389.490 kb on + strand, within OHPLBJKB_02294 at 2389.490 kb on + strand, within OHPLBJKB_02294 at 2389.491 kb on - strand, within OHPLBJKB_02294 at 2389.518 kb on - strand, within OHPLBJKB_02294 at 2389.518 kb on - strand, within OHPLBJKB_02294 at 2389.586 kb on + strand at 2389.644 kb on + strand at 2389.653 kb on + strand at 2389.659 kb on + strand at 2389.659 kb on + strand at 2389.660 kb on - strand at 2389.660 kb on - strand at 2389.739 kb on + strand at 2389.739 kb on + strand at 2389.739 kb on + strand at 2389.740 kb on - strand at 2389.740 kb on - strand at 2389.740 kb on - strand at 2389.803 kb on - strand at 2389.806 kb on + strand at 2389.807 kb on - strand at 2389.850 kb on + strand at 2389.986 kb on + strand at 2389.986 kb on + strand at 2389.987 kb on - strand at 2390.061 kb on + strand at 2390.062 kb on - strand at 2390.068 kb on - strand at 2390.093 kb on + strand at 2390.093 kb on + strand at 2390.094 kb on - strand at 2390.094 kb on - strand at 2390.094 kb on - strand at 2390.094 kb on - strand at 2390.108 kb on + strand at 2390.291 kb on + strand at 2390.292 kb on - strand at 2390.292 kb on - strand at 2390.397 kb on + strand, within OHPLBJKB_02296 at 2390.398 kb on - strand, within OHPLBJKB_02296 at 2390.398 kb on - strand, within OHPLBJKB_02296 at 2390.433 kb on + strand, within OHPLBJKB_02296 at 2390.433 kb on + strand, within OHPLBJKB_02296 at 2390.520 kb on + strand, within OHPLBJKB_02296 at 2390.520 kb on + strand, within OHPLBJKB_02296 at 2390.521 kb on - strand at 2390.521 kb on - strand at 2390.538 kb on + strand at 2390.540 kb on + strand at 2390.540 kb on + strand at 2390.541 kb on - strand at 2390.541 kb on - strand at 2390.541 kb on - strand at 2390.541 kb on - strand at 2390.564 kb on + strand at 2390.564 kb on + strand at 2390.565 kb on - strand at 2390.583 kb on - strand at 2390.584 kb on + strand at 2390.584 kb on + strand at 2390.584 kb on + strand at 2390.584 kb on + strand at 2390.584 kb on + strand at 2390.584 kb on + strand at 2390.584 kb on + strand at 2390.585 kb on - strand at 2390.585 kb on - strand at 2390.585 kb on - strand at 2390.594 kb on + strand at 2390.672 kb on - strand at 2390.698 kb on + strand at 2390.698 kb on + strand at 2390.699 kb on - strand at 2390.699 kb on - strand at 2390.701 kb on - strand at 2390.701 kb on - strand at 2390.719 kb on - strand at 2390.758 kb on + strand at 2390.795 kb on - strand at 2390.810 kb on + strand at 2390.810 kb on + strand at 2390.811 kb on - strand at 2390.811 kb on - strand at 2390.880 kb on + strand, within OHPLBJKB_02297 at 2390.916 kb on - strand, within OHPLBJKB_02297 at 2390.920 kb on + strand, within OHPLBJKB_02297 at 2390.920 kb on + strand, within OHPLBJKB_02297 at 2390.920 kb on + strand, within OHPLBJKB_02297 at 2390.920 kb on + strand, within OHPLBJKB_02297 at 2390.920 kb on + strand, within OHPLBJKB_02297 at 2390.921 kb on - strand, within OHPLBJKB_02297 at 2390.921 kb on - strand, within OHPLBJKB_02297 at 2390.953 kb on - strand, within OHPLBJKB_02297 at 2390.997 kb on + strand, within OHPLBJKB_02297 at 2390.997 kb on + strand, within OHPLBJKB_02297 at 2390.997 kb on + strand, within OHPLBJKB_02297 at 2390.997 kb on + strand, within OHPLBJKB_02297 at 2390.998 kb on - strand, within OHPLBJKB_02297 at 2390.998 kb on - strand, within OHPLBJKB_02297 at 2390.998 kb on - strand, within OHPLBJKB_02297 at 2390.998 kb on - strand, within OHPLBJKB_02297 at 2391.032 kb on - strand, within OHPLBJKB_02297 at 2391.043 kb on - strand, within OHPLBJKB_02297 at 2391.094 kb on + strand, within OHPLBJKB_02297 at 2391.094 kb on + strand, within OHPLBJKB_02297 at 2391.094 kb on + strand, within OHPLBJKB_02297 at 2391.094 kb on + strand, within OHPLBJKB_02297 at 2391.098 kb on + strand, within OHPLBJKB_02297 at 2391.099 kb on - strand, within OHPLBJKB_02297 at 2391.099 kb on - strand, within OHPLBJKB_02297 at 2391.099 kb on - strand, within OHPLBJKB_02297 at 2391.100 kb on + strand, within OHPLBJKB_02297 at 2391.118 kb on - strand, within OHPLBJKB_02297 at 2391.209 kb on - strand, within OHPLBJKB_02297 at 2391.244 kb on - strand, within OHPLBJKB_02297 at 2391.333 kb on + strand at 2391.378 kb on + strand at 2391.378 kb on + strand at 2391.399 kb on - strand at 2391.450 kb on + strand at 2391.508 kb on - strand at 2391.516 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,389,437 - OHPLBJKB_02294 0.81 +0.1 2,389,490 + OHPLBJKB_02294 0.84 -0.4 2,389,490 + OHPLBJKB_02294 0.84 -0.8 2,389,491 - OHPLBJKB_02294 0.84 +0.4 2,389,518 - OHPLBJKB_02294 0.86 -0.1 2,389,518 - OHPLBJKB_02294 0.86 -0.5 2,389,586 + -1.5 2,389,644 + +0.4 2,389,653 + -0.1 2,389,659 + -1.9 2,389,659 + +0.1 2,389,660 - -0.8 2,389,660 - +1.5 2,389,739 + +0.9 2,389,739 + -0.5 2,389,739 + +0.4 2,389,740 - +0.8 2,389,740 - +0.2 2,389,740 - +0.8 2,389,803 - +0.5 2,389,806 + +1.7 2,389,807 - +0.3 2,389,850 + -0.7 2,389,986 + +0.9 2,389,986 + +0.5 2,389,987 - -0.3 2,390,061 + +1.0 2,390,062 - +0.1 2,390,068 - -0.1 2,390,093 + +0.2 2,390,093 + +1.2 2,390,094 - -1.6 2,390,094 - +0.4 2,390,094 - -2.0 2,390,094 - +0.1 2,390,108 + +0.6 2,390,291 + -0.6 2,390,292 - -0.4 2,390,292 - -0.1 2,390,397 + OHPLBJKB_02296 0.18 -1.0 2,390,398 - OHPLBJKB_02296 0.19 -0.9 2,390,398 - OHPLBJKB_02296 0.19 +0.1 2,390,433 + OHPLBJKB_02296 0.39 -0.2 2,390,433 + OHPLBJKB_02296 0.39 -0.2 2,390,520 + OHPLBJKB_02296 0.89 -0.6 2,390,520 + OHPLBJKB_02296 0.89 -1.8 2,390,521 - +0.1 2,390,521 - -0.0 2,390,538 + +0.1 2,390,540 + -1.2 2,390,540 + +0.1 2,390,541 - -0.0 2,390,541 - +0.3 2,390,541 - -0.7 2,390,541 - -0.0 2,390,564 + +0.5 2,390,564 + +0.4 2,390,565 - +0.2 2,390,583 - +0.6 2,390,584 + -1.0 2,390,584 + -0.4 2,390,584 + -1.0 2,390,584 + -0.3 2,390,584 + -0.3 2,390,584 + -0.1 2,390,584 + -0.6 2,390,585 - +0.2 2,390,585 - +0.8 2,390,585 - +0.2 2,390,594 + +0.7 2,390,672 - -0.5 2,390,698 + -0.2 2,390,698 + +0.6 2,390,699 - -0.1 2,390,699 - +0.9 2,390,701 - -0.6 2,390,701 - -0.1 2,390,719 - -0.0 2,390,758 + -0.9 2,390,795 - -0.7 2,390,810 + +0.8 2,390,810 + +0.0 2,390,811 - +0.8 2,390,811 - +0.9 2,390,880 + OHPLBJKB_02297 0.18 +1.3 2,390,916 - OHPLBJKB_02297 0.25 -0.6 2,390,920 + OHPLBJKB_02297 0.26 -1.7 2,390,920 + OHPLBJKB_02297 0.26 -0.8 2,390,920 + OHPLBJKB_02297 0.26 -0.1 2,390,920 + OHPLBJKB_02297 0.26 -1.2 2,390,920 + OHPLBJKB_02297 0.26 -0.2 2,390,921 - OHPLBJKB_02297 0.26 +0.8 2,390,921 - OHPLBJKB_02297 0.26 +1.0 2,390,953 - OHPLBJKB_02297 0.32 +0.1 2,390,997 + OHPLBJKB_02297 0.40 +1.0 2,390,997 + OHPLBJKB_02297 0.40 -1.9 2,390,997 + OHPLBJKB_02297 0.40 -0.4 2,390,997 + OHPLBJKB_02297 0.40 -0.8 2,390,998 - OHPLBJKB_02297 0.40 +0.4 2,390,998 - OHPLBJKB_02297 0.40 -0.7 2,390,998 - OHPLBJKB_02297 0.40 -0.4 2,390,998 - OHPLBJKB_02297 0.40 +0.4 2,391,032 - OHPLBJKB_02297 0.47 -0.4 2,391,043 - OHPLBJKB_02297 0.49 -0.6 2,391,094 + OHPLBJKB_02297 0.59 -2.2 2,391,094 + OHPLBJKB_02297 0.59 +0.3 2,391,094 + OHPLBJKB_02297 0.59 +0.4 2,391,094 + OHPLBJKB_02297 0.59 -0.2 2,391,098 + OHPLBJKB_02297 0.59 +1.5 2,391,099 - OHPLBJKB_02297 0.60 -1.1 2,391,099 - OHPLBJKB_02297 0.60 -0.0 2,391,099 - OHPLBJKB_02297 0.60 +0.7 2,391,100 + OHPLBJKB_02297 0.60 -0.0 2,391,118 - OHPLBJKB_02297 0.63 -0.6 2,391,209 - OHPLBJKB_02297 0.80 +0.1 2,391,244 - OHPLBJKB_02297 0.87 +0.4 2,391,333 + +0.2 2,391,378 + -0.9 2,391,378 + +0.5 2,391,399 - +0.0 2,391,450 + +0.8 2,391,508 - -2.4 2,391,516 + +0.6
Or see this region's nucleotide sequence