Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01206 and OHPLBJKB_01207 are separated by 206 nucleotides OHPLBJKB_01207 and OHPLBJKB_01208 are separated by 6 nucleotides OHPLBJKB_01208 and OHPLBJKB_01209 are separated by 10 nucleotides
OHPLBJKB_01206: OHPLBJKB_01206 - hypothetical protein, at 1,244,466 to 1,245,806
_01206
OHPLBJKB_01207: OHPLBJKB_01207 - hypothetical protein, at 1,246,013 to 1,246,243
_01207
OHPLBJKB_01208: OHPLBJKB_01208 - hypothetical protein, at 1,246,250 to 1,247,161
_01208
OHPLBJKB_01209: OHPLBJKB_01209 - IS1 family transposase IS1S, at 1,247,172 to 1,247,438
_01209
Position (kb)
1246
1247 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1245.090 kb on + strand, within OHPLBJKB_01206 at 1245.096 kb on - strand, within OHPLBJKB_01206 at 1245.101 kb on + strand, within OHPLBJKB_01206 at 1245.102 kb on - strand, within OHPLBJKB_01206 at 1245.112 kb on + strand, within OHPLBJKB_01206 at 1245.238 kb on - strand, within OHPLBJKB_01206 at 1245.240 kb on + strand, within OHPLBJKB_01206 at 1245.240 kb on + strand, within OHPLBJKB_01206 at 1245.285 kb on - strand, within OHPLBJKB_01206 at 1245.492 kb on - strand, within OHPLBJKB_01206 at 1245.497 kb on + strand, within OHPLBJKB_01206 at 1245.672 kb on + strand, within OHPLBJKB_01206 at 1245.672 kb on + strand, within OHPLBJKB_01206 at 1245.752 kb on + strand at 1245.753 kb on - strand at 1245.753 kb on - strand at 1245.757 kb on + strand at 1245.758 kb on - strand at 1245.758 kb on - strand at 1245.766 kb on - strand at 1245.766 kb on - strand at 1245.777 kb on + strand at 1245.777 kb on + strand at 1245.778 kb on - strand at 1245.778 kb on - strand at 1245.800 kb on - strand at 1245.823 kb on - strand at 1245.825 kb on - strand at 1245.842 kb on + strand at 1245.856 kb on + strand at 1245.856 kb on + strand at 1245.882 kb on - strand at 1245.934 kb on + strand at 1246.030 kb on + strand at 1246.030 kb on + strand at 1246.031 kb on - strand at 1246.031 kb on - strand at 1246.031 kb on - strand at 1246.031 kb on - strand at 1246.031 kb on - strand at 1246.039 kb on - strand, within OHPLBJKB_01207 at 1246.043 kb on - strand, within OHPLBJKB_01207 at 1246.049 kb on - strand, within OHPLBJKB_01207 at 1246.091 kb on + strand, within OHPLBJKB_01207 at 1246.091 kb on + strand, within OHPLBJKB_01207 at 1246.092 kb on - strand, within OHPLBJKB_01207 at 1246.094 kb on - strand, within OHPLBJKB_01207 at 1246.126 kb on + strand, within OHPLBJKB_01207 at 1246.127 kb on - strand, within OHPLBJKB_01207 at 1246.229 kb on - strand at 1246.269 kb on + strand at 1246.372 kb on + strand, within OHPLBJKB_01208 at 1246.373 kb on - strand, within OHPLBJKB_01208 at 1246.499 kb on - strand, within OHPLBJKB_01208 at 1246.762 kb on + strand, within OHPLBJKB_01208 at 1246.921 kb on - strand, within OHPLBJKB_01208 at 1246.995 kb on + strand, within OHPLBJKB_01208 at 1246.995 kb on + strand, within OHPLBJKB_01208 at 1246.996 kb on - strand, within OHPLBJKB_01208 at 1246.997 kb on + strand, within OHPLBJKB_01208 at 1246.998 kb on - strand, within OHPLBJKB_01208 at 1247.081 kb on - strand at 1247.081 kb on - strand at 1247.081 kb on - strand at 1247.136 kb on + strand at 1247.136 kb on + strand at 1247.188 kb on - strand at 1247.188 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 1,245,090 + OHPLBJKB_01206 0.47 -1.4 1,245,096 - OHPLBJKB_01206 0.47 +0.0 1,245,101 + OHPLBJKB_01206 0.47 -1.1 1,245,102 - OHPLBJKB_01206 0.47 -0.1 1,245,112 + OHPLBJKB_01206 0.48 -0.4 1,245,238 - OHPLBJKB_01206 0.58 -0.1 1,245,240 + OHPLBJKB_01206 0.58 -0.5 1,245,240 + OHPLBJKB_01206 0.58 -0.1 1,245,285 - OHPLBJKB_01206 0.61 -0.1 1,245,492 - OHPLBJKB_01206 0.77 -0.7 1,245,497 + OHPLBJKB_01206 0.77 -0.8 1,245,672 + OHPLBJKB_01206 0.90 +0.3 1,245,672 + OHPLBJKB_01206 0.90 +0.4 1,245,752 + +0.5 1,245,753 - +0.0 1,245,753 - +0.3 1,245,757 + +0.3 1,245,758 - -0.0 1,245,758 - -0.6 1,245,766 - +1.8 1,245,766 - -0.7 1,245,777 + +0.1 1,245,777 + +0.8 1,245,778 - -0.7 1,245,778 - -0.5 1,245,800 - -3.0 1,245,823 - +0.0 1,245,825 - -1.1 1,245,842 + -0.1 1,245,856 + -0.4 1,245,856 + +0.3 1,245,882 - +1.2 1,245,934 + +0.6 1,246,030 + -0.2 1,246,030 + -0.3 1,246,031 - +0.1 1,246,031 - -0.7 1,246,031 - +2.9 1,246,031 - -0.9 1,246,031 - -0.2 1,246,039 - OHPLBJKB_01207 0.11 -0.6 1,246,043 - OHPLBJKB_01207 0.13 +0.1 1,246,049 - OHPLBJKB_01207 0.16 +1.6 1,246,091 + OHPLBJKB_01207 0.34 -0.6 1,246,091 + OHPLBJKB_01207 0.34 +1.0 1,246,092 - OHPLBJKB_01207 0.34 +0.6 1,246,094 - OHPLBJKB_01207 0.35 +0.8 1,246,126 + OHPLBJKB_01207 0.49 +0.5 1,246,127 - OHPLBJKB_01207 0.49 -0.7 1,246,229 - -0.9 1,246,269 + -1.1 1,246,372 + OHPLBJKB_01208 0.13 +0.2 1,246,373 - OHPLBJKB_01208 0.13 -0.3 1,246,499 - OHPLBJKB_01208 0.27 +0.1 1,246,762 + OHPLBJKB_01208 0.56 +1.3 1,246,921 - OHPLBJKB_01208 0.74 -1.1 1,246,995 + OHPLBJKB_01208 0.82 -2.1 1,246,995 + OHPLBJKB_01208 0.82 +0.2 1,246,996 - OHPLBJKB_01208 0.82 +0.0 1,246,997 + OHPLBJKB_01208 0.82 -0.6 1,246,998 - OHPLBJKB_01208 0.82 -3.0 1,247,081 - +0.3 1,247,081 - -1.3 1,247,081 - -1.6 1,247,136 + +0.8 1,247,136 + -0.2 1,247,188 - +0.4 1,247,188 - -0.3
Or see this region's nucleotide sequence