Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06325

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
88,025	+				-1.1
88,025	+				+0.1
88,026	-				-1.7
88,026	-				-0.7
88,029	-				+0.1
88,054	+				-0.3
88,054	+				+0.6
88,054	+				+0.3
88,054	+				-0.0
88,055	-				-0.3
88,055	-				-0.7
88,055	-				-1.2
88,055	-				+0.6
88,055	-				-1.2
88,132	+				-0.2
88,132	+				-0.0
88,133	-				+2.1
88,133	-				-1.2
88,133	-				+0.6
88,133	-				-1.2
88,133	-				+0.1
88,133	-				+0.3
88,133	-				+1.0
88,159	+				+0.6
88,160	-				+0.1
88,179	+				-0.1
88,179	+				+0.2
88,179	+				-1.2
88,179	+				-0.1
88,179	+				+0.6
88,179	+				-0.7
88,179	+				-1.0
88,179	+				-0.8
88,179	+				+0.6
88,179	+				-0.7
88,179	+				+1.1
88,179	+				-0.7
88,179	+				+0.3
88,179	+				-1.4
88,179	+				-1.5
88,179	+				-0.5
88,179	+				-0.9
88,179	+				-0.7
88,179	+				-0.1
88,179	+				+1.3
88,179	+				-1.5
88,179	+				+1.2
88,179	+				+0.2
88,179	+				-0.8
88,179	+				-0.5
88,179	+				-2.4
88,179	+				-0.9
88,179	+				+0.4
88,179	+				-2.2
88,179	+				-1.0
88,180	-				-1.2
88,180	-				-0.5
88,180	-				-1.4
88,180	-				+0.8
88,180	-				-0.4
88,180	-				-0.1
88,180	-				-0.2
88,180	-				+0.6
88,180	-				+0.1
88,180	-				+0.9
88,180	-				-1.2
88,180	-				-0.9
88,180	-				-0.7
88,180	-				-0.4
88,180	-				-0.2
88,180	-				-1.0
88,180	-				-1.2
88,180	-				+0.3
88,180	-				-0.5
88,180	-				+0.9
88,180	-				+0.2
88,180	-				-0.9
88,180	-				+0.1
88,180	-				-1.2
88,180	-				+0.2
88,180	-				+0.1
88,180	-				-1.9
88,180	-				-0.8
88,180	-				-1.0
88,180	-				-0.8
88,180	-				+0.8
88,180	-				-0.2
88,180	-				-1.1
88,180	-				+0.3
88,180	-				-2.4
88,180	-				+0.9
88,180	-				-0.9
88,180	-				+0.3
88,180	-				+1.0
88,180	-				-1.9
88,200	+				+0.2
88,201	-				+0.2
88,201	-				-1.3
88,250	+				-0.7
88,250	+				-3.2
88,251	-				-1.4
88,331	+		MPMX19_06324	0.17	-0.3
88,331	+		MPMX19_06324	0.17	-1.2
88,331	+		MPMX19_06324	0.17	-2.3
88,332	-		MPMX19_06324	0.17	-0.9
88,332	-		MPMX19_06324	0.17	+1.6
88,452	+		MPMX19_06324	0.32	+0.1
88,485	+		MPMX19_06324	0.36	+0.1
88,485	+		MPMX19_06324	0.36	+0.8
88,485	+		MPMX19_06324	0.36	+0.8
88,485	+		MPMX19_06324	0.36	+0.1
88,485	+		MPMX19_06324	0.36	-0.7
88,485	+		MPMX19_06324	0.36	+0.9
88,486	-		MPMX19_06324	0.36	-0.9
88,508	+		MPMX19_06324	0.39	-1.1
88,508	+		MPMX19_06324	0.39	-0.5
88,508	+		MPMX19_06324	0.39	-1.4
88,508	+		MPMX19_06324	0.39	+1.6
88,508	+		MPMX19_06324	0.39	+0.0
88,509	-		MPMX19_06324	0.39	+0.1
88,509	-		MPMX19_06324	0.39	-1.5
88,509	-		MPMX19_06324	0.39	-1.5
88,530	+		MPMX19_06324	0.42	-0.0
88,530	+		MPMX19_06324	0.42	-1.8
88,531	-		MPMX19_06324	0.42	-0.5
88,626	+		MPMX19_06324	0.54	-0.3
88,626	+		MPMX19_06324	0.54	-1.7
88,626	+		MPMX19_06324	0.54	+1.6
88,626	+		MPMX19_06324	0.54	+0.4
88,627	-		MPMX19_06324	0.54	+1.0
88,627	-		MPMX19_06324	0.54	+0.8
88,627	-		MPMX19_06324	0.54	+0.2
88,627	-		MPMX19_06324	0.54	-0.7
88,627	-		MPMX19_06324	0.54	-0.2
88,627	-		MPMX19_06324	0.54	-0.7
88,627	-		MPMX19_06324	0.54	-2.2
88,627	-		MPMX19_06324	0.54	-1.4
88,627	-		MPMX19_06324	0.54	-1.8
88,627	-		MPMX19_06324	0.54	-2.4
88,727	+		MPMX19_06324	0.67	-0.7
88,728	-		MPMX19_06324	0.67	+0.6
88,728	-		MPMX19_06324	0.67	-2.6
88,759	+		MPMX19_06324	0.71	-0.8
88,759	+		MPMX19_06324	0.71	+0.5
88,759	+		MPMX19_06324	0.71	-1.4
88,760	-		MPMX19_06324	0.71	-0.4
88,797	+		MPMX19_06324	0.76	-1.1
88,797	+		MPMX19_06324	0.76	-0.5
88,797	+		MPMX19_06324	0.76	-1.2
88,797	+		MPMX19_06324	0.76	+1.0
88,797	+		MPMX19_06324	0.76	+0.3
88,797	+		MPMX19_06324	0.76	+1.0
88,797	+		MPMX19_06324	0.76	-1.2
88,797	+		MPMX19_06324	0.76	-0.0
88,797	+		MPMX19_06324	0.76	-0.4
88,797	+		MPMX19_06324	0.76	-0.1
88,797	+		MPMX19_06324	0.76	+2.0
88,797	+		MPMX19_06324	0.76	-1.7
88,798	-		MPMX19_06324	0.76	-1.2
88,798	-		MPMX19_06324	0.76	-0.4
88,798	-		MPMX19_06324	0.76	-1.5
88,798	-		MPMX19_06324	0.76	+0.7
88,798	-		MPMX19_06324	0.76	-1.0
88,798	-		MPMX19_06324	0.76	-0.4
88,798	-		MPMX19_06324	0.76	-0.1
88,798	-		MPMX19_06324	0.76	-0.8
88,798	-		MPMX19_06324	0.76	-0.6
88,799	+		MPMX19_06324	0.76	-0.4
88,799	+		MPMX19_06324	0.76	+1.1
88,799	+		MPMX19_06324	0.76	-1.3
88,799	+		MPMX19_06324	0.76	+0.8
88,799	+		MPMX19_06324	0.76	-0.4
88,799	+		MPMX19_06324	0.76	+0.3
88,800	-		MPMX19_06324	0.76	-1.4
88,800	-		MPMX19_06324	0.76	+0.6
88,800	-		MPMX19_06324	0.76	+1.6
88,824	+		MPMX19_06324	0.79	+0.1
88,825	-		MPMX19_06324	0.79	+0.1
88,840	+		MPMX19_06324	0.81	-0.9
88,840	+		MPMX19_06324	0.81	-0.2
88,840	+		MPMX19_06324	0.81	-1.9
88,840	+		MPMX19_06324	0.81	-0.1
88,841	-		MPMX19_06324	0.81	+0.4
88,841	-		MPMX19_06324	0.81	+1.2
88,841	-		MPMX19_06324	0.81	-1.2
89,027	+				+0.5
89,027	+				+1.4
89,027	+				-0.7
89,163	+				+0.6
89,163	+				-1.4
89,163	+				-0.4
89,163	+				+0.1
89,164	-				-1.7
89,164	-				-0.4
89,164	-				+0.1
89,164	-				-0.7
89,164	-				+0.1
89,283	-		MPMX19_06325	0.10	+0.1
89,283	-		MPMX19_06325	0.10	-1.0
89,427	+		MPMX19_06325	0.15	+1.1
89,602	+		MPMX19_06325	0.21	-0.9
89,602	+		MPMX19_06325	0.21	-1.2
89,602	+		MPMX19_06325	0.21	+0.1
89,602	+		MPMX19_06325	0.21	-0.8
89,602	+		MPMX19_06325	0.21	+1.6
89,602	+		MPMX19_06325	0.21	-1.0
89,603	-		MPMX19_06325	0.21	-1.8
89,603	-		MPMX19_06325	0.21	+0.1
89,603	-		MPMX19_06325	0.21	-0.9
89,603	-		MPMX19_06325	0.21	-0.4
89,603	-		MPMX19_06325	0.21	-1.4
89,603	-		MPMX19_06325	0.21	+0.4
89,620	+		MPMX19_06325	0.22	-0.7
89,621	-		MPMX19_06325	0.22	+0.8
89,682	-		MPMX19_06325	0.24	-0.4
89,734	+		MPMX19_06325	0.25	-0.5
89,734	+		MPMX19_06325	0.25	+0.8
89,735	-		MPMX19_06325	0.25	-0.4
90,021	+		MPMX19_06325	0.35	-0.2
90,021	+		MPMX19_06325	0.35	-0.1
90,021	+		MPMX19_06325	0.35	+0.4
90,022	-		MPMX19_06325	0.35	+0.2
90,155	+		MPMX19_06325	0.40	-0.1
90,376	+		MPMX19_06325	0.47	+0.2
90,376	+		MPMX19_06325	0.47	-1.4
90,377	-		MPMX19_06325	0.47	-1.2
90,377	-		MPMX19_06325	0.47	+0.3
90,398	+		MPMX19_06325	0.48	-0.0
90,452	-		MPMX19_06325	0.50	+1.1
90,470	+		MPMX19_06325	0.50	-0.1
90,471	-		MPMX19_06325	0.50	-1.5
90,558	+		MPMX19_06325	0.53	-1.8
90,648	+		MPMX19_06325	0.56	-0.5
90,648	+		MPMX19_06325	0.56	-0.7
90,649	-		MPMX19_06325	0.56	-0.5
90,662	+		MPMX19_06325	0.57	-0.5
90,662	+		MPMX19_06325	0.57	-0.6
90,680	+		MPMX19_06325	0.57	-1.8
90,680	+		MPMX19_06325	0.57	-1.4
90,680	+		MPMX19_06325	0.57	-1.5
90,680	+		MPMX19_06325	0.57	-0.7
90,680	+		MPMX19_06325	0.57	-1.1
90,680	+		MPMX19_06325	0.57	-0.9
90,911	+		MPMX19_06325	0.65	-0.4
90,911	+		MPMX19_06325	0.65	+0.2
90,911	+		MPMX19_06325	0.65	-0.4
90,911	+		MPMX19_06325	0.65	-0.8
90,912	-		MPMX19_06325	0.65	-1.7
90,912	-		MPMX19_06325	0.65	-1.4
90,936	-		MPMX19_06325	0.66	-0.6
90,992	+		MPMX19_06325	0.68	-0.5
90,992	+		MPMX19_06325	0.68	-0.7
90,993	-		MPMX19_06325	0.68	-1.2
91,029	-		MPMX19_06325	0.69	+0.1
91,039	+		MPMX19_06325	0.70	+0.4
91,039	+		MPMX19_06325	0.70	-2.8
91,039	+		MPMX19_06325	0.70	-0.9
91,039	+		MPMX19_06325	0.70	-1.8
91,039	+		MPMX19_06325	0.70	+1.1
91,040	-		MPMX19_06325	0.70	-1.8
91,049	+		MPMX19_06325	0.70	+1.5
91,049	+		MPMX19_06325	0.70	-0.4
91,050	-		MPMX19_06325	0.70	+0.4
91,106	-		MPMX19_06325	0.72	+1.0
91,303	+		MPMX19_06325	0.79	+1.3
91,343	+		MPMX19_06325	0.80	+1.1
91,343	+		MPMX19_06325	0.80	-0.4
91,343	+		MPMX19_06325	0.80	-0.7
91,344	-		MPMX19_06325	0.80	-0.9
91,344	-		MPMX19_06325	0.80	+0.1
91,344	-		MPMX19_06325	0.80	-3.2
91,344	-		MPMX19_06325	0.80	+0.6
91,344	-		MPMX19_06325	0.80	-0.4
91,344	-		MPMX19_06325	0.80	-0.2
91,344	-		MPMX19_06325	0.80	-1.3
91,349	+		MPMX19_06325	0.80	+0.9
91,350	-		MPMX19_06325	0.80	-0.4
91,350	-		MPMX19_06325	0.80	-0.9
91,351	+		MPMX19_06325	0.80	+0.9
91,351	+		MPMX19_06325	0.80	-1.7
91,351	+		MPMX19_06325	0.80	+0.3
91,351	+		MPMX19_06325	0.80	+0.4
91,351	+		MPMX19_06325	0.80	+1.3
91,351	+		MPMX19_06325	0.80	-1.7
91,351	+		MPMX19_06325	0.80	-0.9
91,351	+		MPMX19_06325	0.80	+0.1
91,351	+		MPMX19_06325	0.80	-1.8
91,351	+		MPMX19_06325	0.80	-0.4
91,351	+		MPMX19_06325	0.80	+0.1
91,352	-		MPMX19_06325	0.80	+0.1
91,352	-		MPMX19_06325	0.80	-1.5
91,352	-		MPMX19_06325	0.80	-1.9
91,352	-		MPMX19_06325	0.80	-2.2
91,429	-		MPMX19_06325	0.83	-0.7
91,715	+				-0.6
91,715	+				+0.9
91,716	-				-0.6
91,716	-				-1.4
91,716	-				-0.4
91,961	+				+0.9
91,962	-				-0.8
91,962	-				-0.5
91,969	+				-1.2
91,970	-				-1.4
91,970	-				-0.3
91,970	-				-1.1
91,971	+				+0.1
92,059	+				+1.2
92,060	-				+0.1
92,060	-				-0.8
92,060	-				-1.5
92,060	-				-0.1
92,095	-				-1.2
92,115	+				-0.0
92,115	+				-0.2
92,193	+				-0.4
92,193	+				-0.4
92,193	+				-2.2
92,193	+				-0.4
92,194	-				-0.9
92,194	-				+1.1
92,194	-				-1.8
92,194	-				-1.5
92,194	-				+1.5
92,194	-				+0.1
92,200	+				+0.1
92,200	+				-0.5
92,201	-				-0.8
92,201	-				-1.2
92,243	+		MPMX19_06326	0.13	-1.1
92,243	+		MPMX19_06326	0.13	+1.6
92,243	+		MPMX19_06326	0.13	+0.3
92,244	-		MPMX19_06326	0.13	-1.5
92,244	-		MPMX19_06326	0.13	-1.4
92,244	-		MPMX19_06326	0.13	+1.2
92,244	-		MPMX19_06326	0.13	-0.5
92,358	+		MPMX19_06326	0.28	-1.3
92,359	-		MPMX19_06326	0.28	+0.8
92,359	-		MPMX19_06326	0.28	+0.6
92,359	-		MPMX19_06326	0.28	+1.9
92,780	+		MPMX19_06326	0.85	-1.4
92,919	+				-0.2