Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01981

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
2,062,724	+				-0.5
2,062,725	-				-2.5
2,062,794	+				-1.8
2,062,794	+				-0.3
2,062,795	-				+0.4
2,063,096	-		MPMX19_01980	0.54	-0.5
2,063,096	-		MPMX19_01980	0.54	-0.8
2,063,096	-		MPMX19_01980	0.54	+0.3
2,063,096	-		MPMX19_01980	0.54	-1.5
2,063,185	-		MPMX19_01980	0.70	-0.6
2,063,370	-				+0.2
2,063,370	-				+1.2
2,063,399	+				+0.3
2,063,450	-				+0.2
2,063,581	+				+0.2
2,063,581	+				+0.8
2,063,581	+				+0.4
2,063,581	+				+0.2
2,063,582	-				+0.5
2,063,582	-				-0.0
2,063,582	-				-0.6
2,063,582	-				-0.0
2,063,582	-				-2.3
2,063,636	+				+0.3
2,063,636	+				+0.5
2,063,637	-				+0.4
2,063,637	-				-0.2
2,063,645	+				-0.9
2,063,645	+				-0.0
2,063,645	+				+0.1
2,063,646	-				-1.8
2,063,646	-				+0.5
2,063,646	-				+0.5
2,063,666	+				-1.3
2,063,666	+				-0.5
2,063,667	-				-0.0
2,063,810	+		MPMX19_01981	0.18	-0.1
2,063,810	+		MPMX19_01981	0.18	+1.5
2,063,810	+		MPMX19_01981	0.18	+0.3
2,063,810	+		MPMX19_01981	0.18	-0.5
2,063,810	+		MPMX19_01981	0.18	-0.7
2,063,810	+		MPMX19_01981	0.18	-0.4
2,063,810	+		MPMX19_01981	0.18	+0.0
2,063,810	+		MPMX19_01981	0.18	-0.0
2,063,810	+		MPMX19_01981	0.18	-0.7
2,063,810	+		MPMX19_01981	0.18	-1.5
2,063,810	+		MPMX19_01981	0.18	+0.7
2,063,810	+		MPMX19_01981	0.18	-0.7
2,063,810	+		MPMX19_01981	0.18	+0.3
2,063,811	-		MPMX19_01981	0.18	-1.2
2,063,811	-		MPMX19_01981	0.18	-0.9
2,063,811	-		MPMX19_01981	0.18	+0.4
2,063,811	-		MPMX19_01981	0.18	-0.0
2,063,811	-		MPMX19_01981	0.18	-0.0
2,063,811	-		MPMX19_01981	0.18	-0.0
2,063,811	-		MPMX19_01981	0.18	+1.1
2,063,811	-		MPMX19_01981	0.18	+1.1
2,063,828	+		MPMX19_01981	0.20	-0.5
2,063,828	+		MPMX19_01981	0.20	-1.6
2,063,828	+		MPMX19_01981	0.20	-2.3
2,063,828	+		MPMX19_01981	0.20	-0.2
2,063,828	+		MPMX19_01981	0.20	+0.3
2,063,828	+		MPMX19_01981	0.20	+1.1
2,063,828	+		MPMX19_01981	0.20	+0.4
2,063,828	+		MPMX19_01981	0.20	+0.5
2,063,828	+		MPMX19_01981	0.20	+0.2
2,063,828	+		MPMX19_01981	0.20	-1.6
2,063,828	+		MPMX19_01981	0.20	+0.0
2,063,828	+		MPMX19_01981	0.20	+0.3
2,063,828	+		MPMX19_01981	0.20	+0.4
2,063,828	+		MPMX19_01981	0.20	-1.1
2,063,828	+		MPMX19_01981	0.20	-0.2
2,063,828	+		MPMX19_01981	0.20	-1.0
2,063,829	-		MPMX19_01981	0.20	-1.7
2,063,829	-		MPMX19_01981	0.20	-1.9
2,063,829	-		MPMX19_01981	0.20	-0.8
2,063,829	-		MPMX19_01981	0.20	-0.3
2,063,829	-		MPMX19_01981	0.20	-0.3
2,063,829	-		MPMX19_01981	0.20	-0.6
2,063,829	-		MPMX19_01981	0.20	-0.9
2,063,829	-		MPMX19_01981	0.20	-0.8
2,063,829	-		MPMX19_01981	0.20	+0.3
2,063,829	-		MPMX19_01981	0.20	-0.2
2,063,829	-		MPMX19_01981	0.20	-0.5
2,063,829	-		MPMX19_01981	0.20	-0.5
2,063,840	+		MPMX19_01981	0.21	-2.3
2,063,840	+		MPMX19_01981	0.21	+0.2
2,063,840	+		MPMX19_01981	0.21	+0.5
2,063,840	+		MPMX19_01981	0.21	-0.9
2,063,840	+		MPMX19_01981	0.21	+0.2
2,063,840	+		MPMX19_01981	0.21	-2.4
2,063,840	+		MPMX19_01981	0.21	-1.1
2,063,840	+		MPMX19_01981	0.21	+0.3
2,063,840	+		MPMX19_01981	0.21	-1.1
2,063,840	+		MPMX19_01981	0.21	-0.4
2,063,840	+		MPMX19_01981	0.21	+0.5
2,063,840	+		MPMX19_01981	0.21	-0.0
2,063,840	+		MPMX19_01981	0.21	-1.0
2,063,840	+		MPMX19_01981	0.21	-1.4
2,063,841	-		MPMX19_01981	0.21	-1.0
2,063,841	-		MPMX19_01981	0.21	-1.8
2,063,841	-		MPMX19_01981	0.21	+0.6
2,063,841	-		MPMX19_01981	0.21	-2.3
2,063,841	-		MPMX19_01981	0.21	-0.6
2,063,841	-		MPMX19_01981	0.21	-1.2
2,063,841	-		MPMX19_01981	0.21	-1.1
2,063,841	-		MPMX19_01981	0.21	-0.5
2,063,918	+		MPMX19_01981	0.28	-2.6
2,063,918	+		MPMX19_01981	0.28	-1.5
2,063,918	+		MPMX19_01981	0.28	-1.1
2,063,918	+		MPMX19_01981	0.28	-0.5
2,063,919	-		MPMX19_01981	0.28	-1.5
2,063,919	-		MPMX19_01981	0.28	-0.8
2,063,919	-		MPMX19_01981	0.28	+0.5
2,063,919	-		MPMX19_01981	0.28	+0.3
2,063,919	-		MPMX19_01981	0.28	-0.9
2,063,919	-		MPMX19_01981	0.28	+0.5
2,063,919	-		MPMX19_01981	0.28	+0.5
2,063,919	-		MPMX19_01981	0.28	-0.4
2,063,919	-		MPMX19_01981	0.28	-0.3
2,063,919	-		MPMX19_01981	0.28	-0.6
2,063,970	+		MPMX19_01981	0.33	+0.1
2,063,970	+		MPMX19_01981	0.33	-0.5
2,063,970	+		MPMX19_01981	0.33	-0.5
2,064,107	+		MPMX19_01981	0.45	+0.1
2,064,107	+		MPMX19_01981	0.45	-1.5
2,064,107	+		MPMX19_01981	0.45	-1.5
2,064,107	+		MPMX19_01981	0.45	+0.1
2,064,107	+		MPMX19_01981	0.45	-0.7
2,064,108	-		MPMX19_01981	0.45	+1.1
2,064,108	-		MPMX19_01981	0.45	-1.0
2,064,108	-		MPMX19_01981	0.45	+1.0
2,064,108	-		MPMX19_01981	0.45	-1.5
2,064,108	-		MPMX19_01981	0.45	+1.2
2,064,108	-		MPMX19_01981	0.45	-2.0
2,064,108	-		MPMX19_01981	0.45	-0.0
2,064,158	+		MPMX19_01981	0.50	-1.2
2,064,158	+		MPMX19_01981	0.50	+0.5
2,064,158	+		MPMX19_01981	0.50	-1.8
2,064,158	+		MPMX19_01981	0.50	-0.8
2,064,159	-		MPMX19_01981	0.50	+0.5
2,064,159	-		MPMX19_01981	0.50	-0.5
2,064,159	-		MPMX19_01981	0.50	-0.2
2,064,227	+		MPMX19_01981	0.56	-0.7
2,064,227	+		MPMX19_01981	0.56	-0.2
2,064,228	-		MPMX19_01981	0.56	-0.3
2,064,491	+		MPMX19_01981	0.80	+0.9
2,064,491	+		MPMX19_01981	0.80	-2.0
2,064,491	+		MPMX19_01981	0.80	+0.6
2,064,491	+		MPMX19_01981	0.80	+0.2
2,064,491	+		MPMX19_01981	0.80	-1.3
2,064,491	+		MPMX19_01981	0.80	-0.7
2,064,491	+		MPMX19_01981	0.80	-0.8
2,064,491	+		MPMX19_01981	0.80	-0.3
2,064,491	+		MPMX19_01981	0.80	+0.5
2,064,491	+		MPMX19_01981	0.80	-1.1
2,064,491	+		MPMX19_01981	0.80	-0.2
2,064,491	+		MPMX19_01981	0.80	+0.5
2,064,491	+		MPMX19_01981	0.80	-0.3
2,064,491	+		MPMX19_01981	0.80	-1.9
2,064,491	+		MPMX19_01981	0.80	+0.5
2,064,491	+		MPMX19_01981	0.80	-0.0
2,064,491	+		MPMX19_01981	0.80	-0.5
2,064,491	+		MPMX19_01981	0.80	-2.4
2,064,492	-		MPMX19_01981	0.80	+0.4
2,064,492	-		MPMX19_01981	0.80	+1.3
2,064,492	-		MPMX19_01981	0.80	-1.6
2,064,492	-		MPMX19_01981	0.80	-0.0
2,064,492	-		MPMX19_01981	0.80	+0.7
2,064,492	-		MPMX19_01981	0.80	-0.1
2,064,492	-		MPMX19_01981	0.80	-0.0
2,064,492	-		MPMX19_01981	0.80	+0.9
2,064,492	-		MPMX19_01981	0.80	-0.0
2,064,492	-		MPMX19_01981	0.80	-0.3
2,064,492	-		MPMX19_01981	0.80	+0.5
2,064,492	-		MPMX19_01981	0.80	-0.2
2,064,492	-		MPMX19_01981	0.80	+1.1
2,064,492	-		MPMX19_01981	0.80	-1.0
2,064,492	-		MPMX19_01981	0.80	+0.5
2,064,492	-		MPMX19_01981	0.80	-0.6
2,064,492	-		MPMX19_01981	0.80	-0.8
2,064,492	-		MPMX19_01981	0.80	-0.1
2,064,492	-		MPMX19_01981	0.80	+0.4
2,064,492	-		MPMX19_01981	0.80	-0.0
2,064,492	-		MPMX19_01981	0.80	+0.5
2,064,492	-		MPMX19_01981	0.80	+1.5
2,064,492	-		MPMX19_01981	0.80	-0.3
2,064,492	-		MPMX19_01981	0.80	-1.9
2,064,492	-		MPMX19_01981	0.80	-0.3
2,064,492	-		MPMX19_01981	0.80	-0.0
2,064,497	+		MPMX19_01981	0.80	-0.2
2,064,497	+		MPMX19_01981	0.80	-0.3
2,064,497	+		MPMX19_01981	0.80	-0.8
2,064,497	+		MPMX19_01981	0.80	-0.0
2,064,497	+		MPMX19_01981	0.80	-0.8
2,064,497	+		MPMX19_01981	0.80	-0.1
2,064,497	+		MPMX19_01981	0.80	-1.2
2,064,498	-		MPMX19_01981	0.80	-1.0
2,064,498	-		MPMX19_01981	0.80	-0.6
2,064,498	-		MPMX19_01981	0.80	-2.0
2,064,498	-		MPMX19_01981	0.80	-0.8
2,064,498	-		MPMX19_01981	0.80	-0.7
2,064,566	+		MPMX19_01981	0.87	-2.6
2,064,566	+		MPMX19_01981	0.87	+1.3
2,064,566	+		MPMX19_01981	0.87	-1.2
2,064,566	+		MPMX19_01981	0.87	-2.0
2,064,566	+		MPMX19_01981	0.87	-2.0
2,064,566	+		MPMX19_01981	0.87	-0.3
2,064,566	+		MPMX19_01981	0.87	+1.3
2,064,567	-		MPMX19_01981	0.87	-0.0
2,064,567	-		MPMX19_01981	0.87	-1.0
2,064,567	-		MPMX19_01981	0.87	+0.0
2,064,567	-		MPMX19_01981	0.87	-0.9
2,064,567	-		MPMX19_01981	0.87	+1.1
2,064,567	-		MPMX19_01981	0.87	-1.5
2,064,569	+		MPMX19_01981	0.87	-0.8
2,064,569	+		MPMX19_01981	0.87	-0.5
2,064,569	+		MPMX19_01981	0.87	-1.3
2,064,569	+		MPMX19_01981	0.87	-0.5
2,064,569	+		MPMX19_01981	0.87	-0.0
2,064,569	+		MPMX19_01981	0.87	-0.9
2,064,569	+		MPMX19_01981	0.87	-0.9
2,064,570	-		MPMX19_01981	0.87	+0.7
2,064,570	-		MPMX19_01981	0.87	+0.1
2,064,570	-		MPMX19_01981	0.87	+0.0
2,064,659	+				-1.6
2,064,659	+				+0.7
2,064,660	-				-1.9
2,064,660	-				+0.8
2,064,660	-				-0.8
2,064,730	+				-0.3
2,064,730	+				+0.1
2,064,730	+				-0.2
2,064,730	+				-1.2
2,064,730	+				-0.3
2,064,730	+				-0.3
2,064,730	+				+0.7
2,064,730	+				+1.3
2,064,730	+				+0.0
2,064,730	+				-0.6
2,064,730	+				-0.8
2,064,730	+				-0.1
2,064,730	+				-1.0
2,064,731	-				-1.3
2,064,731	-				-0.9
2,064,731	-				-1.9
2,064,731	-				-1.0
2,064,731	-				-0.8
2,064,731	-				-0.2
2,064,731	-				-0.5
2,064,731	-				-0.3
2,064,731	-				-0.0
2,064,731	-				-0.6
2,064,731	-				-1.2
2,064,731	-				-0.6
2,064,872	+				-0.9
2,064,873	-				+0.1
2,065,344	+		MPMX19_01982	0.55	+0.5
2,065,344	+		MPMX19_01982	0.55	-0.8
2,065,344	+		MPMX19_01982	0.55	-0.9
2,065,344	+		MPMX19_01982	0.55	-1.8
2,065,344	+		MPMX19_01982	0.55	+1.5
2,065,344	+		MPMX19_01982	0.55	+0.9
2,065,344	+		MPMX19_01982	0.55	+0.9
2,065,344	+		MPMX19_01982	0.55	+1.8
2,065,344	+		MPMX19_01982	0.55	-0.7
2,065,344	+		MPMX19_01982	0.55	-0.0
2,065,344	+		MPMX19_01982	0.55	-0.3
2,065,344	+		MPMX19_01982	0.55	-0.6
2,065,344	+		MPMX19_01982	0.55	+0.5
2,065,344	+		MPMX19_01982	0.55	-0.3
2,065,344	+		MPMX19_01982	0.55	+0.8
2,065,344	+		MPMX19_01982	0.55	-1.3
2,065,344	+		MPMX19_01982	0.55	-0.6
2,065,344	+		MPMX19_01982	0.55	-0.4
2,065,344	+		MPMX19_01982	0.55	-0.5
2,065,344	+		MPMX19_01982	0.55	+0.7
2,065,344	+		MPMX19_01982	0.55	-0.3
2,065,344	+		MPMX19_01982	0.55	-1.5
2,065,344	+		MPMX19_01982	0.55	+0.2
2,065,344	+		MPMX19_01982	0.55	-0.9
2,065,345	-		MPMX19_01982	0.56	-1.5
2,065,345	-		MPMX19_01982	0.56	-0.4
2,065,345	-		MPMX19_01982	0.56	+0.3
2,065,345	-		MPMX19_01982	0.56	-1.5
2,065,345	-		MPMX19_01982	0.56	+0.9
2,065,345	-		MPMX19_01982	0.56	-0.3
2,065,345	-		MPMX19_01982	0.56	+1.0
2,065,345	-		MPMX19_01982	0.56	-0.6
2,065,482	+		MPMX19_01982	0.73	-1.4
2,065,482	+		MPMX19_01982	0.73	-0.9
2,065,482	+		MPMX19_01982	0.73	-1.6
2,065,482	+		MPMX19_01982	0.73	-0.6
2,065,482	+		MPMX19_01982	0.73	-1.7
2,065,482	+		MPMX19_01982	0.73	+0.5
2,065,482	+		MPMX19_01982	0.73	-2.0
2,065,483	-		MPMX19_01982	0.73	+0.1
2,065,483	-		MPMX19_01982	0.73	+1.3
2,065,483	-		MPMX19_01982	0.73	-1.5
2,065,563	+		MPMX19_01982	0.83	-1.1
2,065,563	+		MPMX19_01982	0.83	+0.5
2,065,564	-		MPMX19_01982	0.84	-1.3
2,065,614	+				+1.1
2,065,615	-				-0.9
2,065,615	-				-0.8
2,065,615	-				+0.7
2,065,615	-				-0.2
2,065,615	-				-1.0
2,065,615	-				-0.6
2,065,689	+				-1.8
2,065,690	-				-0.5
2,065,690	-				-0.6
2,065,690	-				+0.5
2,065,690	-				+0.7
2,065,690	-				+0.1