Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01334

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
1,386,250	+		MPMX19_01332	0.58	+0.4
1,386,250	+		MPMX19_01332	0.58	-1.8
1,386,250	+		MPMX19_01332	0.58	-0.6
1,386,251	-		MPMX19_01332	0.58	-1.0
1,386,251	-		MPMX19_01332	0.58	-0.1
1,386,251	-		MPMX19_01332	0.58	-1.0
1,386,251	-		MPMX19_01332	0.58	-1.4
1,386,251	-		MPMX19_01332	0.58	-2.7
1,386,251	-		MPMX19_01332	0.58	-0.1
1,386,251	-		MPMX19_01332	0.58	-2.0
1,386,394	+		MPMX19_01332	0.82	+0.0
1,386,394	+		MPMX19_01332	0.82	-0.5
1,386,395	-		MPMX19_01332	0.82	-1.3
1,386,395	-		MPMX19_01332	0.82	-0.4
1,386,564	+				+0.5
1,386,565	-				-0.2
1,386,565	-				-0.1
1,386,565	-				-0.3
1,386,810	+		MPMX19_01333	0.64	+1.4
1,386,810	+		MPMX19_01333	0.64	-1.1
1,386,810	+		MPMX19_01333	0.64	-0.2
1,386,810	+		MPMX19_01333	0.64	-0.1
1,386,810	+		MPMX19_01333	0.64	+0.9
1,386,810	+		MPMX19_01333	0.64	+0.1
1,386,810	+		MPMX19_01333	0.64	-0.4
1,386,810	+		MPMX19_01333	0.64	-0.8
1,386,810	+		MPMX19_01333	0.64	-0.3
1,386,810	+		MPMX19_01333	0.64	-1.6
1,386,810	+		MPMX19_01333	0.64	-0.8
1,386,810	+		MPMX19_01333	0.64	+1.5
1,386,810	+		MPMX19_01333	0.64	-0.7
1,386,810	+		MPMX19_01333	0.64	+1.1
1,386,811	-		MPMX19_01333	0.65	-2.4
1,386,811	-		MPMX19_01333	0.65	-0.4
1,386,811	-		MPMX19_01333	0.65	-0.5
1,386,811	-		MPMX19_01333	0.65	+1.5
1,386,811	-		MPMX19_01333	0.65	-0.8
1,386,811	-		MPMX19_01333	0.65	+1.8
1,386,811	-		MPMX19_01333	0.65	+0.5
1,386,811	-		MPMX19_01333	0.65	-0.7
1,386,811	-		MPMX19_01333	0.65	-1.4
1,386,811	-		MPMX19_01333	0.65	+0.7
1,386,811	-		MPMX19_01333	0.65	+0.2
1,386,811	-		MPMX19_01333	0.65	-0.4
1,386,811	-		MPMX19_01333	0.65	-0.0
1,386,811	-		MPMX19_01333	0.65	-0.1
1,386,811	-		MPMX19_01333	0.65	-0.7
1,386,811	-		MPMX19_01333	0.65	-0.2
1,386,955	+				-1.7
1,386,955	+				-0.5
1,386,956	-				-0.5
1,386,956	-				+0.8
1,386,956	-				-0.2
1,386,967	+				+1.0
1,386,967	+				-0.8
1,386,967	+				+0.1
1,386,967	+				-1.1
1,386,967	+				-1.0
1,386,967	+				-1.2
1,386,967	+				+0.0
1,386,967	+				+0.2
1,386,967	+				-0.8
1,386,967	+				+0.1
1,386,967	+				-0.3
1,386,967	+				-1.0
1,386,967	+				-1.3
1,386,967	+				-1.1
1,386,967	+				-1.3
1,386,967	+				-1.1
1,386,967	+				-1.2
1,386,967	+				-0.4
1,386,967	+				-1.0
1,386,967	+				-1.3
1,386,967	+				-0.2
1,386,967	+				+0.7
1,386,967	+				-1.2
1,386,967	+				-0.5
1,386,967	+				+0.5
1,386,967	+				-1.6
1,386,967	+				-1.8
1,386,967	+				-1.5
1,386,967	+				-1.4
1,386,967	+				+0.5
1,386,967	+				-1.4
1,386,967	+				-1.2
1,386,967	+				-1.9
1,386,967	+				-0.3
1,386,967	+				-1.4
1,386,967	+				-1.5
1,386,967	+				-1.2
1,386,967	+				-0.7
1,386,967	+				-1.8
1,386,967	+				+0.6
1,386,967	+				-0.9
1,386,968	-				-0.2
1,386,968	-				-0.2
1,386,968	-				+0.2
1,386,968	-				+0.4
1,386,968	-				+0.3
1,386,968	-				-0.2
1,386,968	-				-2.2
1,386,968	-				-1.1
1,386,968	-				-0.4
1,386,968	-				+0.4
1,386,968	-				-0.3
1,386,968	-				+0.3
1,386,968	-				+1.0
1,386,968	-				-0.3
1,386,968	-				-0.3
1,386,968	-				-1.5
1,386,968	-				-0.3
1,386,968	-				-0.5
1,386,968	-				-3.3
1,386,968	-				-0.6
1,386,968	-				+0.6
1,386,968	-				+1.5
1,386,968	-				+0.4
1,386,968	-				-0.5
1,386,968	-				+0.0
1,386,968	-				-0.2
1,386,973	+				-1.7
1,386,973	+				+0.6
1,386,973	+				-1.1
1,386,974	-				-1.1
1,386,974	-				+0.1
1,387,101	+				-1.1
1,387,101	+				-0.4
1,387,101	+				-2.0
1,387,101	+				-0.4
1,387,101	+				+1.0
1,387,102	-				-1.5
1,387,102	-				+1.2
1,387,306	+				-1.5
1,387,306	+				-0.7
1,387,306	+				-0.7
1,387,306	+				+0.5
1,387,306	+				-0.2
1,387,306	+				-1.0
1,387,306	+				+0.7
1,387,306	+				+0.1
1,387,306	+				+0.1
1,387,306	+				-0.8
1,387,306	+				-0.9
1,387,306	+				+0.5
1,387,307	-				-0.4
1,387,307	-				-0.8
1,387,307	-				-0.7
1,387,307	-				-0.8
1,387,307	-				-0.7
1,387,307	-				-1.0
1,387,307	-				+0.0
1,387,307	-				-1.0
1,387,307	-				-0.5
1,387,423	+		MPMX19_01334	0.19	-2.4
1,387,423	+		MPMX19_01334	0.19	-0.7
1,387,423	+		MPMX19_01334	0.19	-1.5
1,387,423	+		MPMX19_01334	0.19	-0.8
1,387,424	-		MPMX19_01334	0.19	-0.3
1,387,609	+		MPMX19_01334	0.36	+1.0
1,387,609	+		MPMX19_01334	0.36	+0.2
1,387,610	-		MPMX19_01334	0.36	+0.6
1,387,711	+		MPMX19_01334	0.45	+0.4
1,387,711	+		MPMX19_01334	0.45	-0.2
1,387,711	+		MPMX19_01334	0.45	-0.8
1,387,711	+		MPMX19_01334	0.45	-0.3
1,387,712	-		MPMX19_01334	0.45	-0.1
1,387,712	-		MPMX19_01334	0.45	-0.8
1,387,712	-		MPMX19_01334	0.45	-0.1
1,387,729	+		MPMX19_01334	0.47	-0.7
1,387,729	+		MPMX19_01334	0.47	+0.4
1,387,729	+		MPMX19_01334	0.47	-1.0
1,387,730	-		MPMX19_01334	0.47	-2.4
1,387,730	-		MPMX19_01334	0.47	-1.3
1,387,730	-		MPMX19_01334	0.47	+0.1
1,387,730	-		MPMX19_01334	0.47	-0.3
1,387,730	-		MPMX19_01334	0.47	-1.7
1,387,730	-		MPMX19_01334	0.47	+1.5
1,387,730	-		MPMX19_01334	0.47	-1.1
1,387,738	+		MPMX19_01334	0.48	-0.8
1,387,738	+		MPMX19_01334	0.48	+0.1
1,387,738	+		MPMX19_01334	0.48	-0.1
1,387,738	+		MPMX19_01334	0.48	-0.6
1,387,739	-		MPMX19_01334	0.48	+0.2
1,387,739	-		MPMX19_01334	0.48	-0.2
1,387,739	-		MPMX19_01334	0.48	-0.9
1,387,813	+		MPMX19_01334	0.55	-1.8
1,387,813	+		MPMX19_01334	0.55	-0.6
1,387,813	+		MPMX19_01334	0.55	+0.4
1,387,813	+		MPMX19_01334	0.55	+0.2
1,387,813	+		MPMX19_01334	0.55	-1.8
1,387,813	+		MPMX19_01334	0.55	-1.8
1,387,813	+		MPMX19_01334	0.55	-1.4
1,387,813	+		MPMX19_01334	0.55	-0.4
1,387,813	+		MPMX19_01334	0.55	-1.3
1,387,813	+		MPMX19_01334	0.55	-1.1
1,387,813	+		MPMX19_01334	0.55	-0.5
1,387,813	+		MPMX19_01334	0.55	-0.8
1,387,813	+		MPMX19_01334	0.55	-1.4
1,387,813	+		MPMX19_01334	0.55	-0.9
1,387,813	+		MPMX19_01334	0.55	-0.6
1,387,813	+		MPMX19_01334	0.55	+1.0
1,387,813	+		MPMX19_01334	0.55	+0.3
1,387,813	+		MPMX19_01334	0.55	-0.2
1,387,813	+		MPMX19_01334	0.55	+0.8
1,387,813	+		MPMX19_01334	0.55	-1.5
1,387,813	+		MPMX19_01334	0.55	+0.5
1,387,813	+		MPMX19_01334	0.55	-0.5
1,387,813	+		MPMX19_01334	0.55	-1.1
1,387,813	+		MPMX19_01334	0.55	-0.9
1,387,813	+		MPMX19_01334	0.55	+0.4
1,387,813	+		MPMX19_01334	0.55	+0.7
1,387,813	+		MPMX19_01334	0.55	-0.4
1,387,813	+		MPMX19_01334	0.55	-0.2
1,387,813	+		MPMX19_01334	0.55	-1.1
1,387,814	-		MPMX19_01334	0.55	+0.5
1,387,814	-		MPMX19_01334	0.55	+0.2
1,387,814	-		MPMX19_01334	0.55	-1.0
1,387,814	-		MPMX19_01334	0.55	-0.4
1,387,814	-		MPMX19_01334	0.55	+0.5
1,387,814	-		MPMX19_01334	0.55	-0.6
1,387,814	-		MPMX19_01334	0.55	-1.0
1,387,814	-		MPMX19_01334	0.55	-0.6
1,387,814	-		MPMX19_01334	0.55	-0.5
1,387,814	-		MPMX19_01334	0.55	-1.8
1,387,814	-		MPMX19_01334	0.55	-0.5
1,387,814	-		MPMX19_01334	0.55	+0.9
1,387,814	-		MPMX19_01334	0.55	-0.3
1,387,814	-		MPMX19_01334	0.55	-0.2
1,387,814	-		MPMX19_01334	0.55	+0.2
1,387,814	-		MPMX19_01334	0.55	-0.6
1,387,814	-		MPMX19_01334	0.55	-2.0
1,387,814	-		MPMX19_01334	0.55	-0.5
1,387,814	-		MPMX19_01334	0.55	-0.1
1,387,814	-		MPMX19_01334	0.55	-0.3
1,387,814	-		MPMX19_01334	0.55	-0.2
1,387,814	-		MPMX19_01334	0.55	-0.1
1,387,814	-		MPMX19_01334	0.55	-0.2
1,387,814	-		MPMX19_01334	0.55	-0.5
1,387,814	-		MPMX19_01334	0.55	-1.1
1,387,814	-		MPMX19_01334	0.55	-0.8
1,387,814	-		MPMX19_01334	0.55	-1.4
1,387,814	-		MPMX19_01334	0.55	-0.7
1,387,814	-		MPMX19_01334	0.55	-0.5
1,387,814	-		MPMX19_01334	0.55	-0.3
1,387,814	-		MPMX19_01334	0.55	-0.7
1,387,818	-		MPMX19_01334	0.55	-0.1
1,387,818	-		MPMX19_01334	0.55	+0.5
1,387,818	-		MPMX19_01334	0.55	-1.8
1,388,061	+		MPMX19_01334	0.78	-0.6
1,388,061	+		MPMX19_01334	0.78	-2.1
1,388,061	+		MPMX19_01334	0.78	+0.0
1,388,061	+		MPMX19_01334	0.78	-0.8
1,388,061	+		MPMX19_01334	0.78	-0.7
1,388,061	+		MPMX19_01334	0.78	+0.4
1,388,061	+		MPMX19_01334	0.78	+0.5
1,388,061	+		MPMX19_01334	0.78	+0.3
1,388,061	+		MPMX19_01334	0.78	-0.2
1,388,061	+		MPMX19_01334	0.78	+0.7
1,388,061	+		MPMX19_01334	0.78	-0.1
1,388,061	+		MPMX19_01334	0.78	-1.1
1,388,061	+		MPMX19_01334	0.78	+0.8
1,388,061	+		MPMX19_01334	0.78	-1.3
1,388,061	+		MPMX19_01334	0.78	-0.6
1,388,061	+		MPMX19_01334	0.78	-1.3
1,388,061	+		MPMX19_01334	0.78	-1.6
1,388,062	-		MPMX19_01334	0.78	-2.6
1,388,062	-		MPMX19_01334	0.78	-0.6
1,388,062	-		MPMX19_01334	0.78	+0.0
1,388,062	-		MPMX19_01334	0.78	+0.7
1,388,062	-		MPMX19_01334	0.78	+0.5
1,388,062	-		MPMX19_01334	0.78	+0.1
1,388,062	-		MPMX19_01334	0.78	+1.5
1,388,062	-		MPMX19_01334	0.78	-1.3
1,388,062	-		MPMX19_01334	0.78	+0.8
1,388,062	-		MPMX19_01334	0.78	-3.4
1,388,062	-		MPMX19_01334	0.78	-0.5
1,388,062	-		MPMX19_01334	0.78	-0.6
1,388,062	-		MPMX19_01334	0.78	-0.1
1,388,062	-		MPMX19_01334	0.78	-0.3
1,388,062	-		MPMX19_01334	0.78	-0.1
1,388,062	-		MPMX19_01334	0.78	-0.3
1,388,062	-		MPMX19_01334	0.78	-1.3
1,388,132	-		MPMX19_01334	0.84	-1.5
1,388,161	+		MPMX19_01334	0.87	-1.3
1,388,161	+		MPMX19_01334	0.87	+0.0
1,388,161	+		MPMX19_01334	0.87	-1.6
1,388,161	+		MPMX19_01334	0.87	-0.7
1,388,162	-		MPMX19_01334	0.87	-0.3
1,388,162	-		MPMX19_01334	0.87	-0.6
1,388,162	-		MPMX19_01334	0.87	-0.5
1,388,162	-		MPMX19_01334	0.87	+0.5
1,388,162	-		MPMX19_01334	0.87	-0.8
1,388,258	-				-0.2
1,388,303	+				+0.5
1,388,405	-				-0.1
1,388,464	+				-0.7
1,388,464	+				-0.8
1,388,465	-				-0.6
1,388,465	-				-0.1
1,388,465	-				-0.3
1,388,475	+				-0.7
1,388,475	+				-2.0
1,388,476	-				-1.7
1,388,476	-				+0.4
1,388,797	+		MPMX19_01335	0.42	+3.8
1,388,797	+		MPMX19_01335	0.42	+0.3
1,388,797	+		MPMX19_01335	0.42	-0.6
1,388,797	+		MPMX19_01335	0.42	+1.5
1,388,798	-		MPMX19_01335	0.42	-0.8
1,388,798	-		MPMX19_01335	0.42	-1.7
1,388,836	+		MPMX19_01335	0.47	-0.5
1,388,836	+		MPMX19_01335	0.47	+0.4
1,388,836	+		MPMX19_01335	0.47	-1.1
1,388,836	+		MPMX19_01335	0.47	-1.5
1,388,836	+		MPMX19_01335	0.47	-1.1
1,388,836	+		MPMX19_01335	0.47	+0.1
1,388,836	+		MPMX19_01335	0.47	-0.7
1,388,836	+		MPMX19_01335	0.47	-0.8
1,388,836	+		MPMX19_01335	0.47	-3.0
1,388,836	+		MPMX19_01335	0.47	-0.8
1,388,837	-		MPMX19_01335	0.47	-0.4
1,388,837	-		MPMX19_01335	0.47	+0.5
1,388,837	-		MPMX19_01335	0.47	-0.9
1,388,837	-		MPMX19_01335	0.47	+0.0
1,388,837	-		MPMX19_01335	0.47	-0.5
1,388,837	-		MPMX19_01335	0.47	-0.3
1,388,837	-		MPMX19_01335	0.47	+0.8
1,388,837	-		MPMX19_01335	0.47	+0.4
1,389,163	+		MPMX19_01335	0.89	+0.2
1,389,163	+		MPMX19_01335	0.89	-0.9
1,389,163	+		MPMX19_01335	0.89	-1.6
1,389,163	+		MPMX19_01335	0.89	-0.8
1,389,163	+		MPMX19_01335	0.89	-1.8
1,389,163	+		MPMX19_01335	0.89	-0.7
1,389,164	-		MPMX19_01335	0.89	-0.5
1,389,164	-		MPMX19_01335	0.89	-0.5