Experiment: NL-CCM; ambient oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00676 and MPMX19_00677 are separated by 99 nucleotides MPMX19_00677 and MPMX19_00678 are separated by 115 nucleotides
MPMX19_00676: MPMX19_00676 - hypothetical protein, at 698,370 to 699,515
_00676
MPMX19_00677: MPMX19_00677 - hypothetical protein, at 699,615 to 700,406
_00677
MPMX19_00678: MPMX19_00678 - Inositol-1-monophosphatase, at 700,522 to 701,319
_00678
Position (kb) 699
700
701 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 698.639 kb on + strand, within MPMX19_00676 at 698.639 kb on + strand, within MPMX19_00676 at 698.639 kb on + strand, within MPMX19_00676 at 698.639 kb on + strand, within MPMX19_00676 at 698.639 kb on + strand, within MPMX19_00676 at 698.639 kb on + strand, within MPMX19_00676 at 698.639 kb on + strand, within MPMX19_00676 at 698.639 kb on + strand, within MPMX19_00676 at 698.639 kb on + strand, within MPMX19_00676 at 698.639 kb on + strand, within MPMX19_00676 at 698.639 kb on + strand, within MPMX19_00676 at 698.640 kb on - strand, within MPMX19_00676 at 698.640 kb on - strand, within MPMX19_00676 at 698.640 kb on - strand, within MPMX19_00676 at 698.640 kb on - strand, within MPMX19_00676 at 698.640 kb on - strand, within MPMX19_00676 at 698.640 kb on - strand, within MPMX19_00676 at 698.640 kb on - strand, within MPMX19_00676 at 698.640 kb on - strand, within MPMX19_00676 at 698.640 kb on - strand, within MPMX19_00676 at 698.780 kb on - strand, within MPMX19_00676 at 698.780 kb on - strand, within MPMX19_00676 at 698.780 kb on - strand, within MPMX19_00676 at 699.136 kb on + strand, within MPMX19_00676 at 699.136 kb on + strand, within MPMX19_00676 at 699.137 kb on - strand, within MPMX19_00676 at 699.137 kb on - strand, within MPMX19_00676 at 699.137 kb on - strand, within MPMX19_00676 at 699.137 kb on - strand, within MPMX19_00676 at 699.304 kb on + strand, within MPMX19_00676 at 699.304 kb on + strand, within MPMX19_00676 at 699.304 kb on + strand, within MPMX19_00676 at 699.305 kb on - strand, within MPMX19_00676 at 699.305 kb on - strand, within MPMX19_00676 at 699.525 kb on + strand at 699.525 kb on + strand at 699.525 kb on + strand at 699.526 kb on - strand at 699.526 kb on - strand at 699.552 kb on + strand at 699.552 kb on + strand at 699.553 kb on - strand at 699.616 kb on + strand at 699.616 kb on + strand at 699.616 kb on + strand at 699.616 kb on + strand at 699.617 kb on - strand at 699.617 kb on - strand at 699.617 kb on - strand at 700.413 kb on - strand at 700.413 kb on - strand at 700.445 kb on - strand at 700.445 kb on - strand at 700.445 kb on - strand at 700.445 kb on - strand at 700.445 kb on - strand at 700.445 kb on - strand at 700.445 kb on - strand at 700.445 kb on - strand at 701.364 kb on - strand at 701.364 kb on - strand at 701.364 kb on - strand at 701.364 kb on - strand at 701.364 kb on - strand at 701.364 kb on - strand at 701.364 kb on - strand at 701.364 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; ambient oxygen remove 698,639 + MPMX19_00676 0.23 -0.7 698,639 + MPMX19_00676 0.23 +0.5 698,639 + MPMX19_00676 0.23 +1.5 698,639 + MPMX19_00676 0.23 +0.1 698,639 + MPMX19_00676 0.23 +0.5 698,639 + MPMX19_00676 0.23 +1.5 698,639 + MPMX19_00676 0.23 -0.4 698,639 + MPMX19_00676 0.23 +0.2 698,639 + MPMX19_00676 0.23 +0.9 698,639 + MPMX19_00676 0.23 -0.8 698,639 + MPMX19_00676 0.23 +1.9 698,640 - MPMX19_00676 0.24 -1.0 698,640 - MPMX19_00676 0.24 -0.1 698,640 - MPMX19_00676 0.24 -0.6 698,640 - MPMX19_00676 0.24 -0.3 698,640 - MPMX19_00676 0.24 -0.1 698,640 - MPMX19_00676 0.24 -1.5 698,640 - MPMX19_00676 0.24 -0.6 698,640 - MPMX19_00676 0.24 -0.8 698,640 - MPMX19_00676 0.24 -0.3 698,780 - MPMX19_00676 0.36 +0.2 698,780 - MPMX19_00676 0.36 +0.7 698,780 - MPMX19_00676 0.36 -2.6 699,136 + MPMX19_00676 0.67 -0.9 699,136 + MPMX19_00676 0.67 -0.2 699,137 - MPMX19_00676 0.67 -0.1 699,137 - MPMX19_00676 0.67 +0.0 699,137 - MPMX19_00676 0.67 -1.8 699,137 - MPMX19_00676 0.67 -0.6 699,304 + MPMX19_00676 0.82 +0.2 699,304 + MPMX19_00676 0.82 -0.7 699,304 + MPMX19_00676 0.82 -1.5 699,305 - MPMX19_00676 0.82 -1.5 699,305 - MPMX19_00676 0.82 -0.2 699,525 + +0.2 699,525 + -0.8 699,525 + -0.4 699,526 - -0.0 699,526 - +0.7 699,552 + -1.0 699,552 + -1.7 699,553 - -0.8 699,616 + -2.8 699,616 + -0.3 699,616 + +1.3 699,616 + -0.5 699,617 - -0.3 699,617 - +0.6 699,617 - +1.5 700,413 - +1.5 700,413 - -0.8 700,445 - +0.0 700,445 - +0.1 700,445 - +1.7 700,445 - -0.9 700,445 - +0.2 700,445 - -0.3 700,445 - -0.7 700,445 - +0.3 701,364 - -0.8 701,364 - -1.3 701,364 - +0.5 701,364 - -1.1 701,364 - +0.6 701,364 - +0.1 701,364 - -0.3 701,364 - -1.7
Or see this region's nucleotide sequence