Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02765

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
2,909,465	+		MPMX19_02764	0.21	-1.3
2,909,465	+		MPMX19_02764	0.21	+0.2
2,909,465	+		MPMX19_02764	0.21	-2.3
2,909,465	+		MPMX19_02764	0.21	-2.7
2,909,465	+		MPMX19_02764	0.21	-1.1
2,909,465	+		MPMX19_02764	0.21	+0.7
2,909,465	+		MPMX19_02764	0.21	-0.1
2,909,465	+		MPMX19_02764	0.21	+0.2
2,909,465	+		MPMX19_02764	0.21	-0.3
2,909,465	+		MPMX19_02764	0.21	-1.7
2,909,465	+		MPMX19_02764	0.21	-0.2
2,909,465	+		MPMX19_02764	0.21	-0.6
2,909,465	+		MPMX19_02764	0.21	+0.1
2,909,465	+		MPMX19_02764	0.21	+0.2
2,909,465	+		MPMX19_02764	0.21	+0.5
2,909,465	+		MPMX19_02764	0.21	-0.5
2,909,465	+		MPMX19_02764	0.21	-0.8
2,909,465	+		MPMX19_02764	0.21	+0.7
2,909,465	+		MPMX19_02764	0.21	-0.3
2,909,466	-		MPMX19_02764	0.21	-0.2
2,909,466	-		MPMX19_02764	0.21	-0.5
2,909,466	-		MPMX19_02764	0.21	+0.5
2,909,466	-		MPMX19_02764	0.21	+1.7
2,909,466	-		MPMX19_02764	0.21	-0.1
2,909,466	-		MPMX19_02764	0.21	-1.8
2,909,466	-		MPMX19_02764	0.21	-1.1
2,909,466	-		MPMX19_02764	0.21	-0.1
2,909,466	-		MPMX19_02764	0.21	-0.1
2,909,466	-		MPMX19_02764	0.21	-0.3
2,909,466	-		MPMX19_02764	0.21	-1.0
2,909,466	-		MPMX19_02764	0.21	-0.3
2,909,466	-		MPMX19_02764	0.21	-1.2
2,909,466	-		MPMX19_02764	0.21	+0.5
2,909,466	-		MPMX19_02764	0.21	+0.1
2,909,466	-		MPMX19_02764	0.21	-1.3
2,909,466	-		MPMX19_02764	0.21	-2.3
2,909,466	-		MPMX19_02764	0.21	+0.7
2,909,466	-		MPMX19_02764	0.21	-0.9
2,909,466	-		MPMX19_02764	0.21	+0.8
2,909,466	-		MPMX19_02764	0.21	+0.3
2,909,466	-		MPMX19_02764	0.21	-0.8
2,909,466	-		MPMX19_02764	0.21	-0.7
2,909,466	-		MPMX19_02764	0.21	-1.4
2,909,466	-		MPMX19_02764	0.21	-2.0
2,909,816	+		MPMX19_02764	0.62	-0.9
2,909,816	+		MPMX19_02764	0.62	-0.3
2,909,816	+		MPMX19_02764	0.62	+0.1
2,909,816	+		MPMX19_02764	0.62	-0.9
2,909,816	+		MPMX19_02764	0.62	+1.2
2,909,816	+		MPMX19_02764	0.62	-0.6
2,909,816	+		MPMX19_02764	0.62	-0.3
2,909,816	+		MPMX19_02764	0.62	+0.8
2,909,816	+		MPMX19_02764	0.62	+0.4
2,909,816	+		MPMX19_02764	0.62	+1.3
2,909,816	+		MPMX19_02764	0.62	+1.4
2,909,816	+		MPMX19_02764	0.62	+0.6
2,909,816	+		MPMX19_02764	0.62	+0.1
2,909,816	+		MPMX19_02764	0.62	-0.8
2,909,816	+		MPMX19_02764	0.62	-1.6
2,909,816	+		MPMX19_02764	0.62	+1.2
2,909,816	+		MPMX19_02764	0.62	+0.8
2,909,816	+		MPMX19_02764	0.62	-0.0
2,909,816	+		MPMX19_02764	0.62	-1.6
2,909,816	+		MPMX19_02764	0.62	-1.1
2,909,816	+		MPMX19_02764	0.62	+1.7
2,909,816	+		MPMX19_02764	0.62	-1.0
2,909,816	+		MPMX19_02764	0.62	+0.3
2,909,816	+		MPMX19_02764	0.62	-0.2
2,909,816	+		MPMX19_02764	0.62	+1.2
2,909,816	+		MPMX19_02764	0.62	+0.1
2,909,816	+		MPMX19_02764	0.62	-1.0
2,909,816	+		MPMX19_02764	0.62	+1.1
2,909,816	+		MPMX19_02764	0.62	-1.1
2,909,816	+		MPMX19_02764	0.62	+0.5
2,909,816	+		MPMX19_02764	0.62	-0.0
2,909,816	+		MPMX19_02764	0.62	+0.4
2,909,816	+		MPMX19_02764	0.62	-1.0
2,909,816	+		MPMX19_02764	0.62	-0.8
2,909,816	+		MPMX19_02764	0.62	-1.1
2,909,816	+		MPMX19_02764	0.62	-1.2
2,909,816	+		MPMX19_02764	0.62	-0.1
2,909,816	+		MPMX19_02764	0.62	-0.3
2,909,816	+		MPMX19_02764	0.62	-0.4
2,909,816	+		MPMX19_02764	0.62	+0.2
2,909,816	+		MPMX19_02764	0.62	-1.4
2,909,816	+		MPMX19_02764	0.62	-0.3
2,909,816	+		MPMX19_02764	0.62	-1.0
2,909,816	+		MPMX19_02764	0.62	-0.6
2,909,816	+		MPMX19_02764	0.62	+0.7
2,909,816	+		MPMX19_02764	0.62	-1.3
2,909,816	+		MPMX19_02764	0.62	-0.1
2,909,816	+		MPMX19_02764	0.62	-1.2
2,909,816	+		MPMX19_02764	0.62	-1.7
2,909,816	+		MPMX19_02764	0.62	-0.6
2,909,817	-		MPMX19_02764	0.62	-0.1
2,909,817	-		MPMX19_02764	0.62	-0.3
2,909,817	-		MPMX19_02764	0.62	-1.8
2,909,817	-		MPMX19_02764	0.62	-0.6
2,909,817	-		MPMX19_02764	0.62	-0.7
2,909,817	-		MPMX19_02764	0.62	+0.2
2,909,817	-		MPMX19_02764	0.62	-0.5
2,909,817	-		MPMX19_02764	0.62	-1.4
2,909,817	-		MPMX19_02764	0.62	-0.7
2,909,817	-		MPMX19_02764	0.62	+1.4
2,909,817	-		MPMX19_02764	0.62	-1.2
2,909,817	-		MPMX19_02764	0.62	-0.5
2,909,817	-		MPMX19_02764	0.62	-1.7
2,909,817	-		MPMX19_02764	0.62	-1.0
2,909,817	-		MPMX19_02764	0.62	+1.1
2,909,817	-		MPMX19_02764	0.62	-1.3
2,909,817	-		MPMX19_02764	0.62	-2.9
2,909,817	-		MPMX19_02764	0.62	+0.4
2,909,817	-		MPMX19_02764	0.62	-1.2
2,909,817	-		MPMX19_02764	0.62	+0.4
2,909,817	-		MPMX19_02764	0.62	-0.1
2,909,817	-		MPMX19_02764	0.62	-1.0
2,909,817	-		MPMX19_02764	0.62	-0.6
2,909,817	-		MPMX19_02764	0.62	-0.7
2,909,817	-		MPMX19_02764	0.62	-1.6
2,909,817	-		MPMX19_02764	0.62	+0.4
2,909,817	-		MPMX19_02764	0.62	+0.5
2,909,817	-		MPMX19_02764	0.62	-1.0
2,909,817	-		MPMX19_02764	0.62	+1.0
2,909,817	-		MPMX19_02764	0.62	+0.8
2,909,817	-		MPMX19_02764	0.62	-1.7
2,909,817	-		MPMX19_02764	0.62	-0.2
2,909,817	-		MPMX19_02764	0.62	-0.2
2,909,817	-		MPMX19_02764	0.62	-2.0
2,909,817	-		MPMX19_02764	0.62	-0.3
2,909,817	-		MPMX19_02764	0.62	+0.4
2,909,817	-		MPMX19_02764	0.62	-0.7
2,909,817	-		MPMX19_02764	0.62	-0.8
2,909,817	-		MPMX19_02764	0.62	+0.4
2,909,817	-		MPMX19_02764	0.62	-1.3
2,909,817	-		MPMX19_02764	0.62	-0.0
2,909,817	-		MPMX19_02764	0.62	-0.1
2,909,817	-		MPMX19_02764	0.62	-1.6
2,909,817	-		MPMX19_02764	0.62	-1.7
2,909,817	-		MPMX19_02764	0.62	-0.8
2,909,817	-		MPMX19_02764	0.62	-0.3
2,909,817	-		MPMX19_02764	0.62	-0.5
2,909,817	-		MPMX19_02764	0.62	-0.0
2,909,817	-		MPMX19_02764	0.62	-0.0
2,909,817	-		MPMX19_02764	0.62	-0.3
2,909,835	-		MPMX19_02764	0.65	+0.4
2,909,963	+		MPMX19_02764	0.80	-1.1
2,909,964	-		MPMX19_02764	0.80	+0.1
2,909,990	+		MPMX19_02764	0.83	-1.1
2,909,990	+		MPMX19_02764	0.83	-0.3
2,909,991	-		MPMX19_02764	0.83	-0.2
2,910,014	+		MPMX19_02764	0.86	-0.3
2,910,014	+		MPMX19_02764	0.86	-0.9
2,910,015	-		MPMX19_02764	0.86	-0.5
2,910,087	+				-0.0
2,910,087	+				-0.6
2,910,087	+				-0.5
2,910,087	+				-0.3
2,910,087	+				-1.3
2,910,087	+				+0.8
2,910,087	+				+0.3
2,910,087	+				+0.4
2,910,087	+				-2.3
2,910,087	+				+0.2
2,910,087	+				+0.5
2,910,088	-				+1.3
2,910,088	-				-0.7
2,910,088	-				+0.7
2,910,088	-				-0.1
2,910,088	-				-0.6
2,910,134	+				-0.7
2,910,134	+				+1.4
2,910,134	+				-1.8
2,910,134	+				+0.4
2,910,134	+				-0.9
2,910,134	+				-0.2
2,910,134	+				+0.1
2,910,134	+				+0.6
2,910,134	+				-0.6
2,910,134	+				+0.7
2,910,134	+				+0.4
2,910,134	+				-1.0
2,910,135	-				-0.5
2,910,135	-				-1.0
2,910,135	-				+0.5
2,910,135	-				-0.8
2,910,135	-				-0.5
2,910,135	-				+0.9
2,910,135	-				-0.6
2,910,135	-				+1.5
2,910,135	-				-1.8
2,910,135	-				+0.0
2,910,136	+				-0.2
2,910,136	+				+0.5
2,910,136	+				-0.5
2,910,136	+				-0.2
2,910,136	+				-1.0
2,910,136	+				-0.0
2,910,136	+				-0.1
2,910,136	+				-1.2
2,910,136	+				-1.3
2,910,136	+				-0.3
2,910,136	+				+0.5
2,910,136	+				-0.6
2,910,136	+				-1.9
2,910,136	+				-0.8
2,910,136	+				-0.1
2,910,136	+				-0.1
2,910,136	+				+0.2
2,910,136	+				+0.8
2,910,136	+				-0.5
2,910,136	+				-1.3
2,910,136	+				+0.2
2,910,137	-				+0.7
2,910,137	-				-0.8
2,910,137	-				-1.6
2,910,137	-				-0.5
2,910,137	-				-1.6
2,910,137	-				+0.7
2,910,137	-				-0.3
2,910,137	-				+1.1
2,910,137	-				-1.7
2,910,137	-				+1.1
2,910,137	-				-0.1
2,910,137	-				-0.5
2,910,137	-				-0.0
2,910,137	-				-1.3
2,910,137	-				-0.7
2,910,137	-				-0.5
2,910,137	-				-1.7
2,910,137	-				-1.3
2,910,137	-				+0.2
2,910,137	-				-0.8
2,910,137	-				-1.1
2,910,137	-				+0.2
2,910,137	-				-1.7
2,910,137	-				-0.6
2,910,137	-				-0.7
2,910,137	-				-0.1
2,910,137	-				-0.8
2,910,137	-				+1.2
2,910,137	-				+0.6
2,910,137	-				+1.2
2,910,137	-				-0.9
2,910,137	-				-0.8
2,910,137	-				-0.9
2,910,137	-				+0.7
2,910,137	-				-0.7
2,910,137	-				-1.9
2,910,137	-				+0.2
2,910,137	-				+0.1
2,910,137	-				-0.5
2,910,137	-				-2.1
2,910,432	+		MPMX19_02765	0.61	-1.1
2,910,432	+		MPMX19_02765	0.61	-0.8
2,910,432	+		MPMX19_02765	0.61	-0.8
2,910,432	+		MPMX19_02765	0.61	-1.8
2,910,432	+		MPMX19_02765	0.61	-2.0
2,910,432	+		MPMX19_02765	0.61	-1.5
2,910,432	+		MPMX19_02765	0.61	-0.6
2,910,432	+		MPMX19_02765	0.61	-1.4
2,910,432	+		MPMX19_02765	0.61	+0.1
2,910,432	+		MPMX19_02765	0.61	+1.0
2,910,432	+		MPMX19_02765	0.61	-0.1
2,910,432	+		MPMX19_02765	0.61	+0.4
2,910,432	+		MPMX19_02765	0.61	-0.4
2,910,432	+		MPMX19_02765	0.61	+1.7
2,910,432	+		MPMX19_02765	0.61	+1.0
2,910,432	+		MPMX19_02765	0.61	-0.0
2,910,432	+		MPMX19_02765	0.61	+0.4
2,910,432	+		MPMX19_02765	0.61	-1.5
2,910,432	+		MPMX19_02765	0.61	+1.0
2,910,433	-		MPMX19_02765	0.62	-0.9
2,910,433	-		MPMX19_02765	0.62	+0.5
2,910,433	-		MPMX19_02765	0.62	-0.6
2,910,433	-		MPMX19_02765	0.62	+0.7
2,910,433	-		MPMX19_02765	0.62	+0.8
2,910,433	-		MPMX19_02765	0.62	+1.3
2,910,433	-		MPMX19_02765	0.62	-0.1
2,910,433	-		MPMX19_02765	0.62	-1.2
2,910,433	-		MPMX19_02765	0.62	+1.1
2,910,433	-		MPMX19_02765	0.62	-1.3
2,910,618	+				+0.6
2,910,618	+				-0.7
2,910,618	+				-1.3
2,910,619	-				-0.7
2,910,619	-				-0.2
2,910,619	-				+0.8
2,910,619	-				-2.0
2,910,619	-				-0.3
2,910,619	-				-0.0
2,910,633	+				-0.8
2,910,633	+				-0.3
2,910,714	+				-0.2
2,910,714	+				+0.8
2,910,714	+				-1.0
2,910,714	+				+0.4
2,910,715	-				+1.1
2,910,715	-				-0.5
2,910,715	-				-1.2
2,910,715	-				+0.4
2,910,715	-				-1.7
2,910,715	-				-0.8
2,910,715	-				-0.1
2,910,715	-				-0.1
2,910,930	+		MPMX19_02766	0.29	-0.1
2,910,930	+		MPMX19_02766	0.29	+0.0
2,910,930	+		MPMX19_02766	0.29	+0.0
2,910,930	+		MPMX19_02766	0.29	-0.2
2,910,930	+		MPMX19_02766	0.29	-2.9
2,910,930	+		MPMX19_02766	0.29	-0.5
2,910,930	+		MPMX19_02766	0.29	+1.2
2,910,930	+		MPMX19_02766	0.29	-0.6
2,910,930	+		MPMX19_02766	0.29	-1.5
2,910,930	+		MPMX19_02766	0.29	-1.0
2,910,930	+		MPMX19_02766	0.29	-0.7
2,910,931	-		MPMX19_02766	0.29	-0.7
2,910,931	-		MPMX19_02766	0.29	-0.5
2,910,931	-		MPMX19_02766	0.29	-0.4
2,910,931	-		MPMX19_02766	0.29	-0.2
2,910,931	-		MPMX19_02766	0.29	-0.3
2,910,931	-		MPMX19_02766	0.29	+0.8
2,910,931	-		MPMX19_02766	0.29	+0.5
2,910,931	-		MPMX19_02766	0.29	-0.3
2,910,931	-		MPMX19_02766	0.29	-0.1
2,910,931	-		MPMX19_02766	0.29	-0.8
2,910,931	-		MPMX19_02766	0.29	-1.5
2,910,931	-		MPMX19_02766	0.29	+0.1
2,910,932	+		MPMX19_02766	0.29	+1.0
2,910,932	+		MPMX19_02766	0.29	-1.5
2,910,932	+		MPMX19_02766	0.29	+0.7
2,910,932	+		MPMX19_02766	0.29	-0.9
2,910,932	+		MPMX19_02766	0.29	-0.7
2,910,932	+		MPMX19_02766	0.29	-0.2
2,910,932	+		MPMX19_02766	0.29	-1.3
2,910,932	+		MPMX19_02766	0.29	-1.4
2,910,932	+		MPMX19_02766	0.29	-0.3
2,910,932	+		MPMX19_02766	0.29	-0.2
2,910,932	+		MPMX19_02766	0.29	-1.8
2,910,932	+		MPMX19_02766	0.29	+1.2
2,910,932	+		MPMX19_02766	0.29	+0.3
2,910,932	+		MPMX19_02766	0.29	-1.4
2,910,933	-		MPMX19_02766	0.29	-0.7
2,910,933	-		MPMX19_02766	0.29	-0.1
2,910,933	-		MPMX19_02766	0.29	-0.4
2,910,933	-		MPMX19_02766	0.29	+0.6
2,910,933	-		MPMX19_02766	0.29	-0.2
2,910,933	-		MPMX19_02766	0.29	-0.3
2,910,933	-		MPMX19_02766	0.29	-0.8
2,910,933	-		MPMX19_02766	0.29	-0.2
2,910,933	-		MPMX19_02766	0.29	-0.6
2,910,933	-		MPMX19_02766	0.29	-1.1
2,910,933	-		MPMX19_02766	0.29	-1.0
2,910,933	-		MPMX19_02766	0.29	-1.3
2,910,933	-		MPMX19_02766	0.29	-0.6
2,910,933	-		MPMX19_02766	0.29	-0.9
2,910,933	-		MPMX19_02766	0.29	-0.6
2,910,933	-		MPMX19_02766	0.29	-0.5
2,910,933	-		MPMX19_02766	0.29	+0.4
2,910,933	-		MPMX19_02766	0.29	-0.4
2,910,933	-		MPMX19_02766	0.29	-0.2
2,910,933	-		MPMX19_02766	0.29	-1.6
2,910,933	-		MPMX19_02766	0.29	-0.1
2,910,942	+		MPMX19_02766	0.30	+0.5
2,910,942	+		MPMX19_02766	0.30	-0.8
2,910,942	+		MPMX19_02766	0.30	-0.1
2,910,942	+		MPMX19_02766	0.30	-1.3
2,910,942	+		MPMX19_02766	0.30	-0.5
2,910,942	+		MPMX19_02766	0.30	-0.1
2,910,942	+		MPMX19_02766	0.30	+1.2
2,910,942	+		MPMX19_02766	0.30	-2.0
2,910,943	-		MPMX19_02766	0.30	-0.0
2,910,943	-		MPMX19_02766	0.30	+1.9
2,910,943	-		MPMX19_02766	0.30	-0.3
2,910,943	-		MPMX19_02766	0.30	-1.1
2,910,943	-		MPMX19_02766	0.30	-1.5
2,910,943	-		MPMX19_02766	0.30	-1.6
2,910,943	-		MPMX19_02766	0.30	-1.1
2,910,943	-		MPMX19_02766	0.30	+0.1
2,910,943	-		MPMX19_02766	0.30	-0.0
2,910,943	-		MPMX19_02766	0.30	-0.1
2,910,943	-		MPMX19_02766	0.30	-0.3
2,910,943	-		MPMX19_02766	0.30	+1.0
2,911,353	+		MPMX19_02766	0.83	-1.5
2,911,353	+		MPMX19_02766	0.83	-0.1
2,911,353	+		MPMX19_02766	0.83	-1.4
2,911,353	+		MPMX19_02766	0.83	-1.2
2,911,353	+		MPMX19_02766	0.83	-3.2
2,911,354	-		MPMX19_02766	0.83	-0.1
2,911,354	-		MPMX19_02766	0.83	-1.7
2,911,354	-		MPMX19_02766	0.83	-0.2
2,911,579	+				-0.6