Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02281

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
2,398,461	-		MPMX19_02280	0.19	-0.6
2,398,560	+		MPMX19_02280	0.31	-2.0
2,398,583	+		MPMX19_02280	0.34	-2.5
2,398,583	+		MPMX19_02280	0.34	-1.0
2,398,583	+		MPMX19_02280	0.34	-0.5
2,398,583	+		MPMX19_02280	0.34	-0.4
2,398,583	+		MPMX19_02280	0.34	-0.6
2,398,583	+		MPMX19_02280	0.34	+1.5
2,398,583	+		MPMX19_02280	0.34	+0.8
2,398,583	+		MPMX19_02280	0.34	-1.0
2,398,583	+		MPMX19_02280	0.34	-0.8
2,398,584	-		MPMX19_02280	0.34	+1.7
2,398,584	-		MPMX19_02280	0.34	-0.9
2,398,584	-		MPMX19_02280	0.34	-0.4
2,398,584	-		MPMX19_02280	0.34	-1.0
2,398,584	-		MPMX19_02280	0.34	-1.6
2,398,584	-		MPMX19_02280	0.34	-0.6
2,398,694	+		MPMX19_02280	0.48	-0.2
2,398,694	+		MPMX19_02280	0.48	-1.2
2,398,694	+		MPMX19_02280	0.48	+1.5
2,398,694	+		MPMX19_02280	0.48	+1.0
2,398,694	+		MPMX19_02280	0.48	-0.5
2,398,694	+		MPMX19_02280	0.48	-1.1
2,398,695	-		MPMX19_02280	0.48	-0.8
2,398,695	-		MPMX19_02280	0.48	-0.6
2,398,695	-		MPMX19_02280	0.48	+0.1
2,398,695	-		MPMX19_02280	0.48	-1.0
2,398,695	-		MPMX19_02280	0.48	-1.1
2,398,715	+		MPMX19_02280	0.50	-1.2
2,398,715	+		MPMX19_02280	0.50	-0.0
2,398,733	+		MPMX19_02280	0.52	-0.4
2,398,733	+		MPMX19_02280	0.52	+1.0
2,398,733	+		MPMX19_02280	0.52	+0.1
2,398,733	+		MPMX19_02280	0.52	+0.1
2,398,733	+		MPMX19_02280	0.52	-0.9
2,398,733	+		MPMX19_02280	0.52	+1.4
2,398,733	+		MPMX19_02280	0.52	-1.6
2,398,733	+		MPMX19_02280	0.52	-1.0
2,398,733	+		MPMX19_02280	0.52	-0.5
2,398,733	+		MPMX19_02280	0.52	-0.0
2,398,733	+		MPMX19_02280	0.52	+1.0
2,398,733	+		MPMX19_02280	0.52	-0.4
2,398,733	+		MPMX19_02280	0.52	-0.9
2,398,733	+		MPMX19_02280	0.52	-1.6
2,398,733	+		MPMX19_02280	0.52	+1.0
2,398,733	+		MPMX19_02280	0.52	-1.0
2,398,734	-		MPMX19_02280	0.53	-0.2
2,398,734	-		MPMX19_02280	0.53	-0.4
2,398,734	-		MPMX19_02280	0.53	-0.6
2,398,734	-		MPMX19_02280	0.53	+1.1
2,398,734	-		MPMX19_02280	0.53	-1.1
2,398,734	-		MPMX19_02280	0.53	-0.9
2,398,734	-		MPMX19_02280	0.53	-0.5
2,398,734	-		MPMX19_02280	0.53	-0.4
2,398,734	-		MPMX19_02280	0.53	-0.6
2,398,734	-		MPMX19_02280	0.53	-2.4
2,398,734	-		MPMX19_02280	0.53	+0.9
2,398,799	+		MPMX19_02280	0.61	+0.1
2,398,799	+		MPMX19_02280	0.61	-0.3
2,398,799	+		MPMX19_02280	0.61	-1.2
2,398,799	+		MPMX19_02280	0.61	+0.4
2,398,800	-		MPMX19_02280	0.61	+0.6
2,398,800	-		MPMX19_02280	0.61	-0.9
2,398,800	-		MPMX19_02280	0.61	-0.2
2,398,928	+		MPMX19_02280	0.77	+0.2
2,398,928	+		MPMX19_02280	0.77	-0.3
2,398,928	+		MPMX19_02280	0.77	-0.9
2,398,928	+		MPMX19_02280	0.77	-1.7
2,398,928	+		MPMX19_02280	0.77	+0.1
2,398,928	+		MPMX19_02280	0.77	+1.0
2,398,928	+		MPMX19_02280	0.77	-0.0
2,398,929	-		MPMX19_02280	0.77	-0.5
2,398,929	-		MPMX19_02280	0.77	-2.0
2,398,929	-		MPMX19_02280	0.77	-0.3
2,398,929	-		MPMX19_02280	0.77	-0.7
2,398,929	-		MPMX19_02280	0.77	+0.2
2,398,929	-		MPMX19_02280	0.77	-2.6
2,398,979	+		MPMX19_02280	0.83	-0.3
2,398,979	+		MPMX19_02280	0.83	-1.5
2,398,979	+		MPMX19_02280	0.83	-0.7
2,398,979	+		MPMX19_02280	0.83	-1.1
2,398,979	+		MPMX19_02280	0.83	-0.8
2,398,979	+		MPMX19_02280	0.83	-0.4
2,398,979	+		MPMX19_02280	0.83	-0.4
2,398,979	+		MPMX19_02280	0.83	-1.6
2,398,979	+		MPMX19_02280	0.83	-0.4
2,398,979	+		MPMX19_02280	0.83	-1.9
2,398,979	+		MPMX19_02280	0.83	+0.1
2,398,979	+		MPMX19_02280	0.83	-0.5
2,398,979	+		MPMX19_02280	0.83	-0.2
2,398,979	+		MPMX19_02280	0.83	-1.1
2,398,979	+		MPMX19_02280	0.83	-1.0
2,398,979	+		MPMX19_02280	0.83	+0.4
2,398,979	+		MPMX19_02280	0.83	-0.0
2,398,980	-		MPMX19_02280	0.83	-1.0
2,398,980	-		MPMX19_02280	0.83	-1.1
2,398,980	-		MPMX19_02280	0.83	+0.4
2,398,980	-		MPMX19_02280	0.83	+0.4
2,398,980	-		MPMX19_02280	0.83	-2.9
2,398,980	-		MPMX19_02280	0.83	-1.3
2,398,980	-		MPMX19_02280	0.83	-0.8
2,398,980	-		MPMX19_02280	0.83	-1.5
2,398,980	-		MPMX19_02280	0.83	-0.6
2,398,980	-		MPMX19_02280	0.83	-0.5
2,398,980	-		MPMX19_02280	0.83	-0.2
2,398,980	-		MPMX19_02280	0.83	-0.9
2,398,980	-		MPMX19_02280	0.83	-1.1
2,398,980	-		MPMX19_02280	0.83	-0.6
2,398,980	-		MPMX19_02280	0.83	+0.7
2,398,980	-		MPMX19_02280	0.83	+0.1
2,398,985	+		MPMX19_02280	0.84	-0.7
2,398,985	+		MPMX19_02280	0.84	-1.4
2,398,985	+		MPMX19_02280	0.84	-0.7
2,398,985	+		MPMX19_02280	0.84	-0.4
2,398,985	+		MPMX19_02280	0.84	+1.3
2,398,985	+		MPMX19_02280	0.84	-1.0
2,398,985	+		MPMX19_02280	0.84	-1.0
2,398,985	+		MPMX19_02280	0.84	-0.8
2,398,985	+		MPMX19_02280	0.84	-0.4
2,398,985	+		MPMX19_02280	0.84	+1.2
2,398,985	+		MPMX19_02280	0.84	-0.2
2,398,985	+		MPMX19_02280	0.84	+0.8
2,398,985	+		MPMX19_02280	0.84	+1.0
2,398,985	+		MPMX19_02280	0.84	-0.2
2,398,985	+		MPMX19_02280	0.84	+1.0
2,398,985	+		MPMX19_02280	0.84	-0.4
2,398,985	+		MPMX19_02280	0.84	+0.2
2,398,985	+		MPMX19_02280	0.84	-1.0
2,398,985	+		MPMX19_02280	0.84	-0.9
2,398,985	+		MPMX19_02280	0.84	-0.9
2,398,985	+		MPMX19_02280	0.84	+0.7
2,398,985	+		MPMX19_02280	0.84	-0.5
2,398,985	+		MPMX19_02280	0.84	-1.6
2,398,985	+		MPMX19_02280	0.84	+0.6
2,398,986	-		MPMX19_02280	0.84	-2.1
2,398,986	-		MPMX19_02280	0.84	+0.1
2,398,986	-		MPMX19_02280	0.84	-1.0
2,398,986	-		MPMX19_02280	0.84	+0.5
2,398,986	-		MPMX19_02280	0.84	-0.2
2,398,986	-		MPMX19_02280	0.84	-0.6
2,398,986	-		MPMX19_02280	0.84	+1.0
2,398,986	-		MPMX19_02280	0.84	-0.9
2,398,986	-		MPMX19_02280	0.84	-0.4
2,398,986	-		MPMX19_02280	0.84	+0.5
2,398,986	-		MPMX19_02280	0.84	-0.8
2,398,986	-		MPMX19_02280	0.84	-0.4
2,398,986	-		MPMX19_02280	0.84	+0.0
2,398,986	-		MPMX19_02280	0.84	-0.0
2,398,986	-		MPMX19_02280	0.84	-0.0
2,398,986	-		MPMX19_02280	0.84	-0.9
2,398,986	-		MPMX19_02280	0.84	+0.5
2,398,986	-		MPMX19_02280	0.84	+0.3
2,398,986	-		MPMX19_02280	0.84	-0.7
2,398,986	-		MPMX19_02280	0.84	-0.9
2,398,986	-		MPMX19_02280	0.84	-0.0
2,399,060	+				+0.5
2,399,060	+				+0.7
2,399,060	+				-1.7
2,399,060	+				-1.0
2,399,060	+				-1.0
2,399,061	-				+0.1
2,399,061	-				+0.5
2,399,138	+				-0.7
2,399,138	+				+0.5
2,399,138	+				-0.4
2,399,138	+				-0.6
2,399,138	+				+0.1
2,399,138	+				-0.9
2,399,138	+				-0.6
2,399,138	+				-0.8
2,399,138	+				+0.1
2,399,138	+				-0.2
2,399,138	+				-0.9
2,399,138	+				-0.3
2,399,138	+				-0.5
2,399,138	+				+0.1
2,399,138	+				-1.2
2,399,138	+				+0.4
2,399,138	+				+0.5
2,399,138	+				-0.9
2,399,138	+				-0.6
2,399,138	+				-0.8
2,399,138	+				-0.2
2,399,138	+				-0.0
2,399,138	+				+0.2
2,399,138	+				+0.2
2,399,138	+				-0.5
2,399,138	+				-1.6
2,399,138	+				-0.6
2,399,138	+				-2.2
2,399,138	+				+1.0
2,399,138	+				+1.0
2,399,138	+				-1.2
2,399,138	+				-1.1
2,399,138	+				-0.9
2,399,138	+				+1.7
2,399,138	+				-0.6
2,399,138	+				-0.6
2,399,138	+				-0.9
2,399,139	-				+1.0
2,399,139	-				+0.2
2,399,139	-				-1.4
2,399,139	-				-0.2
2,399,139	-				-0.2
2,399,139	-				+1.3
2,399,139	-				-0.3
2,399,139	-				+0.4
2,399,139	-				+0.7
2,399,139	-				-0.6
2,399,139	-				-1.4
2,399,139	-				+0.5
2,399,139	-				-0.2
2,399,139	-				+0.8
2,399,139	-				+0.3
2,399,139	-				+0.1
2,399,139	-				-2.2
2,399,139	-				-0.9
2,399,139	-				+0.7
2,399,139	-				+0.4
2,399,139	-				-1.4
2,399,139	-				+0.2
2,399,139	-				-0.4
2,399,139	-				-0.4
2,399,139	-				-0.6
2,399,139	-				-0.8
2,399,139	-				-1.0
2,399,139	-				-1.4
2,399,139	-				-0.4
2,399,139	-				-0.8
2,399,139	-				-0.6
2,399,139	-				+1.2
2,399,139	-				+0.0
2,399,139	-				-0.2
2,399,139	-				-0.5
2,399,139	-				+1.2
2,399,139	-				-0.9
2,399,139	-				-0.4
2,399,139	-				-0.8
2,399,139	-				+0.1
2,399,139	-				-2.1
2,399,139	-				-0.6
2,399,139	-				+0.1
2,399,139	-				-0.3
2,399,139	-				-0.2
2,399,141	+				+2.4
2,399,141	+				-1.0
2,399,141	+				-0.3
2,399,141	+				+0.4
2,399,141	+				+1.4
2,399,141	+				-2.5
2,399,141	+				+0.4
2,399,142	-				-1.2
2,399,142	-				-0.5
2,399,142	-				-0.9
2,399,142	-				-0.6
2,399,142	-				-1.9
2,399,142	-				-0.6
2,399,142	-				+1.0
2,399,142	-				-0.5
2,399,142	-				-2.0
2,399,142	-				-1.6
2,399,142	-				+0.5
2,399,142	-				-0.1
2,399,204	+				-1.0
2,399,204	+				-1.7
2,399,204	+				+1.5
2,399,204	+				+0.5
2,399,204	+				-2.0
2,399,204	+				-0.6
2,399,204	+				-1.2
2,399,205	-				+1.5
2,399,205	-				+0.4
2,399,205	-				-0.6
2,399,205	-				-0.9
2,399,205	-				-0.1
2,399,205	-				-1.4
2,399,645	+				+1.0
2,399,645	+				-1.0
2,399,645	+				+0.5
2,399,645	+				-2.5
2,399,645	+				+0.2
2,399,645	+				+1.5
2,399,645	+				-0.4
2,399,645	+				-0.6
2,399,645	+				-0.0
2,399,645	+				+0.4
2,399,645	+				-2.6
2,399,645	+				-2.6
2,399,645	+				-1.0
2,399,645	+				-1.4
2,399,645	+				-0.9
2,399,645	+				-0.0
2,399,645	+				+0.8
2,399,645	+				-1.0
2,399,645	+				-2.3
2,399,645	+				-0.3
2,399,645	+				-0.4
2,399,645	+				-1.2
2,399,645	+				-1.9
2,399,645	+				-1.0
2,399,645	+				+0.6
2,399,645	+				-1.4
2,399,645	+				-1.3
2,399,645	+				-0.9
2,399,645	+				-0.4
2,399,645	+				+0.3
2,399,645	+				-2.5
2,399,645	+				-1.6
2,399,645	+				+0.6
2,399,645	+				-1.7
2,399,645	+				+0.3
2,399,645	+				+0.2
2,399,645	+				-1.4
2,399,645	+				-0.2
2,399,645	+				+0.6
2,399,645	+				-0.4
2,399,646	-				-1.2
2,399,646	-				-0.6
2,399,646	-				-0.6
2,399,646	-				-1.2
2,399,646	-				-0.2
2,399,646	-				-0.4
2,399,646	-				-1.1
2,399,646	-				+0.1
2,399,646	-				-0.6
2,399,646	-				-1.9
2,399,646	-				-1.0
2,399,646	-				+0.4
2,399,646	-				-0.4
2,399,646	-				-0.0
2,399,646	-				-0.7
2,399,646	-				-1.2
2,399,646	-				-1.0
2,399,646	-				+0.6
2,399,646	-				+0.6
2,399,646	-				+0.4
2,399,646	-				-1.0
2,399,688	+				-1.5
2,399,688	+				-0.9
2,399,688	+				-1.2
2,399,688	+				-0.5
2,399,688	+				-1.1
2,399,688	+				-0.9
2,399,688	+				-0.0
2,399,688	+				-1.0
2,399,688	+				+0.1
2,399,688	+				-0.7
2,399,689	-				-0.7
2,399,689	-				+0.6
2,399,689	-				+0.7
2,399,689	-				+0.6
2,399,689	-				-1.3
2,399,689	-				-1.6
2,399,689	-				+0.4
2,399,689	-				+0.7
2,399,689	-				-0.2
2,399,689	-				-1.6
2,399,689	-				-0.2
2,399,784	-				+0.8
2,399,784	-				-1.0
2,399,878	+				-1.2
2,399,878	+				+1.2
2,399,878	+				-1.3
2,399,878	+				-0.1
2,399,878	+				-0.2
2,399,878	+				-1.7
2,399,878	+				+0.1
2,399,878	+				+1.1
2,399,879	-				-0.0
2,399,879	-				+0.8
2,399,879	-				-0.7
2,399,879	-				-0.1
2,399,879	-				-1.7
2,399,879	-				-1.0
2,399,879	-				-0.2
2,399,879	-				-0.8
2,399,891	+				-2.0
2,399,891	+				-0.7
2,399,891	+				-0.5
2,399,891	+				-0.6
2,399,891	+				-1.2
2,399,891	+				-0.2
2,399,891	+				-1.2
2,399,891	+				+0.1
2,399,891	+				-1.1
2,399,891	+				-1.9
2,399,891	+				+1.6
2,399,891	+				+1.3
2,399,892	-				+0.3
2,399,892	-				-0.3
2,399,892	-				+0.7
2,399,892	-				-0.7
2,399,892	-				-0.5
2,399,892	-				-0.4
2,399,892	-				-1.7
2,399,892	-				+0.2
2,399,892	-				+0.0
2,399,892	-				-0.6
2,399,892	-				-0.4
2,399,892	-				+1.0
2,399,892	-				+1.1
2,399,892	-				+0.4
2,399,892	-				-0.2
2,399,892	-				-0.6
2,399,908	+				+1.0
2,399,908	+				+0.0
2,399,908	+				+0.1
2,399,908	+				+0.4
2,399,908	+				-0.2
2,399,908	+				-0.2
2,399,908	+				-0.9
2,399,909	-				-1.6
2,399,909	-				-1.3
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2,399,909	-				+1.2
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2,400,391	+				+1.4
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2,400,392	-				-1.0
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2,400,414	+				-0.4
2,400,414	+				-0.2
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2,400,414	+				-0.6
2,400,414	+				+0.9
2,400,414	+				-0.5
2,400,414	+				+0.2
2,400,415	-				-1.7
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2,400,415	-				+0.2
2,400,415	-				+0.3
2,400,415	-				+1.0
2,400,415	-				+1.1
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2,400,596	+		MPMX19_02282	0.14	-0.9
2,400,596	+		MPMX19_02282	0.14	-0.9
2,400,596	+		MPMX19_02282	0.14	+0.5
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2,400,596	+		MPMX19_02282	0.14	-0.9
2,400,596	+		MPMX19_02282	0.14	+0.6
2,400,596	+		MPMX19_02282	0.14	+1.4
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2,400,596	+		MPMX19_02282	0.14	-0.3
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2,400,596	+		MPMX19_02282	0.14	-0.9
2,400,596	+		MPMX19_02282	0.14	-1.5
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2,400,596	+		MPMX19_02282	0.14	-0.0
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2,400,596	+		MPMX19_02282	0.14	-0.0
2,400,597	-		MPMX19_02282	0.14	-0.5
2,400,597	-		MPMX19_02282	0.14	-0.3
2,400,597	-		MPMX19_02282	0.14	-0.6
2,400,597	-		MPMX19_02282	0.14	+1.5
2,400,597	-		MPMX19_02282	0.14	-0.5
2,400,597	-		MPMX19_02282	0.14	-0.6
2,400,597	-		MPMX19_02282	0.14	-1.2
2,400,597	-		MPMX19_02282	0.14	-0.2
2,400,597	-		MPMX19_02282	0.14	-0.0
2,400,597	-		MPMX19_02282	0.14	+0.0
2,400,597	-		MPMX19_02282	0.14	-1.3
2,400,597	-		MPMX19_02282	0.14	+0.8
2,400,597	-		MPMX19_02282	0.14	-0.6
2,400,597	-		MPMX19_02282	0.14	+0.2
2,400,597	-		MPMX19_02282	0.14	+0.5