Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02280

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
2,397,386	+		MPMX19_02278	0.52	-1.4
2,397,386	+		MPMX19_02278	0.52	-0.9
2,397,386	+		MPMX19_02278	0.52	+1.0
2,397,387	-		MPMX19_02278	0.52	-0.3
2,397,387	-		MPMX19_02278	0.52	-0.1
2,397,387	-		MPMX19_02278	0.52	+0.1
2,397,387	-		MPMX19_02278	0.52	-0.6
2,397,387	-		MPMX19_02278	0.52	-0.3
2,397,387	-		MPMX19_02278	0.52	+0.8
2,397,387	-		MPMX19_02278	0.52	-0.9
2,397,387	-		MPMX19_02278	0.52	-0.4
2,397,432	+		MPMX19_02278	0.70	-0.6
2,397,432	+		MPMX19_02278	0.70	-0.6
2,397,432	+		MPMX19_02278	0.70	-1.5
2,397,433	-		MPMX19_02278	0.71	+1.4
2,397,433	-		MPMX19_02278	0.71	-1.5
2,397,435	+		MPMX19_02278	0.71	+0.4
2,397,435	+		MPMX19_02278	0.71	-0.2
2,397,435	+		MPMX19_02278	0.71	+0.4
2,397,435	+		MPMX19_02278	0.71	+0.5
2,397,435	+		MPMX19_02278	0.71	-2.3
2,397,435	+		MPMX19_02278	0.71	-1.7
2,397,435	+		MPMX19_02278	0.71	-1.5
2,397,435	+		MPMX19_02278	0.71	-1.0
2,397,436	-		MPMX19_02278	0.72	-1.1
2,397,436	-		MPMX19_02278	0.72	-0.3
2,397,436	-		MPMX19_02278	0.72	-0.7
2,397,436	-		MPMX19_02278	0.72	-0.1
2,397,436	-		MPMX19_02278	0.72	+0.1
2,397,436	-		MPMX19_02278	0.72	-0.0
2,397,436	-		MPMX19_02278	0.72	-2.0
2,397,436	-		MPMX19_02278	0.72	-1.0
2,397,475	+		MPMX19_02278	0.88	-1.0
2,397,475	+		MPMX19_02278	0.88	-0.6
2,397,475	+		MPMX19_02278	0.88	-1.5
2,397,475	+		MPMX19_02278	0.88	-1.0
2,397,475	+		MPMX19_02278	0.88	-0.5
2,397,476	-		MPMX19_02278	0.88	-0.4
2,397,476	-		MPMX19_02278	0.88	-0.2
2,397,476	-		MPMX19_02278	0.88	+1.0
2,397,476	-		MPMX19_02278	0.88	-0.6
2,397,476	-		MPMX19_02278	0.88	-1.2
2,397,476	-		MPMX19_02278	0.88	-1.5
2,397,521	+				+0.1
2,397,521	+				-0.5
2,397,522	-				-1.4
2,397,522	-				-1.9
2,397,557	+				+1.3
2,397,557	+				-0.2
2,397,557	+				+0.4
2,397,557	+				-1.4
2,397,557	+				-0.4
2,397,557	+				-1.6
2,397,557	+				+0.4
2,397,557	+				-0.6
2,397,557	+				-3.8
2,397,557	+				-1.4
2,397,557	+				+0.2
2,397,557	+				+0.8
2,397,557	+				-1.2
2,397,558	+				+0.8
2,397,558	-				-1.9
2,397,558	-				-1.0
2,397,558	-				-1.0
2,397,558	-				-0.6
2,397,558	-				-0.9
2,397,558	-				-0.9
2,397,558	-				+0.4
2,397,558	-				+0.7
2,397,642	+				-1.0
2,397,642	+				+1.2
2,397,642	+				+1.0
2,397,642	+				-0.3
2,397,642	+				-1.6
2,397,643	-				-0.3
2,397,643	-				+1.0
2,397,643	-				+0.4
2,397,654	+				-1.5
2,397,654	+				+0.4
2,397,654	+				-0.9
2,397,654	+				-0.6
2,397,654	+				-1.0
2,397,654	+				-0.5
2,397,654	+				-0.2
2,397,654	+				+1.2
2,397,654	+				+0.7
2,397,654	+				+0.5
2,397,654	+				-0.5
2,397,655	-				+0.4
2,397,655	-				+0.5
2,397,655	-				-0.7
2,397,655	-				-0.7
2,397,655	-				+2.5
2,397,655	-				-1.0
2,397,692	-		MPMX19_02279	0.14	-0.2
2,397,710	+		MPMX19_02279	0.18	-0.6
2,397,710	+		MPMX19_02279	0.18	-1.2
2,397,710	+		MPMX19_02279	0.18	+0.4
2,397,710	+		MPMX19_02279	0.18	+0.4
2,397,711	-		MPMX19_02279	0.18	-0.0
2,397,711	-		MPMX19_02279	0.18	-1.2
2,397,711	-		MPMX19_02279	0.18	-0.9
2,397,711	-		MPMX19_02279	0.18	+1.1
2,397,711	-		MPMX19_02279	0.18	+0.4
2,398,167	+				-0.3
2,398,167	+				-0.6
2,398,167	+				-1.2
2,398,167	+				-0.5
2,398,167	+				-1.0
2,398,167	+				-1.0
2,398,167	+				-0.3
2,398,167	+				+0.7
2,398,167	+				-0.6
2,398,167	+				+0.4
2,398,167	+				-0.6
2,398,167	+				+0.1
2,398,167	+				+0.2
2,398,167	+				+2.0
2,398,167	+				-0.5
2,398,167	+				-1.2
2,398,167	+				-0.0
2,398,167	+				-1.0
2,398,167	+				-0.0
2,398,167	+				-0.4
2,398,167	+				-0.2
2,398,167	+				-0.0
2,398,167	+				-1.0
2,398,167	+				-0.7
2,398,167	+				-1.2
2,398,167	+				-1.4
2,398,167	+				+0.4
2,398,167	+				-1.0
2,398,167	+				-0.6
2,398,167	+				+0.2
2,398,167	+				-1.4
2,398,167	+				-1.5
2,398,167	+				-0.4
2,398,167	+				+0.1
2,398,167	+				-1.0
2,398,167	+				+0.2
2,398,167	+				-0.3
2,398,167	+				-0.7
2,398,167	+				-2.2
2,398,167	+				-1.2
2,398,167	+				-0.4
2,398,167	+				-0.0
2,398,167	+				-0.0
2,398,167	+				+0.1
2,398,167	+				+1.3
2,398,167	+				-0.4
2,398,167	+				-0.7
2,398,168	-				-0.5
2,398,168	-				-0.3
2,398,168	-				+0.6
2,398,168	-				-0.1
2,398,168	-				-1.0
2,398,168	-				-1.4
2,398,168	-				-1.5
2,398,168	-				-1.3
2,398,168	-				+1.5
2,398,168	-				-0.6
2,398,168	-				-0.1
2,398,168	-				-2.4
2,398,168	-				+0.8
2,398,168	-				+1.1
2,398,168	-				-0.2
2,398,168	-				+0.6
2,398,168	-				+0.4
2,398,168	-				-3.2
2,398,168	-				+0.4
2,398,168	-				-1.5
2,398,168	-				-0.0
2,398,168	-				-1.2
2,398,168	-				+0.1
2,398,168	-				-0.2
2,398,168	-				-0.2
2,398,168	-				-1.6
2,398,168	-				-1.5
2,398,168	-				-2.2
2,398,168	-				-0.6
2,398,168	-				-1.5
2,398,461	-		MPMX19_02280	0.19	-0.6
2,398,560	+		MPMX19_02280	0.31	-2.0
2,398,583	+		MPMX19_02280	0.34	-2.5
2,398,583	+		MPMX19_02280	0.34	-1.0
2,398,583	+		MPMX19_02280	0.34	-0.5
2,398,583	+		MPMX19_02280	0.34	-0.4
2,398,583	+		MPMX19_02280	0.34	-0.6
2,398,583	+		MPMX19_02280	0.34	+1.5
2,398,583	+		MPMX19_02280	0.34	+0.8
2,398,583	+		MPMX19_02280	0.34	-1.0
2,398,583	+		MPMX19_02280	0.34	-0.8
2,398,584	-		MPMX19_02280	0.34	+1.7
2,398,584	-		MPMX19_02280	0.34	-0.9
2,398,584	-		MPMX19_02280	0.34	-0.4
2,398,584	-		MPMX19_02280	0.34	-1.0
2,398,584	-		MPMX19_02280	0.34	-1.6
2,398,584	-		MPMX19_02280	0.34	-0.6
2,398,694	+		MPMX19_02280	0.48	-0.2
2,398,694	+		MPMX19_02280	0.48	-1.2
2,398,694	+		MPMX19_02280	0.48	+1.5
2,398,694	+		MPMX19_02280	0.48	+1.0
2,398,694	+		MPMX19_02280	0.48	-0.5
2,398,694	+		MPMX19_02280	0.48	-1.1
2,398,695	-		MPMX19_02280	0.48	-0.8
2,398,695	-		MPMX19_02280	0.48	-0.6
2,398,695	-		MPMX19_02280	0.48	+0.1
2,398,695	-		MPMX19_02280	0.48	-1.0
2,398,695	-		MPMX19_02280	0.48	-1.1
2,398,715	+		MPMX19_02280	0.50	-1.2
2,398,715	+		MPMX19_02280	0.50	-0.0
2,398,733	+		MPMX19_02280	0.52	-0.4
2,398,733	+		MPMX19_02280	0.52	+1.0
2,398,733	+		MPMX19_02280	0.52	+0.1
2,398,733	+		MPMX19_02280	0.52	+0.1
2,398,733	+		MPMX19_02280	0.52	-0.9
2,398,733	+		MPMX19_02280	0.52	+1.4
2,398,733	+		MPMX19_02280	0.52	-1.6
2,398,733	+		MPMX19_02280	0.52	-1.0
2,398,733	+		MPMX19_02280	0.52	-0.5
2,398,733	+		MPMX19_02280	0.52	-0.0
2,398,733	+		MPMX19_02280	0.52	+1.0
2,398,733	+		MPMX19_02280	0.52	-0.4
2,398,733	+		MPMX19_02280	0.52	-0.9
2,398,733	+		MPMX19_02280	0.52	-1.6
2,398,733	+		MPMX19_02280	0.52	+1.0
2,398,733	+		MPMX19_02280	0.52	-1.0
2,398,734	-		MPMX19_02280	0.53	-0.2
2,398,734	-		MPMX19_02280	0.53	-0.4
2,398,734	-		MPMX19_02280	0.53	-0.6
2,398,734	-		MPMX19_02280	0.53	+1.1
2,398,734	-		MPMX19_02280	0.53	-1.1
2,398,734	-		MPMX19_02280	0.53	-0.9
2,398,734	-		MPMX19_02280	0.53	-0.5
2,398,734	-		MPMX19_02280	0.53	-0.4
2,398,734	-		MPMX19_02280	0.53	-0.6
2,398,734	-		MPMX19_02280	0.53	-2.4
2,398,734	-		MPMX19_02280	0.53	+0.9
2,398,799	+		MPMX19_02280	0.61	+0.1
2,398,799	+		MPMX19_02280	0.61	-0.3
2,398,799	+		MPMX19_02280	0.61	-1.2
2,398,799	+		MPMX19_02280	0.61	+0.4
2,398,800	-		MPMX19_02280	0.61	+0.6
2,398,800	-		MPMX19_02280	0.61	-0.9
2,398,800	-		MPMX19_02280	0.61	-0.2
2,398,928	+		MPMX19_02280	0.77	+0.2
2,398,928	+		MPMX19_02280	0.77	-0.3
2,398,928	+		MPMX19_02280	0.77	-0.9
2,398,928	+		MPMX19_02280	0.77	-1.7
2,398,928	+		MPMX19_02280	0.77	+0.1
2,398,928	+		MPMX19_02280	0.77	+1.0
2,398,928	+		MPMX19_02280	0.77	-0.0
2,398,929	-		MPMX19_02280	0.77	-0.5
2,398,929	-		MPMX19_02280	0.77	-2.0
2,398,929	-		MPMX19_02280	0.77	-0.3
2,398,929	-		MPMX19_02280	0.77	-0.7
2,398,929	-		MPMX19_02280	0.77	+0.2
2,398,929	-		MPMX19_02280	0.77	-2.6
2,398,979	+		MPMX19_02280	0.83	-0.3
2,398,979	+		MPMX19_02280	0.83	-1.5
2,398,979	+		MPMX19_02280	0.83	-0.7
2,398,979	+		MPMX19_02280	0.83	-1.1
2,398,979	+		MPMX19_02280	0.83	-0.8
2,398,979	+		MPMX19_02280	0.83	-0.4
2,398,979	+		MPMX19_02280	0.83	-0.4
2,398,979	+		MPMX19_02280	0.83	-1.6
2,398,979	+		MPMX19_02280	0.83	-0.4
2,398,979	+		MPMX19_02280	0.83	-1.9
2,398,979	+		MPMX19_02280	0.83	+0.1
2,398,979	+		MPMX19_02280	0.83	-0.5
2,398,979	+		MPMX19_02280	0.83	-0.2
2,398,979	+		MPMX19_02280	0.83	-1.1
2,398,979	+		MPMX19_02280	0.83	-1.0
2,398,979	+		MPMX19_02280	0.83	+0.4
2,398,979	+		MPMX19_02280	0.83	-0.0
2,398,980	-		MPMX19_02280	0.83	-1.0
2,398,980	-		MPMX19_02280	0.83	-1.1
2,398,980	-		MPMX19_02280	0.83	+0.4
2,398,980	-		MPMX19_02280	0.83	+0.4
2,398,980	-		MPMX19_02280	0.83	-2.9
2,398,980	-		MPMX19_02280	0.83	-1.3
2,398,980	-		MPMX19_02280	0.83	-0.8
2,398,980	-		MPMX19_02280	0.83	-1.5
2,398,980	-		MPMX19_02280	0.83	-0.6
2,398,980	-		MPMX19_02280	0.83	-0.5
2,398,980	-		MPMX19_02280	0.83	-0.2
2,398,980	-		MPMX19_02280	0.83	-0.9
2,398,980	-		MPMX19_02280	0.83	-1.1
2,398,980	-		MPMX19_02280	0.83	-0.6
2,398,980	-		MPMX19_02280	0.83	+0.7
2,398,980	-		MPMX19_02280	0.83	+0.1
2,398,985	+		MPMX19_02280	0.84	-0.7
2,398,985	+		MPMX19_02280	0.84	-1.4
2,398,985	+		MPMX19_02280	0.84	-0.7
2,398,985	+		MPMX19_02280	0.84	-0.4
2,398,985	+		MPMX19_02280	0.84	+1.3
2,398,985	+		MPMX19_02280	0.84	-1.0
2,398,985	+		MPMX19_02280	0.84	-1.0
2,398,985	+		MPMX19_02280	0.84	-0.8
2,398,985	+		MPMX19_02280	0.84	-0.4
2,398,985	+		MPMX19_02280	0.84	+1.2
2,398,985	+		MPMX19_02280	0.84	-0.2
2,398,985	+		MPMX19_02280	0.84	+0.8
2,398,985	+		MPMX19_02280	0.84	+1.0
2,398,985	+		MPMX19_02280	0.84	-0.2
2,398,985	+		MPMX19_02280	0.84	+1.0
2,398,985	+		MPMX19_02280	0.84	-0.4
2,398,985	+		MPMX19_02280	0.84	+0.2
2,398,985	+		MPMX19_02280	0.84	-1.0
2,398,985	+		MPMX19_02280	0.84	-0.9
2,398,985	+		MPMX19_02280	0.84	-0.9
2,398,985	+		MPMX19_02280	0.84	+0.7
2,398,985	+		MPMX19_02280	0.84	-0.5
2,398,985	+		MPMX19_02280	0.84	-1.6
2,398,985	+		MPMX19_02280	0.84	+0.6
2,398,986	-		MPMX19_02280	0.84	-2.1
2,398,986	-		MPMX19_02280	0.84	+0.1
2,398,986	-		MPMX19_02280	0.84	-1.0
2,398,986	-		MPMX19_02280	0.84	+0.5
2,398,986	-		MPMX19_02280	0.84	-0.2
2,398,986	-		MPMX19_02280	0.84	-0.6
2,398,986	-		MPMX19_02280	0.84	+1.0
2,398,986	-		MPMX19_02280	0.84	-0.9
2,398,986	-		MPMX19_02280	0.84	-0.4
2,398,986	-		MPMX19_02280	0.84	+0.5
2,398,986	-		MPMX19_02280	0.84	-0.8
2,398,986	-		MPMX19_02280	0.84	-0.4
2,398,986	-		MPMX19_02280	0.84	+0.0
2,398,986	-		MPMX19_02280	0.84	-0.0
2,398,986	-		MPMX19_02280	0.84	-0.0
2,398,986	-		MPMX19_02280	0.84	-0.9
2,398,986	-		MPMX19_02280	0.84	+0.5
2,398,986	-		MPMX19_02280	0.84	+0.3
2,398,986	-		MPMX19_02280	0.84	-0.7
2,398,986	-		MPMX19_02280	0.84	-0.9
2,398,986	-		MPMX19_02280	0.84	-0.0
2,399,060	+				+0.5
2,399,060	+				+0.7
2,399,060	+				-1.7
2,399,060	+				-1.0
2,399,060	+				-1.0
2,399,061	-				+0.1
2,399,061	-				+0.5
2,399,138	+				-0.7
2,399,138	+				+0.5
2,399,138	+				-0.4
2,399,138	+				-0.6
2,399,138	+				+0.1
2,399,138	+				-0.9
2,399,138	+				-0.6
2,399,138	+				-0.8
2,399,138	+				+0.1
2,399,138	+				-0.2
2,399,138	+				-0.9
2,399,138	+				-0.3
2,399,138	+				-0.5
2,399,138	+				+0.1
2,399,138	+				-1.2
2,399,138	+				+0.4
2,399,138	+				+0.5
2,399,138	+				-0.9
2,399,138	+				-0.6
2,399,138	+				-0.8
2,399,138	+				-0.2
2,399,138	+				-0.0
2,399,138	+				+0.2
2,399,138	+				+0.2
2,399,138	+				-0.5
2,399,138	+				-1.6
2,399,138	+				-0.6
2,399,138	+				-2.2
2,399,138	+				+1.0
2,399,138	+				+1.0
2,399,138	+				-1.2
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