Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02074

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
2,170,433	+		MPMX19_02073	0.16	-0.9
2,170,434	-		MPMX19_02073	0.16	+0.6
2,170,434	-		MPMX19_02073	0.16	-1.0
2,170,946	+		MPMX19_02073	0.67	-1.6
2,170,946	+		MPMX19_02073	0.67	+0.3
2,170,946	+		MPMX19_02073	0.67	-0.1
2,170,946	+		MPMX19_02073	0.67	+0.9
2,170,946	+		MPMX19_02073	0.67	-0.2
2,170,946	+		MPMX19_02073	0.67	-0.2
2,170,946	+		MPMX19_02073	0.67	+1.1
2,170,946	+		MPMX19_02073	0.67	-0.9
2,170,946	+		MPMX19_02073	0.67	-0.7
2,170,946	+		MPMX19_02073	0.67	+1.3
2,170,946	+		MPMX19_02073	0.67	-0.5
2,170,946	+		MPMX19_02073	0.67	-0.5
2,170,946	+		MPMX19_02073	0.67	-1.1
2,170,946	+		MPMX19_02073	0.67	-0.6
2,170,946	+		MPMX19_02073	0.67	+0.3
2,170,946	+		MPMX19_02073	0.67	-0.1
2,170,946	+		MPMX19_02073	0.67	+1.0
2,170,946	+		MPMX19_02073	0.67	-0.1
2,170,946	+		MPMX19_02073	0.67	-0.9
2,170,947	-		MPMX19_02073	0.67	-0.3
2,170,947	-		MPMX19_02073	0.67	-0.7
2,170,947	-		MPMX19_02073	0.67	-1.6
2,170,947	-		MPMX19_02073	0.67	-2.2
2,170,947	-		MPMX19_02073	0.67	-0.9
2,170,947	-		MPMX19_02073	0.67	+0.3
2,170,947	-		MPMX19_02073	0.67	+0.2
2,170,947	-		MPMX19_02073	0.67	-0.6
2,170,947	-		MPMX19_02073	0.67	+0.1
2,170,947	-		MPMX19_02073	0.67	-0.6
2,170,947	-		MPMX19_02073	0.67	+0.9
2,170,947	-		MPMX19_02073	0.67	-3.7
2,170,947	-		MPMX19_02073	0.67	-1.5
2,170,947	-		MPMX19_02073	0.67	+0.3
2,170,947	-		MPMX19_02073	0.67	-1.7
2,170,947	-		MPMX19_02073	0.67	-0.0
2,170,947	-		MPMX19_02073	0.67	-0.6
2,170,947	-		MPMX19_02073	0.67	-0.3
2,170,947	-		MPMX19_02073	0.67	-0.7
2,170,947	-		MPMX19_02073	0.67	-1.7
2,170,947	-		MPMX19_02073	0.67	+0.6
2,170,947	-		MPMX19_02073	0.67	-0.8
2,171,024	+		MPMX19_02073	0.74	+0.5
2,171,024	+		MPMX19_02073	0.74	+1.3
2,171,024	+		MPMX19_02073	0.74	-1.1
2,171,024	+		MPMX19_02073	0.74	-0.1
2,171,024	+		MPMX19_02073	0.74	-0.3
2,171,024	+		MPMX19_02073	0.74	-0.3
2,171,024	+		MPMX19_02073	0.74	-1.7
2,171,025	-		MPMX19_02073	0.75	+0.6
2,171,025	-		MPMX19_02073	0.75	+0.9
2,171,025	-		MPMX19_02073	0.75	-0.6
2,171,025	-		MPMX19_02073	0.75	-0.7
2,171,048	+		MPMX19_02073	0.77	+0.3
2,171,048	+		MPMX19_02073	0.77	+1.7
2,171,048	+		MPMX19_02073	0.77	-0.9
2,171,049	-		MPMX19_02073	0.77	-0.9
2,171,049	-		MPMX19_02073	0.77	-1.2
2,171,126	+		MPMX19_02073	0.84	+1.6
2,171,126	+		MPMX19_02073	0.84	-0.5
2,171,126	+		MPMX19_02073	0.84	+0.5
2,171,126	+		MPMX19_02073	0.84	+1.3
2,171,126	+		MPMX19_02073	0.84	+0.1
2,171,126	+		MPMX19_02073	0.84	-1.5
2,171,126	+		MPMX19_02073	0.84	-0.6
2,171,127	-		MPMX19_02073	0.85	+1.7
2,171,127	-		MPMX19_02073	0.85	-1.8
2,171,127	-		MPMX19_02073	0.85	+0.5
2,171,127	-		MPMX19_02073	0.85	+0.1
2,171,324	+				-1.5
2,171,324	+				+0.1
2,171,324	+				+1.7
2,171,324	+				+0.6
2,171,325	-				-0.9
2,171,325	-				+0.3
2,171,325	-				-0.1
2,171,325	-				-0.0
2,171,325	-				-0.0
2,171,325	-				-0.3
2,171,325	-				-1.5
2,171,358	+				-0.1
2,171,359	-				-1.1
2,171,359	-				-1.1
2,171,391	+				+0.2
2,171,391	+				+2.3
2,171,391	+				+0.4
2,171,391	+				-0.5
2,171,391	+				-0.8
2,171,391	+				+0.3
2,171,391	+				-0.3
2,171,391	+				-0.6
2,171,391	+				+0.7
2,171,392	-				+0.1
2,171,392	-				+0.3
2,171,392	-				+0.5
2,171,392	-				+0.3
2,171,392	-				-0.4
2,171,472	+		MPMX19_02074	0.12	-0.4
2,171,472	+		MPMX19_02074	0.12	+1.4
2,171,472	+		MPMX19_02074	0.12	-2.2
2,171,472	+		MPMX19_02074	0.12	-0.8
2,171,472	+		MPMX19_02074	0.12	+0.1
2,171,473	-		MPMX19_02074	0.12	-1.3
2,171,473	-		MPMX19_02074	0.12	-0.9
2,171,473	-		MPMX19_02074	0.12	-0.5
2,171,514	+		MPMX19_02074	0.16	+1.6
2,171,514	+		MPMX19_02074	0.16	-0.7
2,171,514	+		MPMX19_02074	0.16	-1.7
2,171,514	+		MPMX19_02074	0.16	-0.5
2,171,514	+		MPMX19_02074	0.16	-1.3
2,171,514	+		MPMX19_02074	0.16	+1.5
2,171,514	+		MPMX19_02074	0.16	-0.9
2,171,514	+		MPMX19_02074	0.16	+0.2
2,171,514	+		MPMX19_02074	0.16	+0.3
2,171,514	+		MPMX19_02074	0.16	+1.1
2,171,514	+		MPMX19_02074	0.16	-0.3
2,171,514	+		MPMX19_02074	0.16	-1.1
2,171,514	+		MPMX19_02074	0.16	+1.2
2,171,514	+		MPMX19_02074	0.16	-0.2
2,171,514	+		MPMX19_02074	0.16	+0.4
2,171,514	+		MPMX19_02074	0.16	+1.4
2,171,514	+		MPMX19_02074	0.16	+0.1
2,171,514	+		MPMX19_02074	0.16	+1.1
2,171,514	+		MPMX19_02074	0.16	-0.6
2,171,514	+		MPMX19_02074	0.16	-2.7
2,171,514	+		MPMX19_02074	0.16	+0.7
2,171,514	+		MPMX19_02074	0.16	+1.0
2,171,514	+		MPMX19_02074	0.16	+0.4
2,171,514	+		MPMX19_02074	0.16	+0.5
2,171,514	+		MPMX19_02074	0.16	-0.7
2,171,514	+		MPMX19_02074	0.16	+0.7
2,171,514	+		MPMX19_02074	0.16	-1.5
2,171,514	+		MPMX19_02074	0.16	-0.0
2,171,514	+		MPMX19_02074	0.16	-1.3
2,171,514	+		MPMX19_02074	0.16	-0.7
2,171,515	-		MPMX19_02074	0.16	+0.4
2,171,515	-		MPMX19_02074	0.16	+0.1
2,171,515	-		MPMX19_02074	0.16	-0.1
2,171,515	-		MPMX19_02074	0.16	-1.0
2,171,515	-		MPMX19_02074	0.16	-0.1
2,171,515	-		MPMX19_02074	0.16	-0.0
2,171,515	-		MPMX19_02074	0.16	-1.3
2,171,515	-		MPMX19_02074	0.16	+1.7
2,171,515	-		MPMX19_02074	0.16	-0.3
2,171,515	-		MPMX19_02074	0.16	-0.1
2,171,515	-		MPMX19_02074	0.16	-1.5
2,171,515	-		MPMX19_02074	0.16	-0.5
2,171,515	-		MPMX19_02074	0.16	+0.4
2,171,515	-		MPMX19_02074	0.16	-0.3
2,171,515	-		MPMX19_02074	0.16	-1.3
2,171,515	-		MPMX19_02074	0.16	+0.9
2,171,515	-		MPMX19_02074	0.16	-0.5
2,171,515	-		MPMX19_02074	0.16	-0.2
2,171,515	-		MPMX19_02074	0.16	+1.7
2,171,515	-		MPMX19_02074	0.16	+0.9
2,171,515	-		MPMX19_02074	0.16	-0.3
2,171,515	-		MPMX19_02074	0.16	+1.1
2,171,515	-		MPMX19_02074	0.16	-0.5
2,171,515	-		MPMX19_02074	0.16	-1.5
2,171,515	-		MPMX19_02074	0.16	-0.9
2,171,515	-		MPMX19_02074	0.16	-0.7
2,171,515	-		MPMX19_02074	0.16	-0.9
2,171,568	+		MPMX19_02074	0.21	-0.5
2,171,568	+		MPMX19_02074	0.21	-0.1
2,171,568	+		MPMX19_02074	0.21	-0.7
2,171,568	+		MPMX19_02074	0.21	-0.4
2,171,568	+		MPMX19_02074	0.21	-0.1
2,171,568	+		MPMX19_02074	0.21	+0.3
2,171,568	+		MPMX19_02074	0.21	+0.1
2,171,568	+		MPMX19_02074	0.21	+0.1
2,171,569	-		MPMX19_02074	0.21	-0.8
2,171,569	-		MPMX19_02074	0.21	-0.7
2,171,569	-		MPMX19_02074	0.21	+0.3
2,171,569	-		MPMX19_02074	0.21	-0.5
2,171,569	-		MPMX19_02074	0.21	-0.8
2,171,569	-		MPMX19_02074	0.21	-1.1
2,171,569	-		MPMX19_02074	0.21	+0.4
2,171,569	-		MPMX19_02074	0.21	-0.1
2,171,569	-		MPMX19_02074	0.21	+0.4
2,171,604	+		MPMX19_02074	0.24	+0.3
2,171,604	+		MPMX19_02074	0.24	-0.5
2,171,604	+		MPMX19_02074	0.24	+0.5
2,171,604	+		MPMX19_02074	0.24	+0.4
2,171,604	+		MPMX19_02074	0.24	-0.9
2,171,604	+		MPMX19_02074	0.24	+0.5
2,171,604	+		MPMX19_02074	0.24	+0.3
2,171,604	+		MPMX19_02074	0.24	-0.7
2,171,604	+		MPMX19_02074	0.24	+0.3
2,171,604	+		MPMX19_02074	0.24	-0.3
2,171,604	+		MPMX19_02074	0.24	+0.9
2,171,604	+		MPMX19_02074	0.24	+0.4
2,171,604	+		MPMX19_02074	0.24	+0.9
2,171,605	-		MPMX19_02074	0.24	-0.6
2,171,605	-		MPMX19_02074	0.24	-0.1
2,171,605	-		MPMX19_02074	0.24	+0.3
2,171,605	-		MPMX19_02074	0.24	+0.6
2,171,605	-		MPMX19_02074	0.24	-0.2
2,171,605	-		MPMX19_02074	0.24	-1.5
2,171,605	-		MPMX19_02074	0.24	-0.6
2,171,605	-		MPMX19_02074	0.24	-0.6
2,171,605	-		MPMX19_02074	0.24	-0.5
2,171,605	-		MPMX19_02074	0.24	+0.6
2,171,605	-		MPMX19_02074	0.24	+0.7
2,171,605	-		MPMX19_02074	0.24	-0.5
2,171,605	-		MPMX19_02074	0.24	+0.2
2,171,605	-		MPMX19_02074	0.24	-0.1
2,171,605	-		MPMX19_02074	0.24	+0.7
2,171,605	-		MPMX19_02074	0.24	-1.6
2,171,605	-		MPMX19_02074	0.24	-0.9
2,171,605	-		MPMX19_02074	0.24	-0.3
2,171,607	+		MPMX19_02074	0.24	-1.4
2,171,607	+		MPMX19_02074	0.24	+0.5
2,171,607	+		MPMX19_02074	0.24	+0.1
2,171,607	+		MPMX19_02074	0.24	+0.3
2,171,607	+		MPMX19_02074	0.24	-1.3
2,171,607	+		MPMX19_02074	0.24	-1.5
2,171,607	+		MPMX19_02074	0.24	-0.2
2,171,607	+		MPMX19_02074	0.24	-1.4
2,171,607	+		MPMX19_02074	0.24	+1.4
2,171,607	+		MPMX19_02074	0.24	-1.1
2,171,607	+		MPMX19_02074	0.24	-0.9
2,171,608	-		MPMX19_02074	0.24	-1.0
2,171,608	-		MPMX19_02074	0.24	-1.1
2,171,608	-		MPMX19_02074	0.24	-0.1
2,171,608	-		MPMX19_02074	0.24	-0.1
2,171,608	-		MPMX19_02074	0.24	-0.3
2,171,608	-		MPMX19_02074	0.24	-2.8
2,171,608	-		MPMX19_02074	0.24	-0.4
2,171,608	-		MPMX19_02074	0.24	-1.1
2,171,652	-		MPMX19_02074	0.28	-1.9
2,171,715	+		MPMX19_02074	0.34	-0.1
2,171,715	+		MPMX19_02074	0.34	+1.1
2,171,716	-		MPMX19_02074	0.34	+0.7
2,171,716	-		MPMX19_02074	0.34	+0.9
2,171,811	+		MPMX19_02074	0.42	+0.7
2,171,812	-		MPMX19_02074	0.43	-1.3
2,171,812	-		MPMX19_02074	0.43	-0.5
2,171,812	-		MPMX19_02074	0.43	-0.6
2,171,812	-		MPMX19_02074	0.43	-0.7
2,171,967	+		MPMX19_02074	0.56	+0.2
2,171,968	-		MPMX19_02074	0.56	+0.9
2,171,968	-		MPMX19_02074	0.56	-0.7
2,171,968	-		MPMX19_02074	0.56	-0.0
2,171,987	+		MPMX19_02074	0.58	-0.5
2,171,987	+		MPMX19_02074	0.58	-0.0
2,171,987	+		MPMX19_02074	0.58	-0.1
2,171,988	-		MPMX19_02074	0.58	+0.3
2,171,988	-		MPMX19_02074	0.58	-1.0
2,172,054	+		MPMX19_02074	0.64	-0.3
2,172,054	+		MPMX19_02074	0.64	-0.0
2,172,054	+		MPMX19_02074	0.64	+0.3
2,172,054	+		MPMX19_02074	0.64	+1.1
2,172,054	+		MPMX19_02074	0.64	+0.8
2,172,054	+		MPMX19_02074	0.64	+0.4
2,172,054	+		MPMX19_02074	0.64	-1.7
2,172,054	+		MPMX19_02074	0.64	-0.1
2,172,054	+		MPMX19_02074	0.64	-0.4
2,172,054	+		MPMX19_02074	0.64	+0.5
2,172,054	+		MPMX19_02074	0.64	-0.5
2,172,054	+		MPMX19_02074	0.64	-0.9
2,172,055	-		MPMX19_02074	0.64	-0.9
2,172,055	-		MPMX19_02074	0.64	+0.9
2,172,055	-		MPMX19_02074	0.64	+0.4
2,172,055	-		MPMX19_02074	0.64	-1.4
2,172,055	-		MPMX19_02074	0.64	-0.1
2,172,055	-		MPMX19_02074	0.64	-1.0
2,172,055	-		MPMX19_02074	0.64	+0.6
2,172,055	-		MPMX19_02074	0.64	+0.6
2,172,055	-		MPMX19_02074	0.64	-0.8
2,172,055	-		MPMX19_02074	0.64	-0.1
2,172,055	-		MPMX19_02074	0.64	-0.7
2,172,055	-		MPMX19_02074	0.64	+0.1
2,172,055	-		MPMX19_02074	0.64	+0.9
2,172,055	-		MPMX19_02074	0.64	-1.5
2,172,084	+		MPMX19_02074	0.67	-0.8
2,172,084	+		MPMX19_02074	0.67	+0.3
2,172,084	+		MPMX19_02074	0.67	-1.3
2,172,085	-		MPMX19_02074	0.67	+0.4
2,172,085	-		MPMX19_02074	0.67	-1.7
2,172,085	-		MPMX19_02074	0.67	-0.4
2,172,085	-		MPMX19_02074	0.67	-1.8
2,172,085	-		MPMX19_02074	0.67	+0.8
2,172,085	-		MPMX19_02074	0.67	+0.3
2,172,085	-		MPMX19_02074	0.67	+0.4
2,172,085	-		MPMX19_02074	0.67	+0.1
2,172,244	+		MPMX19_02074	0.81	+0.5
2,172,244	+		MPMX19_02074	0.81	+1.6
2,172,245	-		MPMX19_02074	0.81	+0.2
2,172,245	-		MPMX19_02074	0.81	+0.5
2,172,245	-		MPMX19_02074	0.81	-1.6
2,172,378	+				-0.9
2,172,378	+				-0.8
2,172,378	+				+0.9
2,172,378	+				+0.5
2,172,378	+				+0.3
2,172,378	+				-0.3
2,172,378	+				+1.1
2,172,378	+				-0.1
2,172,378	+				-1.4
2,172,378	+				+1.1
2,172,378	+				-0.7
2,172,378	+				+0.4
2,172,379	+				+0.9
2,172,379	-				-0.6
2,172,379	-				+0.9
2,172,379	-				-1.2
2,172,379	-				-1.4
2,172,379	-				+0.5
2,172,379	-				-0.3
2,172,379	-				-1.1
2,172,379	-				-0.8
2,172,379	-				+0.4
2,172,379	-				-1.6
2,172,379	-				-1.7
2,172,379	-				-0.7
2,172,379	-				-0.1
2,172,379	-				-0.0
2,172,379	-				-0.7
2,172,379	-				-0.7
2,172,422	-				+1.2
2,172,565	-				-0.5
2,172,565	-				-0.8
2,172,565	-				-0.7
2,172,597	+				-0.9
2,172,597	+				-0.3
2,172,597	+				-0.2
2,172,597	+				-0.7
2,172,598	-				+0.4
2,172,598	-				-0.9
2,172,598	-				+0.9
2,172,598	-				-0.0
2,172,709	+		MPMX19_02075	0.17	+1.3
2,172,760	+		MPMX19_02075	0.26	-0.7
2,172,760	+		MPMX19_02075	0.26	-0.0
2,172,760	+		MPMX19_02075	0.26	-1.9
2,172,760	+		MPMX19_02075	0.26	+0.3
2,172,760	+		MPMX19_02075	0.26	-1.3
2,172,760	+		MPMX19_02075	0.26	-0.6
2,172,760	+		MPMX19_02075	0.26	+0.6
2,172,760	+		MPMX19_02075	0.26	-0.1
2,172,760	+		MPMX19_02075	0.26	-1.6
2,172,760	+		MPMX19_02075	0.26	+0.2
2,172,761	-		MPMX19_02075	0.27	+0.1
2,172,988	+		MPMX19_02075	0.68	-0.8
2,172,988	+		MPMX19_02075	0.68	-2.0
2,172,988	+		MPMX19_02075	0.68	-0.2
2,172,988	+		MPMX19_02075	0.68	-1.2
2,172,988	+		MPMX19_02075	0.68	+2.1
2,172,989	-		MPMX19_02075	0.68	-0.5
2,172,989	-		MPMX19_02075	0.68	+1.0
2,172,989	-		MPMX19_02075	0.68	-0.1
2,172,989	-		MPMX19_02075	0.68	+0.5
2,172,989	-		MPMX19_02075	0.68	-0.2
2,172,989	-		MPMX19_02075	0.68	+0.1
2,172,989	-		MPMX19_02075	0.68	+1.9
2,172,989	-		MPMX19_02075	0.68	-0.0
2,172,989	-		MPMX19_02075	0.68	-0.5
2,173,018	+		MPMX19_02075	0.74	-1.3
2,173,018	+		MPMX19_02075	0.74	+1.5
2,173,018	+		MPMX19_02075	0.74	-1.1
2,173,018	+		MPMX19_02075	0.74	-2.1
2,173,018	+		MPMX19_02075	0.74	+0.3
2,173,018	+		MPMX19_02075	0.74	+0.0
2,173,018	+		MPMX19_02075	0.74	-1.7
2,173,018	+		MPMX19_02075	0.74	-1.5
2,173,018	+		MPMX19_02075	0.74	-0.2
2,173,019	-		MPMX19_02075	0.74	-0.6
2,173,019	-		MPMX19_02075	0.74	-1.3
2,173,019	-		MPMX19_02075	0.74	+0.1
2,173,019	-		MPMX19_02075	0.74	+0.0
2,173,019	-		MPMX19_02075	0.74	-0.8
2,173,019	-		MPMX19_02075	0.74	+0.0
2,173,159	+				-1.0
2,173,159	+				-0.3
2,173,159	+				+0.0
2,173,160	-				-0.6
2,173,160	-				-0.1
2,173,160	-				-0.1
2,173,160	-				-0.2
2,173,298	+		MPMX19_02076	0.20	-1.3
2,173,298	+		MPMX19_02076	0.20	+1.4
2,173,298	+		MPMX19_02076	0.20	-0.9
2,173,299	-		MPMX19_02076	0.20	-0.1
2,173,299	-		MPMX19_02076	0.20	-0.5
2,173,299	-		MPMX19_02076	0.20	-1.9
2,173,299	-		MPMX19_02076	0.20	-0.3
2,173,299	-		MPMX19_02076	0.20	-0.6
2,173,299	-		MPMX19_02076	0.20	-0.5
2,173,299	-		MPMX19_02076	0.20	+0.3