Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01987

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
2,068,853	+		MPMX19_01986	0.31	-0.7
2,068,853	+		MPMX19_01986	0.31	+0.5
2,068,853	+		MPMX19_01986	0.31	-0.5
2,068,853	+		MPMX19_01986	0.31	-0.5
2,068,853	+		MPMX19_01986	0.31	+0.1
2,068,853	+		MPMX19_01986	0.31	-0.4
2,068,853	+		MPMX19_01986	0.31	-0.8
2,068,853	+		MPMX19_01986	0.31	+0.1
2,068,853	+		MPMX19_01986	0.31	-0.3
2,068,853	+		MPMX19_01986	0.31	-0.1
2,068,853	+		MPMX19_01986	0.31	-2.1
2,068,853	+		MPMX19_01986	0.31	-1.6
2,068,853	+		MPMX19_01986	0.31	+0.7
2,068,853	+		MPMX19_01986	0.31	-0.9
2,068,853	+		MPMX19_01986	0.31	-2.7
2,068,853	+		MPMX19_01986	0.31	+0.0
2,068,853	+		MPMX19_01986	0.31	-1.4
2,068,853	+		MPMX19_01986	0.31	+0.4
2,068,853	+		MPMX19_01986	0.31	-0.8
2,068,853	+		MPMX19_01986	0.31	-2.1
2,068,853	+		MPMX19_01986	0.31	+0.0
2,068,853	+		MPMX19_01986	0.31	-0.2
2,068,853	+		MPMX19_01986	0.31	-1.7
2,068,854	-		MPMX19_01986	0.31	-1.0
2,068,854	-		MPMX19_01986	0.31	+0.4
2,068,854	-		MPMX19_01986	0.31	-0.8
2,068,854	-		MPMX19_01986	0.31	-1.8
2,068,854	-		MPMX19_01986	0.31	+0.7
2,068,854	-		MPMX19_01986	0.31	-0.1
2,068,854	-		MPMX19_01986	0.31	-0.3
2,068,854	-		MPMX19_01986	0.31	-1.0
2,068,854	-		MPMX19_01986	0.31	-0.0
2,068,854	-		MPMX19_01986	0.31	+0.2
2,068,854	-		MPMX19_01986	0.31	+1.0
2,068,854	-		MPMX19_01986	0.31	-0.0
2,068,854	-		MPMX19_01986	0.31	+0.6
2,068,854	-		MPMX19_01986	0.31	+0.2
2,068,854	-		MPMX19_01986	0.31	+0.2
2,068,854	-		MPMX19_01986	0.31	+0.5
2,068,854	-		MPMX19_01986	0.31	+0.4
2,068,854	-		MPMX19_01986	0.31	-0.3
2,069,171	+		MPMX19_01986	0.51	-1.5
2,069,171	+		MPMX19_01986	0.51	-0.2
2,069,171	+		MPMX19_01986	0.51	-1.0
2,069,171	+		MPMX19_01986	0.51	+0.4
2,069,172	-		MPMX19_01986	0.51	-1.1
2,069,172	-		MPMX19_01986	0.51	-1.2
2,069,172	-		MPMX19_01986	0.51	-0.9
2,069,172	-		MPMX19_01986	0.51	-0.2
2,069,172	-		MPMX19_01986	0.51	-1.9
2,069,201	+		MPMX19_01986	0.53	-1.0
2,069,201	+		MPMX19_01986	0.53	+1.6
2,069,201	+		MPMX19_01986	0.53	-0.1
2,069,201	+		MPMX19_01986	0.53	-0.2
2,069,201	+		MPMX19_01986	0.53	+0.7
2,069,201	+		MPMX19_01986	0.53	-1.5
2,069,201	+		MPMX19_01986	0.53	-0.4
2,069,201	+		MPMX19_01986	0.53	-0.0
2,069,201	+		MPMX19_01986	0.53	-1.6
2,069,201	+		MPMX19_01986	0.53	-0.3
2,069,201	+		MPMX19_01986	0.53	-0.4
2,069,202	-		MPMX19_01986	0.53	-0.8
2,069,202	-		MPMX19_01986	0.53	-2.0
2,069,202	-		MPMX19_01986	0.53	+0.6
2,069,249	+		MPMX19_01986	0.56	-0.0
2,069,249	+		MPMX19_01986	0.56	+0.8
2,069,249	+		MPMX19_01986	0.56	+0.4
2,069,249	+		MPMX19_01986	0.56	+1.4
2,069,249	+		MPMX19_01986	0.56	+0.2
2,069,250	-		MPMX19_01986	0.56	-0.2
2,069,250	-		MPMX19_01986	0.56	-1.5
2,069,250	-		MPMX19_01986	0.56	+1.2
2,069,250	-		MPMX19_01986	0.56	+0.7
2,069,264	+		MPMX19_01986	0.57	-0.5
2,069,264	+		MPMX19_01986	0.57	-0.4
2,069,264	+		MPMX19_01986	0.57	+2.6
2,069,264	+		MPMX19_01986	0.57	-0.2
2,069,265	-		MPMX19_01986	0.57	-1.3
2,069,265	-		MPMX19_01986	0.57	+0.0
2,069,265	-		MPMX19_01986	0.57	+0.2
2,069,265	-		MPMX19_01986	0.57	-0.5
2,069,265	-		MPMX19_01986	0.57	-2.4
2,069,498	+		MPMX19_01986	0.71	-1.0
2,069,498	+		MPMX19_01986	0.71	-1.4
2,069,498	+		MPMX19_01986	0.71	-1.0
2,069,498	+		MPMX19_01986	0.71	-0.2
2,069,498	+		MPMX19_01986	0.71	+1.2
2,069,499	-		MPMX19_01986	0.72	+0.4
2,069,499	-		MPMX19_01986	0.72	-0.9
2,069,499	-		MPMX19_01986	0.72	+0.2
2,069,499	-		MPMX19_01986	0.72	+0.1
2,069,499	-		MPMX19_01986	0.72	-0.2
2,069,727	-		MPMX19_01986	0.86	+0.4
2,069,949	-				+0.1
2,070,175	+		MPMX19_01987	0.29	+0.4
2,070,239	+		MPMX19_01987	0.35	-1.1
2,070,239	+		MPMX19_01987	0.35	-0.4
2,070,239	+		MPMX19_01987	0.35	-1.3
2,070,239	+		MPMX19_01987	0.35	-1.2
2,070,239	+		MPMX19_01987	0.35	+0.8
2,070,239	+		MPMX19_01987	0.35	-0.5
2,070,239	+		MPMX19_01987	0.35	+0.2
2,070,240	-		MPMX19_01987	0.35	-0.8
2,070,240	-		MPMX19_01987	0.35	-1.0
2,070,240	-		MPMX19_01987	0.35	-2.2
2,070,240	-		MPMX19_01987	0.35	-0.6
2,070,240	-		MPMX19_01987	0.35	-0.4
2,070,824	+		MPMX19_01987	0.88	-0.4
2,070,824	+		MPMX19_01987	0.88	-1.8
2,070,824	+		MPMX19_01987	0.88	-0.6
2,070,824	+		MPMX19_01987	0.88	-1.8
2,070,824	+		MPMX19_01987	0.88	+0.1
2,070,824	+		MPMX19_01987	0.88	-1.3
2,070,824	+		MPMX19_01987	0.88	-1.3
2,070,825	-		MPMX19_01987	0.88	+0.0
2,070,996	+				-0.5
2,070,996	+				-1.7
2,070,996	+				-0.4
2,070,996	+				+0.1
2,070,996	+				-0.8
2,070,996	+				-0.5
2,070,996	+				-0.0
2,070,997	-				-0.3
2,070,997	-				-0.3
2,070,997	-				-0.3
2,070,997	-				+0.2
2,070,997	-				-0.3
2,070,997	-				-0.5
2,070,997	-				-1.5
2,070,997	-				-0.5
2,070,997	-				-0.3
2,070,997	-				-0.1
2,070,997	-				+0.2
2,070,997	-				-0.0
2,070,997	-				-0.1
2,070,997	-				-0.8
2,070,997	-				-2.6
2,070,997	-				-1.3
2,070,997	-				-1.9
2,070,997	-				-1.3
2,071,061	+				+1.8
2,071,061	+				-0.7
2,071,061	+				-0.7
2,071,061	+				-1.7
2,071,061	+				+0.5
2,071,061	+				-1.0
2,071,061	+				-0.7
2,071,061	+				+0.2
2,071,061	+				-1.2
2,071,062	-				-0.0
2,071,062	-				-2.1
2,071,062	-				-0.6
2,071,062	-				+0.2
2,071,062	-				-1.2
2,071,062	-				-1.6
2,071,062	-				-1.9
2,071,062	-				-0.9
2,071,253	+		MPMX19_01988	0.29	+1.5
2,071,253	+		MPMX19_01988	0.29	-1.0
2,071,253	+		MPMX19_01988	0.29	+0.5
2,071,253	+		MPMX19_01988	0.29	-1.3
2,071,253	+		MPMX19_01988	0.29	+0.3
2,071,253	+		MPMX19_01988	0.29	-2.0
2,071,253	+		MPMX19_01988	0.29	-0.8
2,071,253	+		MPMX19_01988	0.29	+1.3
2,071,253	+		MPMX19_01988	0.29	-0.5
2,071,253	+		MPMX19_01988	0.29	-0.9
2,071,253	+		MPMX19_01988	0.29	-0.7
2,071,253	+		MPMX19_01988	0.29	-0.3
2,071,254	-		MPMX19_01988	0.29	-0.1
2,071,254	-		MPMX19_01988	0.29	-1.2
2,071,254	-		MPMX19_01988	0.29	-0.1
2,071,254	-		MPMX19_01988	0.29	-0.8
2,071,254	-		MPMX19_01988	0.29	+0.2
2,071,254	-		MPMX19_01988	0.29	-0.7
2,071,254	-		MPMX19_01988	0.29	-1.3
2,071,254	-		MPMX19_01988	0.29	-1.1
2,071,254	-		MPMX19_01988	0.29	-0.0
2,071,254	-		MPMX19_01988	0.29	-0.3
2,071,254	-		MPMX19_01988	0.29	+0.2
2,071,254	-		MPMX19_01988	0.29	-0.0
2,071,254	-		MPMX19_01988	0.29	+0.1
2,071,535	+		MPMX19_01988	0.62	-1.3
2,071,535	+		MPMX19_01988	0.62	+0.4
2,071,535	+		MPMX19_01988	0.62	+0.1
2,071,535	+		MPMX19_01988	0.62	-1.3
2,071,536	-		MPMX19_01988	0.62	+1.5
2,071,536	-		MPMX19_01988	0.62	-0.2
2,071,536	-		MPMX19_01988	0.62	-1.1
2,071,536	-		MPMX19_01988	0.62	+0.4
2,071,536	-		MPMX19_01988	0.62	+3.1
2,071,778	+				+0.3
2,071,778	+				-1.6
2,071,778	+				-0.8
2,071,778	+				-0.4
2,071,778	+				+0.0
2,071,778	+				-1.3
2,071,779	-				+0.0
2,071,779	-				-0.7
2,071,814	+				+0.1
2,071,814	+				-1.0
2,071,814	+				-1.3
2,071,814	+				-0.8
2,071,814	+				-1.1
2,071,815	-				-2.0
2,071,815	-				-1.8
2,071,815	-				-0.0
2,071,815	-				-1.0
2,071,815	-				-1.4
2,071,945	+				-0.9
2,071,945	+				-0.8
2,071,945	+				-1.2
2,071,945	+				-0.5
2,071,945	+				-0.0
2,071,946	-				-1.6
2,071,946	-				-0.6
2,071,946	-				-1.8
2,071,946	-				+0.0
2,071,946	-				-0.3
2,071,946	-				+0.3