Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01620

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NL-CCM; ambient oxygen
				remove
1,698,836	-	MPMX19_01619	0.58	+0.5
1,698,883	+	MPMX19_01619	0.60	-0.1
1,698,883	+	MPMX19_01619	0.60	+0.2
1,698,883	+	MPMX19_01619	0.60	-1.6
1,698,883	+	MPMX19_01619	0.60	+0.2
1,698,883	-	MPMX19_01619	0.60	-0.5
1,698,884	-	MPMX19_01619	0.60	-1.0
1,698,884	-	MPMX19_01619	0.60	-1.8
1,698,884	-	MPMX19_01619	0.60	+0.7
1,698,884	-	MPMX19_01619	0.60	-1.2
1,698,884	-	MPMX19_01619	0.60	-2.2
1,698,884	-	MPMX19_01619	0.60	-0.5
1,698,884	-	MPMX19_01619	0.60	-1.1
1,698,884	-	MPMX19_01619	0.60	+1.4
1,699,024	+	MPMX19_01619	0.68	+0.2
1,699,024	+	MPMX19_01619	0.68	-0.1
1,699,024	+	MPMX19_01619	0.68	-0.5
1,699,024	+	MPMX19_01619	0.68	-0.9
1,699,114	+	MPMX19_01619	0.72	-0.5
1,699,114	+	MPMX19_01619	0.72	+0.6
1,699,114	+	MPMX19_01619	0.72	-0.4
1,699,114	+	MPMX19_01619	0.72	-1.9
1,699,114	+	MPMX19_01619	0.72	+0.2
1,699,114	+	MPMX19_01619	0.72	-1.8
1,699,114	+	MPMX19_01619	0.72	-1.8
1,699,114	+	MPMX19_01619	0.72	+0.6
1,699,114	+	MPMX19_01619	0.72	-0.7
1,699,114	+	MPMX19_01619	0.72	+0.6
1,699,114	+	MPMX19_01619	0.72	-0.4
1,699,114	+	MPMX19_01619	0.72	-0.7
1,699,114	+	MPMX19_01619	0.72	-1.9
1,699,114	+	MPMX19_01619	0.72	-0.4
1,699,114	+	MPMX19_01619	0.72	+0.6
1,699,114	+	MPMX19_01619	0.72	+0.2
1,699,114	+	MPMX19_01619	0.72	-0.7
1,699,114	+	MPMX19_01619	0.72	+1.0
1,699,114	+	MPMX19_01619	0.72	-0.3
1,699,114	+	MPMX19_01619	0.72	+0.9
1,699,114	+	MPMX19_01619	0.72	+0.4
1,699,114	+	MPMX19_01619	0.72	+0.1
1,699,114	+	MPMX19_01619	0.72	+0.1
1,699,114	+	MPMX19_01619	0.72	+0.7
1,699,114	+	MPMX19_01619	0.72	+0.5
1,699,114	+	MPMX19_01619	0.72	-0.1
1,699,114	+	MPMX19_01619	0.72	-0.5
1,699,114	+	MPMX19_01619	0.72	-1.1
1,699,114	+	MPMX19_01619	0.72	-1.0
1,699,114	+	MPMX19_01619	0.72	-1.4
1,699,114	+	MPMX19_01619	0.72	+0.1
1,699,114	+	MPMX19_01619	0.72	-0.9
1,699,114	+	MPMX19_01619	0.72	+0.5
1,699,114	+	MPMX19_01619	0.72	-0.0
1,699,114	+	MPMX19_01619	0.72	-1.9
1,699,114	+	MPMX19_01619	0.72	+1.4
1,699,115	-	MPMX19_01619	0.72	+0.5
1,699,115	-	MPMX19_01619	0.72	-0.1
1,699,115	-	MPMX19_01619	0.72	-1.5
1,699,115	-	MPMX19_01619	0.72	-0.6
1,699,115	-	MPMX19_01619	0.72	-0.3
1,699,115	-	MPMX19_01619	0.72	-1.1
1,699,115	-	MPMX19_01619	0.72	-0.5
1,699,115	-	MPMX19_01619	0.72	-0.4
1,699,115	-	MPMX19_01619	0.72	-1.0
1,699,115	-	MPMX19_01619	0.72	-1.1
1,699,115	-	MPMX19_01619	0.72	-1.0
1,699,115	-	MPMX19_01619	0.72	-0.0
1,699,115	-	MPMX19_01619	0.72	-0.9
1,699,115	-	MPMX19_01619	0.72	-1.0
1,699,115	-	MPMX19_01619	0.72	-0.6
1,699,115	-	MPMX19_01619	0.72	+0.4
1,699,115	-	MPMX19_01619	0.72	-0.1
1,699,115	-	MPMX19_01619	0.72	+0.5
1,699,115	-	MPMX19_01619	0.72	-2.1
1,699,115	-	MPMX19_01619	0.72	+0.6
1,699,115	-	MPMX19_01619	0.72	+0.8
1,699,115	-	MPMX19_01619	0.72	-1.3
1,699,115	-	MPMX19_01619	0.72	-1.2
1,699,115	-	MPMX19_01619	0.72	-0.0
1,699,115	-	MPMX19_01619	0.72	-1.5
1,699,115	-	MPMX19_01619	0.72	-1.4
1,699,115	-	MPMX19_01619	0.72	-1.0
1,699,115	-	MPMX19_01619	0.72	-0.0
1,699,115	-	MPMX19_01619	0.72	-1.3
1,699,115	-	MPMX19_01619	0.72	+0.8
1,699,115	-	MPMX19_01619	0.72	+0.2
1,699,115	-	MPMX19_01619	0.72	-0.2
1,699,115	-	MPMX19_01619	0.72	+0.6
1,699,115	-	MPMX19_01619	0.72	-1.3
1,699,115	-	MPMX19_01619	0.72	+0.9
1,699,115	-	MPMX19_01619	0.72	-0.9
1,699,115	-	MPMX19_01619	0.72	-1.1
1,699,115	-	MPMX19_01619	0.72	-0.4
1,699,183	+	MPMX19_01619	0.76	-1.2
1,699,183	+	MPMX19_01619	0.76	-1.0
1,699,183	+	MPMX19_01619	0.76	+0.6
1,699,184	-	MPMX19_01619	0.76	-0.6
1,699,184	-	MPMX19_01619	0.76	-2.0
1,699,184	-	MPMX19_01619	0.76	-0.3
1,699,184	-	MPMX19_01619	0.76	-1.8
1,699,184	-	MPMX19_01619	0.76	+0.2
1,699,220	+	MPMX19_01619	0.78	-0.8
1,699,220	+	MPMX19_01619	0.78	+1.0
1,699,603	+			-0.5
1,699,603	+			-0.3
1,699,603	+			-0.8
1,699,603	+			-0.2
1,699,603	+			-0.2
1,699,603	+			+0.1
1,699,603	+			-0.0
1,699,603	+			-1.2
1,699,603	+			-1.4
1,699,603	+			+0.5
1,699,603	+			-1.9
1,699,603	+			-1.2
1,699,603	+			+0.2
1,699,603	+			-0.2
1,699,603	+			-0.8
1,699,603	+			+0.1
1,699,603	+			+0.2
1,699,603	+			-0.2
1,699,604	-			+0.2
1,699,604	-			-1.3
1,699,604	-			+0.8
1,699,604	-			-0.2
1,699,604	-			-1.2
1,699,604	-			-1.4
1,699,604	-			-1.9
1,699,604	-			-0.5
1,699,627	-			+0.8
1,699,627	-			-0.2
1,699,651	+			+0.5
1,699,651	+			+1.2
1,699,651	+			-1.6
1,699,651	+			-1.1
1,699,652	-			-0.6
1,699,652	-			+0.6
1,699,652	-			-0.8
1,699,652	-			-0.5
1,699,652	-			+1.1
1,699,652	-			-1.0
1,699,784	+	MPMX19_01620	0.40	-0.6
1,699,784	+	MPMX19_01620	0.40	-0.9
1,699,784	+	MPMX19_01620	0.40	+0.8
1,699,784	+	MPMX19_01620	0.40	+0.1
1,699,784	+	MPMX19_01620	0.40	+0.8
1,699,784	+	MPMX19_01620	0.40	-0.6
1,699,784	+	MPMX19_01620	0.40	+1.6
1,699,784	+	MPMX19_01620	0.40	+0.2
1,699,784	+	MPMX19_01620	0.40	+0.8
1,699,784	+	MPMX19_01620	0.40	-0.5
1,699,784	+	MPMX19_01620	0.40	+0.5
1,699,784	+	MPMX19_01620	0.40	+1.5
1,699,784	+	MPMX19_01620	0.40	-0.7
1,699,784	+	MPMX19_01620	0.40	-1.8
1,699,784	+	MPMX19_01620	0.40	-0.5
1,699,784	+	MPMX19_01620	0.40	+2.4
1,699,784	+	MPMX19_01620	0.40	-0.5
1,699,785	-	MPMX19_01620	0.40	-0.5
1,699,785	-	MPMX19_01620	0.40	-0.3
1,699,785	-	MPMX19_01620	0.40	-1.4
1,699,785	-	MPMX19_01620	0.40	-1.0
1,699,785	-	MPMX19_01620	0.40	-1.1
1,699,785	-	MPMX19_01620	0.40	+1.0
1,699,785	-	MPMX19_01620	0.40	-1.2
1,699,785	-	MPMX19_01620	0.40	-1.2
1,699,785	-	MPMX19_01620	0.40	-0.2
1,699,785	-	MPMX19_01620	0.40	-0.9
1,699,785	-	MPMX19_01620	0.40	-1.1
1,699,785	-	MPMX19_01620	0.40	-1.2
1,699,785	-	MPMX19_01620	0.40	-1.8
1,699,785	-	MPMX19_01620	0.40	+0.8
1,699,785	-	MPMX19_01620	0.40	+0.5
1,699,785	-	MPMX19_01620	0.40	-0.5
1,700,027	-			-1.7
1,700,037	+			+0.1
1,700,038	-			-1.0
1,700,055	+			-1.4
1,700,055	+			-0.3
1,700,130	+	MPMX19_01621	0.13	-0.2
1,700,130	+	MPMX19_01621	0.13	-0.7
1,700,130	+	MPMX19_01621	0.13	+0.2
1,700,131	-	MPMX19_01621	0.13	-1.7
1,700,307	+	MPMX19_01621	0.42	-0.7
1,700,307	+	MPMX19_01621	0.42	-0.1
1,700,307	+	MPMX19_01621	0.42	-0.5
1,700,307	+	MPMX19_01621	0.42	-1.4
1,700,307	+	MPMX19_01621	0.42	-0.8
1,700,307	+	MPMX19_01621	0.42	-0.4
1,700,308	-	MPMX19_01621	0.42	-0.3
1,700,308	-	MPMX19_01621	0.42	+0.4
1,700,308	-	MPMX19_01621	0.42	+0.6
1,700,308	-	MPMX19_01621	0.42	-1.5
1,700,308	-	MPMX19_01621	0.42	-1.7
1,700,308	-	MPMX19_01621	0.42	-1.7
1,700,308	-	MPMX19_01621	0.42	-0.5
1,700,308	-	MPMX19_01621	0.42	-0.8
1,700,308	-	MPMX19_01621	0.42	+0.4
1,700,308	-	MPMX19_01621	0.42	+0.3
1,700,308	-	MPMX19_01621	0.42	-0.3
1,700,388	+	MPMX19_01621	0.55	-1.2
1,700,388	+	MPMX19_01621	0.55	-0.3
1,700,388	+	MPMX19_01621	0.55	-0.4
1,700,388	+	MPMX19_01621	0.55	+0.2
1,700,389	-	MPMX19_01621	0.55	+0.5
1,700,389	-	MPMX19_01621	0.55	-1.1
1,700,389	-	MPMX19_01621	0.55	+1.1
1,700,762	-			+0.1
1,700,762	-			-1.4
1,700,875	+	MPMX19_01622	0.15	-0.9
1,700,875	+	MPMX19_01622	0.15	+1.2
1,700,875	+	MPMX19_01622	0.15	-1.9
1,700,876	-	MPMX19_01622	0.15	-0.6
1,700,876	-	MPMX19_01622	0.15	-1.7
1,700,876	-	MPMX19_01622	0.15	-2.0
1,700,876	-	MPMX19_01622	0.15	+0.0
1,700,876	-	MPMX19_01622	0.15	-0.6
1,700,876	-	MPMX19_01622	0.15	+1.8
1,700,876	-	MPMX19_01622	0.15	+0.4

Or see this region's nucleotide sequence