Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01284

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
1,339,680	+		MPMX19_01283	0.71	-0.6
1,339,680	+		MPMX19_01283	0.71	+0.4
1,339,680	+		MPMX19_01283	0.71	-0.7
1,339,681	-		MPMX19_01283	0.71	-1.0
1,339,681	-		MPMX19_01283	0.71	-1.7
1,339,681	-		MPMX19_01283	0.71	-1.2
1,339,681	-		MPMX19_01283	0.71	+0.8
1,339,681	-		MPMX19_01283	0.71	-0.3
1,339,681	-		MPMX19_01283	0.71	+0.2
1,339,760	+		MPMX19_01283	0.84	-0.8
1,339,887	-				+0.2
1,339,887	-				-0.3
1,339,887	-				-0.2
1,339,931	+				-1.0
1,339,932	-				-0.2
1,339,932	-				-1.3
1,339,932	-				-0.6
1,339,932	-				+0.7
1,339,992	+				-0.5
1,339,992	+				-0.2
1,339,992	+				-1.1
1,339,992	+				-1.8
1,339,992	+				+0.4
1,339,992	+				+1.3
1,339,992	+				-2.0
1,339,992	+				-0.5
1,339,992	+				-0.9
1,339,992	+				+0.0
1,339,992	+				-1.0
1,339,992	+				+0.8
1,339,992	+				+0.1
1,339,992	+				+0.2
1,339,992	+				+0.0
1,339,992	+				-1.0
1,339,993	-				-0.0
1,339,993	-				-1.0
1,339,993	-				-1.1
1,339,993	-				-1.3
1,339,993	-				+1.4
1,339,993	-				+0.4
1,339,993	-				-1.6
1,339,993	-				+0.8
1,339,993	-				-1.0
1,340,003	+				-0.9
1,340,003	+				-1.2
1,340,003	+				-1.2
1,340,027	+				+0.8
1,340,027	+				+0.2
1,340,028	-				-0.1
1,340,028	-				+0.4
1,340,106	+				+0.2
1,340,106	+				-0.2
1,340,106	+				+0.5
1,340,114	+				-1.4
1,340,115	-				-2.7
1,340,126	+				-0.7
1,340,153	+				-2.4
1,340,154	-				-2.6
1,340,183	+				-0.7
1,340,184	-				-0.9
1,340,184	-				-0.0
1,340,191	+				+0.2
1,340,192	-				-0.8
1,340,327	+				+0.1
1,340,328	-				-1.4
1,340,435	+		MPMX19_01284	0.15	-0.9
1,340,435	+		MPMX19_01284	0.15	-1.0
1,340,435	+		MPMX19_01284	0.15	-0.5
1,340,435	+		MPMX19_01284	0.15	-0.6
1,340,435	+		MPMX19_01284	0.15	-0.3
1,340,436	-		MPMX19_01284	0.16	+1.0
1,340,436	-		MPMX19_01284	0.16	-2.3
1,340,466	+		MPMX19_01284	0.19	+0.1
1,340,466	+		MPMX19_01284	0.19	+1.2
1,340,466	+		MPMX19_01284	0.19	-0.8
1,340,466	+		MPMX19_01284	0.19	-0.2
1,340,466	+		MPMX19_01284	0.19	-2.4
1,340,466	+		MPMX19_01284	0.19	-0.3
1,340,467	-		MPMX19_01284	0.19	-0.2
1,340,467	-		MPMX19_01284	0.19	-0.3
1,340,467	-		MPMX19_01284	0.19	+0.5
1,340,467	-		MPMX19_01284	0.19	+0.9
1,340,467	-		MPMX19_01284	0.19	-1.2
1,340,467	-		MPMX19_01284	0.19	-2.0
1,340,610	+		MPMX19_01284	0.35	-0.6
1,340,610	+		MPMX19_01284	0.35	-0.9
1,340,610	+		MPMX19_01284	0.35	-2.1
1,340,610	+		MPMX19_01284	0.35	-0.2
1,340,610	+		MPMX19_01284	0.35	+0.4
1,340,610	+		MPMX19_01284	0.35	-0.4
1,340,610	+		MPMX19_01284	0.35	-0.9
1,340,610	+		MPMX19_01284	0.35	-0.5
1,340,610	+		MPMX19_01284	0.35	-0.7
1,340,611	-		MPMX19_01284	0.35	-0.0
1,340,611	-		MPMX19_01284	0.35	-1.0
1,340,613	+		MPMX19_01284	0.35	+1.0
1,340,613	+		MPMX19_01284	0.35	+0.8
1,340,613	+		MPMX19_01284	0.35	-0.9
1,340,613	+		MPMX19_01284	0.35	-0.1
1,340,613	+		MPMX19_01284	0.35	-0.8
1,340,613	+		MPMX19_01284	0.35	-0.6
1,340,613	+		MPMX19_01284	0.35	-1.0
1,340,613	+		MPMX19_01284	0.35	+2.0
1,340,613	+		MPMX19_01284	0.35	-1.0
1,340,613	+		MPMX19_01284	0.35	+0.2
1,340,613	+		MPMX19_01284	0.35	-0.1
1,340,613	+		MPMX19_01284	0.35	-0.0
1,340,613	+		MPMX19_01284	0.35	-1.0
1,340,613	+		MPMX19_01284	0.35	-0.6
1,340,613	+		MPMX19_01284	0.35	-0.1
1,340,613	+		MPMX19_01284	0.35	-1.3
1,340,613	+		MPMX19_01284	0.35	+0.1
1,340,613	+		MPMX19_01284	0.35	-1.0
1,340,613	+		MPMX19_01284	0.35	-1.4
1,340,613	+		MPMX19_01284	0.35	-1.2
1,340,613	+		MPMX19_01284	0.35	-1.9
1,340,613	+		MPMX19_01284	0.35	-0.1
1,340,614	-		MPMX19_01284	0.35	-1.1
1,340,614	-		MPMX19_01284	0.35	+0.9
1,340,614	-		MPMX19_01284	0.35	-1.5
1,340,614	-		MPMX19_01284	0.35	+0.5
1,340,614	-		MPMX19_01284	0.35	+0.2
1,340,614	-		MPMX19_01284	0.35	+0.8
1,340,614	-		MPMX19_01284	0.35	-1.3
1,340,614	-		MPMX19_01284	0.35	+0.8
1,340,614	-		MPMX19_01284	0.35	+0.6
1,340,614	-		MPMX19_01284	0.35	-1.7
1,340,614	-		MPMX19_01284	0.35	+0.3
1,340,614	-		MPMX19_01284	0.35	-1.8
1,340,614	-		MPMX19_01284	0.35	+1.4
1,340,614	-		MPMX19_01284	0.35	-0.8
1,340,614	-		MPMX19_01284	0.35	-0.7
1,340,614	-		MPMX19_01284	0.35	-1.0
1,340,614	-		MPMX19_01284	0.35	+0.8
1,340,614	-		MPMX19_01284	0.35	-1.1
1,340,614	-		MPMX19_01284	0.35	+0.0
1,340,661	+		MPMX19_01284	0.40	-0.7
1,340,661	+		MPMX19_01284	0.40	+0.4
1,340,694	+		MPMX19_01284	0.44	-0.1
1,340,709	+		MPMX19_01284	0.46	-0.1
1,340,709	+		MPMX19_01284	0.46	-1.4
1,340,709	+		MPMX19_01284	0.46	-0.3
1,340,709	+		MPMX19_01284	0.46	-0.2
1,340,709	+		MPMX19_01284	0.46	-0.5
1,340,754	+		MPMX19_01284	0.50	-0.6
1,340,754	+		MPMX19_01284	0.50	-0.2
1,340,754	+		MPMX19_01284	0.50	-0.6
1,340,754	+		MPMX19_01284	0.50	-0.5
1,340,754	+		MPMX19_01284	0.50	-1.1
1,340,754	+		MPMX19_01284	0.50	+1.2
1,340,755	-		MPMX19_01284	0.51	-1.8
1,340,755	-		MPMX19_01284	0.51	-0.8
1,340,755	-		MPMX19_01284	0.51	-0.6
1,340,755	-		MPMX19_01284	0.51	-0.8
1,340,755	-		MPMX19_01284	0.51	+0.9
1,340,755	-		MPMX19_01284	0.51	+0.2
1,340,755	-		MPMX19_01284	0.51	-1.0
1,340,844	+		MPMX19_01284	0.60	+0.2
1,340,844	+		MPMX19_01284	0.60	+0.8
1,340,844	+		MPMX19_01284	0.60	+0.2
1,340,844	+		MPMX19_01284	0.60	-1.7
1,340,844	+		MPMX19_01284	0.60	+0.8
1,340,844	+		MPMX19_01284	0.60	+0.6
1,340,844	+		MPMX19_01284	0.60	-0.2
1,340,844	+		MPMX19_01284	0.60	-0.4
1,340,844	+		MPMX19_01284	0.60	-1.6
1,340,844	+		MPMX19_01284	0.60	-0.6
1,340,844	+		MPMX19_01284	0.60	-0.7
1,340,844	+		MPMX19_01284	0.60	-0.2
1,340,845	-		MPMX19_01284	0.61	-1.8
1,340,845	-		MPMX19_01284	0.61	-0.4
1,340,845	-		MPMX19_01284	0.61	-1.0
1,340,845	-		MPMX19_01284	0.61	+1.0
1,340,845	-		MPMX19_01284	0.61	-0.8
1,340,845	-		MPMX19_01284	0.61	+0.3
1,340,845	-		MPMX19_01284	0.61	+0.2
1,340,845	-		MPMX19_01284	0.61	+0.3
1,341,003	+		MPMX19_01284	0.78	-1.6
1,341,003	+		MPMX19_01284	0.78	-0.3
1,341,003	+		MPMX19_01284	0.78	+0.3
1,341,003	+		MPMX19_01284	0.78	-0.2
1,341,003	+		MPMX19_01284	0.78	-2.0
1,341,003	+		MPMX19_01284	0.78	-1.9
1,341,003	+		MPMX19_01284	0.78	-0.4
1,341,003	+		MPMX19_01284	0.78	-0.7
1,341,003	+		MPMX19_01284	0.78	-1.9
1,341,003	+		MPMX19_01284	0.78	+1.8
1,341,003	+		MPMX19_01284	0.78	+0.8
1,341,003	+		MPMX19_01284	0.78	+0.6
1,341,003	+		MPMX19_01284	0.78	-0.8
1,341,003	+		MPMX19_01284	0.78	-1.2
1,341,003	+		MPMX19_01284	0.78	-1.4
1,341,003	+		MPMX19_01284	0.78	-1.2
1,341,003	+		MPMX19_01284	0.78	-0.2
1,341,003	+		MPMX19_01284	0.78	-0.8
1,341,003	+		MPMX19_01284	0.78	-2.3
1,341,003	+		MPMX19_01284	0.78	+0.9
1,341,003	+		MPMX19_01284	0.78	+0.2
1,341,003	+		MPMX19_01284	0.78	+0.2
1,341,003	+		MPMX19_01284	0.78	-0.7
1,341,003	+		MPMX19_01284	0.78	+0.1
1,341,003	+		MPMX19_01284	0.78	-1.6
1,341,003	+		MPMX19_01284	0.78	+0.3
1,341,003	+		MPMX19_01284	0.78	-0.2
1,341,003	+		MPMX19_01284	0.78	-0.3
1,341,003	+		MPMX19_01284	0.78	-0.8
1,341,003	+		MPMX19_01284	0.78	+0.5
1,341,003	+		MPMX19_01284	0.78	-1.0
1,341,003	+		MPMX19_01284	0.78	-0.7
1,341,003	+		MPMX19_01284	0.78	-2.9
1,341,003	+		MPMX19_01284	0.78	-1.6
1,341,003	+		MPMX19_01284	0.78	-1.5
1,341,003	+		MPMX19_01284	0.78	-1.2
1,341,003	+		MPMX19_01284	0.78	+0.3
1,341,003	+		MPMX19_01284	0.78	-0.2
1,341,003	+		MPMX19_01284	0.78	-0.9
1,341,003	+		MPMX19_01284	0.78	-0.1
1,341,004	-		MPMX19_01284	0.78	-0.2
1,341,004	-		MPMX19_01284	0.78	+0.6
1,341,004	-		MPMX19_01284	0.78	-0.4
1,341,004	-		MPMX19_01284	0.78	-0.6
1,341,004	-		MPMX19_01284	0.78	+0.8
1,341,004	-		MPMX19_01284	0.78	-1.6
1,341,004	-		MPMX19_01284	0.78	-0.6
1,341,004	-		MPMX19_01284	0.78	-0.9
1,341,004	-		MPMX19_01284	0.78	+0.0
1,341,004	-		MPMX19_01284	0.78	-0.6
1,341,004	-		MPMX19_01284	0.78	-0.2
1,341,004	-		MPMX19_01284	0.78	-0.0
1,341,004	-		MPMX19_01284	0.78	-0.2
1,341,004	-		MPMX19_01284	0.78	-1.0
1,341,004	-		MPMX19_01284	0.78	-0.3
1,341,004	-		MPMX19_01284	0.78	-0.1
1,341,004	-		MPMX19_01284	0.78	-0.0
1,341,004	-		MPMX19_01284	0.78	-0.8
1,341,004	-		MPMX19_01284	0.78	+0.3
1,341,004	-		MPMX19_01284	0.78	+0.1
1,341,004	-		MPMX19_01284	0.78	+0.9
1,341,004	-		MPMX19_01284	0.78	+0.2
1,341,004	-		MPMX19_01284	0.78	+0.8
1,341,004	-		MPMX19_01284	0.78	-1.4
1,341,004	-		MPMX19_01284	0.78	-0.1
1,341,004	-		MPMX19_01284	0.78	-1.4
1,341,004	-		MPMX19_01284	0.78	-0.9
1,341,004	-		MPMX19_01284	0.78	-0.0
1,341,004	-		MPMX19_01284	0.78	-0.7
1,341,004	-		MPMX19_01284	0.78	-0.9
1,341,004	-		MPMX19_01284	0.78	+0.2
1,341,004	-		MPMX19_01284	0.78	+0.0
1,341,004	-		MPMX19_01284	0.78	-1.9
1,341,004	-		MPMX19_01284	0.78	+0.4
1,341,004	-		MPMX19_01284	0.78	-0.8
1,341,156	+				+0.2
1,341,156	+				-0.3
1,341,156	+				+0.8
1,341,156	+				+0.1
1,341,156	+				-1.8
1,341,156	+				-1.0
1,341,156	+				-0.0
1,341,156	+				-0.6
1,341,156	+				+0.6
1,341,156	+				-0.2
1,341,156	+				-0.6
1,341,156	+				-0.6
1,341,156	+				-2.1
1,341,156	+				-1.4
1,341,156	+				-1.6
1,341,156	+				-0.8
1,341,156	+				+0.0
1,341,156	+				+1.8
1,341,156	+				-0.2
1,341,156	+				-0.6
1,341,156	+				+0.7
1,341,156	+				+1.4
1,341,156	+				+1.3
1,341,156	+				+0.1
1,341,156	+				-0.8
1,341,156	+				-0.9
1,341,156	+				-0.5
1,341,156	+				-1.4
1,341,156	+				+0.1
1,341,156	+				-0.8
1,341,156	+				+0.8
1,341,156	+				+0.2
1,341,156	+				-0.0
1,341,156	+				-0.0
1,341,157	-				+1.0
1,341,157	-				-0.2
1,341,157	-				-1.4
1,341,157	-				-0.7
1,341,157	-				+0.6
1,341,157	-				-1.9
1,341,157	-				-0.8
1,341,157	-				+0.8
1,341,157	-				+0.5
1,341,157	-				-0.1
1,341,157	-				-0.2
1,341,157	-				-0.1
1,341,157	-				+0.1
1,341,157	-				-0.5
1,341,157	-				-0.4
1,341,157	-				+1.0
1,341,157	-				+0.8
1,341,157	-				+0.2
1,341,157	-				-0.2
1,341,157	-				-1.2
1,341,321	+		MPMX19_01285	0.11	-0.6
1,341,321	+		MPMX19_01285	0.11	+0.2
1,341,321	+		MPMX19_01285	0.11	-1.2
1,341,349	+		MPMX19_01285	0.16	+0.6
1,341,524	+		MPMX19_01285	0.45	-0.8
1,341,524	+		MPMX19_01285	0.45	-0.2
1,341,524	+		MPMX19_01285	0.45	+1.4
1,341,524	+		MPMX19_01285	0.45	-0.3
1,341,525	-		MPMX19_01285	0.45	-0.1
1,341,525	-		MPMX19_01285	0.45	-0.3
1,341,543	+		MPMX19_01285	0.48	+0.1
1,341,543	+		MPMX19_01285	0.48	+1.0
1,341,543	+		MPMX19_01285	0.48	-0.7
1,341,543	+		MPMX19_01285	0.48	-1.5
1,341,543	+		MPMX19_01285	0.48	-0.6
1,341,543	+		MPMX19_01285	0.48	-0.8
1,341,543	+		MPMX19_01285	0.48	-0.9
1,341,543	+		MPMX19_01285	0.48	+0.3
1,341,543	+		MPMX19_01285	0.48	-0.7
1,341,543	+		MPMX19_01285	0.48	+0.7
1,341,543	+		MPMX19_01285	0.48	+0.2
1,341,543	+		MPMX19_01285	0.48	-0.6
1,341,543	+		MPMX19_01285	0.48	-1.8
1,341,543	+		MPMX19_01285	0.48	-1.9
1,341,543	+		MPMX19_01285	0.48	+0.5
1,341,543	+		MPMX19_01285	0.48	-1.1
1,341,543	+		MPMX19_01285	0.48	-0.3
1,341,544	-		MPMX19_01285	0.49	-0.2
1,341,544	-		MPMX19_01285	0.49	+0.0
1,341,544	-		MPMX19_01285	0.49	-1.3
1,341,544	-		MPMX19_01285	0.49	-0.2
1,341,544	-		MPMX19_01285	0.49	-1.0
1,341,544	-		MPMX19_01285	0.49	+0.2
1,341,544	-		MPMX19_01285	0.49	+0.1
1,341,544	-		MPMX19_01285	0.49	-1.1
1,341,544	-		MPMX19_01285	0.49	+0.8
1,341,544	-		MPMX19_01285	0.49	-0.6
1,341,568	+		MPMX19_01285	0.53	+0.2
1,341,568	+		MPMX19_01285	0.53	+0.5
1,341,569	-		MPMX19_01285	0.53	+0.2
1,341,798	+				+0.0
1,341,798	+				-0.2
1,341,798	+				-1.7
1,341,798	+				+0.2
1,341,798	+				+0.2
1,341,798	+				+0.4
1,341,798	+				+0.5
1,341,798	+				-1.3
1,341,798	+				-0.8
1,341,798	+				-1.5
1,341,799	+				-2.2
1,341,799	-				-0.7
1,341,799	-				-0.0
1,341,799	-				-0.6
1,341,799	-				+0.2
1,341,799	-				+0.4
1,341,799	-				-0.5
1,341,799	-				+0.9
1,341,799	-				-0.8
1,341,799	-				-0.5
1,341,799	-				-1.2
1,341,799	-				-0.6
1,341,799	-				-0.6
1,341,882	+				+0.8
1,341,882	+				+0.2
1,341,882	+				+0.5
1,341,882	+				-0.6
1,341,910	+				-1.0
1,341,910	+				-0.3
1,341,910	+				-2.0
1,341,910	+				-1.7
1,341,910	+				+0.1
1,341,910	+				+0.5
1,341,911	-				+1.1
1,341,911	-				-1.9
1,341,911	-				-0.0
1,341,911	-				+0.1
1,342,013	+				-1.5
1,342,013	+				-0.8
1,342,013	+				+0.5
1,342,014	-				+0.2
1,342,014	-				-0.2
1,342,048	+				+0.2
1,342,049	-				+0.2
1,342,049	-				-0.1
1,342,049	-				+1.0
1,342,049	-				-1.2
1,342,049	-				-1.0
1,342,124	+		MPMX19_01286	0.17	+0.8
1,342,124	+		MPMX19_01286	0.17	-0.4
1,342,124	+		MPMX19_01286	0.17	-0.3
1,342,124	+		MPMX19_01286	0.17	+0.5
1,342,124	+		MPMX19_01286	0.17	-0.7
1,342,124	+		MPMX19_01286	0.17	-0.6
1,342,124	+		MPMX19_01286	0.17	+0.2
1,342,124	+		MPMX19_01286	0.17	-1.1
1,342,124	+		MPMX19_01286	0.17	+0.1
1,342,124	+		MPMX19_01286	0.17	-0.6
1,342,124	+		MPMX19_01286	0.17	-0.3
1,342,124	+		MPMX19_01286	0.17	-0.7
1,342,124	+		MPMX19_01286	0.17	+1.1
1,342,124	+		MPMX19_01286	0.17	+0.7
1,342,124	+		MPMX19_01286	0.17	-1.4
1,342,124	+		MPMX19_01286	0.17	+0.2
1,342,124	+		MPMX19_01286	0.17	+1.0
1,342,125	-		MPMX19_01286	0.17	+0.4
1,342,125	-		MPMX19_01286	0.17	+0.5
1,342,125	-		MPMX19_01286	0.17	+0.5
1,342,125	-		MPMX19_01286	0.17	-0.2
1,342,125	-		MPMX19_01286	0.17	+1.0
1,342,125	-		MPMX19_01286	0.17	-0.6
1,342,125	-		MPMX19_01286	0.17	-1.4
1,342,125	-		MPMX19_01286	0.17	-0.6
1,342,125	-		MPMX19_01286	0.17	-0.2
1,342,125	-		MPMX19_01286	0.17	-0.7
1,342,125	-		MPMX19_01286	0.17	-0.5
1,342,125	-		MPMX19_01286	0.17	-0.6
1,342,125	-		MPMX19_01286	0.17	+2.2
1,342,128	+		MPMX19_01286	0.17	-1.4
1,342,128	+		MPMX19_01286	0.17	+0.3
1,342,128	+		MPMX19_01286	0.17	-0.4
1,342,128	+		MPMX19_01286	0.17	-1.0
1,342,128	+		MPMX19_01286	0.17	-2.1
1,342,129	-		MPMX19_01286	0.17	+0.3
1,342,129	-		MPMX19_01286	0.17	-0.7