Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01270

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
1,325,012	+		MPMX19_01269	0.65	-0.7
1,325,012	+		MPMX19_01269	0.65	-1.1
1,325,012	+		MPMX19_01269	0.65	-1.0
1,325,013	-		MPMX19_01269	0.65	-0.6
1,325,013	-		MPMX19_01269	0.65	+0.3
1,325,013	-		MPMX19_01269	0.65	-0.0
1,325,013	-		MPMX19_01269	0.65	+0.3
1,325,013	-		MPMX19_01269	0.65	-0.2
1,325,013	-		MPMX19_01269	0.65	-0.7
1,325,036	+		MPMX19_01269	0.66	-0.1
1,325,036	+		MPMX19_01269	0.66	+0.8
1,325,036	+		MPMX19_01269	0.66	+0.3
1,325,036	+		MPMX19_01269	0.66	-1.0
1,325,036	+		MPMX19_01269	0.66	-0.4
1,325,036	+		MPMX19_01269	0.66	+1.0
1,325,036	+		MPMX19_01269	0.66	+1.2
1,325,036	+		MPMX19_01269	0.66	+0.2
1,325,037	-		MPMX19_01269	0.66	-0.1
1,325,037	-		MPMX19_01269	0.66	+0.1
1,325,037	-		MPMX19_01269	0.66	-0.6
1,325,037	-		MPMX19_01269	0.66	-1.0
1,325,037	-		MPMX19_01269	0.66	+0.2
1,325,037	-		MPMX19_01269	0.66	-0.6
1,325,037	-		MPMX19_01269	0.66	+0.1
1,325,037	-		MPMX19_01269	0.66	+0.2
1,325,039	+		MPMX19_01269	0.66	-0.6
1,325,039	+		MPMX19_01269	0.66	-0.7
1,325,039	+		MPMX19_01269	0.66	-0.6
1,325,039	+		MPMX19_01269	0.66	-1.2
1,325,039	+		MPMX19_01269	0.66	-0.4
1,325,039	+		MPMX19_01269	0.66	-1.6
1,325,039	+		MPMX19_01269	0.66	+0.2
1,325,039	+		MPMX19_01269	0.66	-0.6
1,325,039	+		MPMX19_01269	0.66	-1.4
1,325,039	+		MPMX19_01269	0.66	-0.9
1,325,039	+		MPMX19_01269	0.66	+0.1
1,325,039	+		MPMX19_01269	0.66	+1.2
1,325,039	+		MPMX19_01269	0.66	+0.4
1,325,039	+		MPMX19_01269	0.66	-1.0
1,325,039	+		MPMX19_01269	0.66	+0.7
1,325,039	+		MPMX19_01269	0.66	-0.2
1,325,039	+		MPMX19_01269	0.66	+0.2
1,325,039	+		MPMX19_01269	0.66	-1.2
1,325,039	+		MPMX19_01269	0.66	-0.7
1,325,040	-		MPMX19_01269	0.66	-0.1
1,325,040	-		MPMX19_01269	0.66	-1.0
1,325,040	-		MPMX19_01269	0.66	-1.9
1,325,040	-		MPMX19_01269	0.66	-0.5
1,325,040	-		MPMX19_01269	0.66	+0.2
1,325,040	-		MPMX19_01269	0.66	-0.8
1,325,040	-		MPMX19_01269	0.66	-0.9
1,325,040	-		MPMX19_01269	0.66	+0.8
1,325,040	-		MPMX19_01269	0.66	+1.4
1,325,040	-		MPMX19_01269	0.66	-1.0
1,325,040	-		MPMX19_01269	0.66	+1.0
1,325,040	-		MPMX19_01269	0.66	-0.4
1,325,040	-		MPMX19_01269	0.66	-1.2
1,325,040	-		MPMX19_01269	0.66	-0.0
1,325,040	-		MPMX19_01269	0.66	-0.4
1,325,040	-		MPMX19_01269	0.66	-1.7
1,325,040	-		MPMX19_01269	0.66	-0.4
1,325,040	-		MPMX19_01269	0.66	+0.1
1,325,040	-		MPMX19_01269	0.66	-0.6
1,325,040	-		MPMX19_01269	0.66	-0.2
1,325,040	-		MPMX19_01269	0.66	+0.2
1,325,040	-		MPMX19_01269	0.66	+0.1
1,325,040	-		MPMX19_01269	0.66	-1.2
1,325,040	-		MPMX19_01269	0.66	-1.4
1,325,040	-		MPMX19_01269	0.66	-1.0
1,325,114	+		MPMX19_01269	0.68	+0.2
1,325,114	+		MPMX19_01269	0.68	-1.0
1,325,114	+		MPMX19_01269	0.68	+0.2
1,325,114	+		MPMX19_01269	0.68	-1.2
1,325,114	+		MPMX19_01269	0.68	-0.7
1,325,114	+		MPMX19_01269	0.68	-1.1
1,325,114	+		MPMX19_01269	0.68	+0.4
1,325,114	+		MPMX19_01269	0.68	-0.5
1,325,115	-		MPMX19_01269	0.68	+0.8
1,325,121	-		MPMX19_01269	0.69	+1.5
1,325,121	-		MPMX19_01269	0.69	-0.9
1,325,273	+		MPMX19_01269	0.74	-0.0
1,325,273	+		MPMX19_01269	0.74	-1.1
1,325,274	-		MPMX19_01269	0.74	-0.7
1,325,435	+		MPMX19_01269	0.80	-0.0
1,325,435	+		MPMX19_01269	0.80	-0.3
1,325,435	+		MPMX19_01269	0.80	+0.1
1,325,435	+		MPMX19_01269	0.80	-1.9
1,325,436	-		MPMX19_01269	0.80	-1.6
1,325,436	-		MPMX19_01269	0.80	+0.6
1,325,436	-		MPMX19_01269	0.80	-0.6
1,325,436	-		MPMX19_01269	0.80	-1.2
1,325,436	-		MPMX19_01269	0.80	-1.2
1,325,436	-		MPMX19_01269	0.80	-0.8
1,325,436	-		MPMX19_01269	0.80	+0.4
1,325,795	+				-0.9
1,325,795	+				+0.6
1,325,795	+				+1.5
1,325,795	+				+0.4
1,325,795	+				-1.9
1,325,795	+				-0.4
1,325,795	+				+0.2
1,325,795	+				-0.1
1,325,795	+				-0.6
1,325,795	+				-0.3
1,325,795	+				-0.8
1,325,795	+				-0.7
1,325,796	-				+0.2
1,325,796	-				-0.1
1,325,796	-				-1.6
1,325,796	-				-0.8
1,325,914	+				+0.4
1,325,914	+				+0.4
1,325,915	-				+1.2
1,325,915	-				+0.8
1,325,981	-				+2.2
1,326,005	+				+0.5
1,326,005	+				-0.6
1,326,006	-				+0.1
1,326,006	-				-0.7
1,326,436	+		MPMX19_01270	0.36	-0.1
1,326,436	+		MPMX19_01270	0.36	-0.0
1,326,436	+		MPMX19_01270	0.36	-1.8
1,326,436	+		MPMX19_01270	0.36	-0.2
1,326,437	-		MPMX19_01270	0.36	-1.7
1,326,437	-		MPMX19_01270	0.36	-0.9
1,326,437	-		MPMX19_01270	0.36	-1.1
1,326,617	-		MPMX19_01270	0.51	+0.8
1,326,784	+		MPMX19_01270	0.65	-0.2
1,326,785	-		MPMX19_01270	0.65	-0.1
1,326,955	+		MPMX19_01270	0.79	-1.2
1,326,955	+		MPMX19_01270	0.79	-0.2
1,326,955	+		MPMX19_01270	0.79	-0.8
1,326,955	+		MPMX19_01270	0.79	-1.6
1,326,955	+		MPMX19_01270	0.79	-0.2
1,326,955	+		MPMX19_01270	0.79	-0.2
1,326,955	+		MPMX19_01270	0.79	+0.8
1,326,956	-		MPMX19_01270	0.79	-0.0
1,326,956	-		MPMX19_01270	0.79	-0.8
1,326,956	-		MPMX19_01270	0.79	-0.2
1,326,956	-		MPMX19_01270	0.79	-1.4
1,326,956	-		MPMX19_01270	0.79	+0.3
1,326,956	-		MPMX19_01270	0.79	-0.1
1,326,956	-		MPMX19_01270	0.79	+1.2
1,326,956	-		MPMX19_01270	0.79	-0.9
1,327,210	+				-1.1
1,327,210	+				-0.1
1,327,210	+				-0.0
1,327,211	-				-1.4
1,327,211	-				+0.8
1,327,235	+				-0.8
1,327,235	+				-1.8
1,327,235	+				-0.9
1,327,235	+				+1.4
1,327,235	+				+1.6
1,327,235	+				-1.0
1,327,235	+				-1.8
1,327,235	+				-1.4
1,327,235	+				-0.1
1,327,235	+				-0.6
1,327,235	+				-0.9
1,327,235	+				-1.9
1,327,236	-				-0.7
1,327,236	-				+0.0
1,327,236	-				-0.6
1,327,236	-				-0.0
1,327,236	-				-1.0
1,327,236	-				+0.4
1,327,236	-				+1.3
1,327,236	-				-0.4
1,327,236	-				-1.7
1,327,236	-				+0.6
1,327,236	-				-0.5
1,327,236	-				+0.2
1,327,236	-				-1.0
1,327,236	-				-0.3
1,327,236	-				+0.2
1,327,236	-				-0.6
1,327,236	-				-1.0
1,327,236	-				-1.5
1,327,236	-				+0.2
1,327,236	-				-0.8
1,327,236	-				+0.2
1,327,236	-				-0.9
1,327,572	-		MPMX19_01271	0.45	+1.2
1,327,572	-		MPMX19_01271	0.45	+0.3
1,327,572	-		MPMX19_01271	0.45	-1.3
1,327,572	-		MPMX19_01271	0.45	+0.1
1,327,572	-		MPMX19_01271	0.45	-0.5
1,327,589	+		MPMX19_01271	0.47	+0.8
1,327,589	+		MPMX19_01271	0.47	-2.3
1,327,590	-		MPMX19_01271	0.48	+0.2
1,327,590	-		MPMX19_01271	0.48	-0.7
1,327,590	-		MPMX19_01271	0.48	-0.2
1,327,590	-		MPMX19_01271	0.48	-0.6
1,327,590	-		MPMX19_01271	0.48	-0.2
1,328,041	+				-0.1
1,328,041	+				-0.6
1,328,041	+				-0.5
1,328,041	+				-0.9
1,328,041	+				+0.2
1,328,041	+				-1.8
1,328,042	-				+0.0
1,328,065	+		MPMX19_01272	0.11	-1.4
1,328,065	+		MPMX19_01272	0.11	-1.0
1,328,065	+		MPMX19_01272	0.11	-1.7
1,328,065	+		MPMX19_01272	0.11	-0.2
1,328,065	+		MPMX19_01272	0.11	-1.8
1,328,065	+		MPMX19_01272	0.11	+1.4
1,328,065	+		MPMX19_01272	0.11	+0.7
1,328,065	+		MPMX19_01272	0.11	-0.8
1,328,065	+		MPMX19_01272	0.11	-0.9
1,328,065	+		MPMX19_01272	0.11	-1.0
1,328,065	+		MPMX19_01272	0.11	-0.7
1,328,065	+		MPMX19_01272	0.11	+0.8
1,328,065	+		MPMX19_01272	0.11	+0.6
1,328,065	+		MPMX19_01272	0.11	-2.0
1,328,065	+		MPMX19_01272	0.11	-0.8
1,328,065	+		MPMX19_01272	0.11	-1.0
1,328,065	+		MPMX19_01272	0.11	-0.2
1,328,065	+		MPMX19_01272	0.11	-0.2
1,328,065	+		MPMX19_01272	0.11	+0.4
1,328,065	+		MPMX19_01272	0.11	-0.1
1,328,065	+		MPMX19_01272	0.11	-0.9
1,328,065	+		MPMX19_01272	0.11	-0.8
1,328,065	+		MPMX19_01272	0.11	-1.2
1,328,065	+		MPMX19_01272	0.11	-0.4
1,328,065	+		MPMX19_01272	0.11	-1.2
1,328,066	-		MPMX19_01272	0.11	-0.2
1,328,066	-		MPMX19_01272	0.11	+0.6
1,328,066	-		MPMX19_01272	0.11	-0.2
1,328,066	-		MPMX19_01272	0.11	-0.5
1,328,066	-		MPMX19_01272	0.11	+0.2
1,328,066	-		MPMX19_01272	0.11	-0.2
1,328,066	-		MPMX19_01272	0.11	+0.2
1,328,066	-		MPMX19_01272	0.11	+0.4
1,328,066	-		MPMX19_01272	0.11	+0.5
1,328,066	-		MPMX19_01272	0.11	+0.5
1,328,066	-		MPMX19_01272	0.11	-0.2
1,328,066	-		MPMX19_01272	0.11	-0.6
1,328,066	-		MPMX19_01272	0.11	+0.8
1,328,066	-		MPMX19_01272	0.11	-0.6
1,328,066	-		MPMX19_01272	0.11	-1.8
1,328,066	-		MPMX19_01272	0.11	+0.1
1,328,066	-		MPMX19_01272	0.11	-0.8
1,328,066	-		MPMX19_01272	0.11	-0.8
1,328,066	-		MPMX19_01272	0.11	-1.0
1,328,066	-		MPMX19_01272	0.11	-1.3
1,328,066	-		MPMX19_01272	0.11	-0.6
1,328,066	-		MPMX19_01272	0.11	-1.6
1,328,066	-		MPMX19_01272	0.11	+1.0