Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01195

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
1,244,617	+		MPMX19_01194	0.69	+0.0
1,244,617	+		MPMX19_01194	0.69	+0.2
1,244,617	+		MPMX19_01194	0.69	-0.4
1,244,617	+		MPMX19_01194	0.69	-0.2
1,244,617	+		MPMX19_01194	0.69	-0.7
1,244,617	+		MPMX19_01194	0.69	+0.0
1,244,617	+		MPMX19_01194	0.69	-1.0
1,244,617	+		MPMX19_01194	0.69	-0.2
1,244,617	+		MPMX19_01194	0.69	-0.4
1,244,617	+		MPMX19_01194	0.69	-0.9
1,244,617	+		MPMX19_01194	0.69	-0.2
1,244,617	+		MPMX19_01194	0.69	+0.2
1,244,617	+		MPMX19_01194	0.69	-1.2
1,244,617	+		MPMX19_01194	0.69	+0.8
1,244,617	+		MPMX19_01194	0.69	+0.1
1,244,617	+		MPMX19_01194	0.69	-1.5
1,244,617	+		MPMX19_01194	0.69	-0.6
1,244,617	+		MPMX19_01194	0.69	+1.0
1,244,617	+		MPMX19_01194	0.69	-0.4
1,244,617	+		MPMX19_01194	0.69	-0.2
1,244,618	-		MPMX19_01194	0.69	-0.2
1,244,618	-		MPMX19_01194	0.69	-1.7
1,244,618	-		MPMX19_01194	0.69	+0.5
1,244,618	-		MPMX19_01194	0.69	-0.8
1,244,618	-		MPMX19_01194	0.69	-1.0
1,244,618	-		MPMX19_01194	0.69	+0.1
1,244,618	-		MPMX19_01194	0.69	-0.5
1,244,618	-		MPMX19_01194	0.69	-0.7
1,244,618	-		MPMX19_01194	0.69	-1.8
1,244,618	-		MPMX19_01194	0.69	-2.5
1,244,618	-		MPMX19_01194	0.69	-1.5
1,244,618	-		MPMX19_01194	0.69	-2.8
1,244,619	+		MPMX19_01194	0.69	+0.6
1,244,619	+		MPMX19_01194	0.69	-0.2
1,244,619	+		MPMX19_01194	0.69	+0.4
1,244,619	+		MPMX19_01194	0.69	-1.1
1,244,619	+		MPMX19_01194	0.69	-0.7
1,244,619	+		MPMX19_01194	0.69	-0.9
1,244,619	+		MPMX19_01194	0.69	-1.4
1,244,619	+		MPMX19_01194	0.69	-0.4
1,244,619	+		MPMX19_01194	0.69	-0.1
1,244,619	+		MPMX19_01194	0.69	-1.4
1,244,619	+		MPMX19_01194	0.69	-1.7
1,244,619	+		MPMX19_01194	0.69	-0.3
1,244,619	+		MPMX19_01194	0.69	-0.0
1,244,619	+		MPMX19_01194	0.69	+1.0
1,244,620	-		MPMX19_01194	0.69	-0.0
1,244,620	-		MPMX19_01194	0.69	+0.6
1,244,620	-		MPMX19_01194	0.69	-0.7
1,244,620	-		MPMX19_01194	0.69	-0.8
1,244,620	-		MPMX19_01194	0.69	-1.0
1,244,620	-		MPMX19_01194	0.69	-2.6
1,244,620	-		MPMX19_01194	0.69	-0.4
1,244,620	-		MPMX19_01194	0.69	-0.1
1,244,620	-		MPMX19_01194	0.69	+0.4
1,244,620	-		MPMX19_01194	0.69	-0.5
1,244,727	+		MPMX19_01194	0.73	-0.5
1,244,727	+		MPMX19_01194	0.73	+0.5
1,244,727	+		MPMX19_01194	0.73	+0.4
1,244,727	+		MPMX19_01194	0.73	+0.2
1,244,727	+		MPMX19_01194	0.73	-1.3
1,244,727	+		MPMX19_01194	0.73	+0.7
1,244,727	+		MPMX19_01194	0.73	+0.9
1,244,727	+		MPMX19_01194	0.73	-1.4
1,244,727	+		MPMX19_01194	0.73	-0.2
1,244,727	+		MPMX19_01194	0.73	-1.5
1,244,727	+		MPMX19_01194	0.73	+0.6
1,244,727	+		MPMX19_01194	0.73	-0.6
1,244,727	+		MPMX19_01194	0.73	-0.1
1,244,727	+		MPMX19_01194	0.73	+0.2
1,244,727	+		MPMX19_01194	0.73	+0.4
1,244,728	-		MPMX19_01194	0.73	+0.6
1,244,728	-		MPMX19_01194	0.73	+0.2
1,244,728	-		MPMX19_01194	0.73	+0.6
1,244,728	-		MPMX19_01194	0.73	-0.8
1,244,728	-		MPMX19_01194	0.73	-0.1
1,244,728	-		MPMX19_01194	0.73	-1.5
1,244,728	-		MPMX19_01194	0.73	-1.7
1,244,728	-		MPMX19_01194	0.73	-0.6
1,244,728	-		MPMX19_01194	0.73	+0.8
1,244,728	-		MPMX19_01194	0.73	-0.2
1,244,728	-		MPMX19_01194	0.73	+0.8
1,244,728	-		MPMX19_01194	0.73	-1.1
1,244,728	-		MPMX19_01194	0.73	-0.0
1,244,728	-		MPMX19_01194	0.73	+1.5
1,244,728	-		MPMX19_01194	0.73	-1.4
1,244,728	-		MPMX19_01194	0.73	-0.5
1,244,766	+		MPMX19_01194	0.75	-0.5
1,244,766	+		MPMX19_01194	0.75	-1.2
1,244,767	-		MPMX19_01194	0.75	-0.8
1,244,767	-		MPMX19_01194	0.75	-1.4
1,244,811	+		MPMX19_01194	0.77	-1.7
1,244,811	+		MPMX19_01194	0.77	+0.0
1,244,811	+		MPMX19_01194	0.77	-0.1
1,244,811	+		MPMX19_01194	0.77	-0.7
1,244,812	-		MPMX19_01194	0.77	-0.2
1,244,826	+		MPMX19_01194	0.77	-0.3
1,244,826	+		MPMX19_01194	0.77	-1.0
1,244,826	+		MPMX19_01194	0.77	+0.2
1,244,826	+		MPMX19_01194	0.77	-0.7
1,244,827	-		MPMX19_01194	0.77	-1.8
1,244,827	-		MPMX19_01194	0.77	-1.2
1,244,938	-		MPMX19_01194	0.82	+0.9
1,244,938	-		MPMX19_01194	0.82	+0.8
1,244,938	-		MPMX19_01194	0.82	-0.8
1,244,938	-		MPMX19_01194	0.82	+0.7
1,244,955	+		MPMX19_01194	0.82	-0.7
1,245,168	+				+0.1
1,245,168	+				-0.2
1,245,168	+				+0.9
1,245,168	+				-0.0
1,245,169	-				-0.0
1,245,169	-				-0.1
1,245,169	-				+0.2
1,245,169	-				-0.2
1,245,169	-				-1.4
1,245,169	-				-1.1
1,245,169	-				+0.8
1,245,169	-				-2.1
1,245,171	+				-1.0
1,245,171	+				-0.2
1,245,171	+				-0.7
1,245,171	+				+0.0
1,245,172	-				-0.4
1,245,172	-				-1.1
1,245,172	-				-2.2
1,245,172	-				+0.7
1,245,172	-				-0.5
1,245,172	-				+1.2
1,245,172	-				+0.7
1,245,195	+				-0.0
1,245,195	+				-1.5
1,245,195	+				+1.2
1,245,195	+				+1.5
1,245,195	+				-0.0
1,245,195	+				+0.0
1,245,195	+				+1.3
1,245,195	+				-1.0
1,245,195	+				-2.5
1,245,195	+				-1.8
1,245,196	-				+0.1
1,245,196	-				+2.2
1,245,196	-				-0.6
1,245,196	-				+3.4
1,245,196	-				-0.2
1,245,196	-				-0.0
1,245,196	-				-0.3
1,245,196	-				+0.8
1,245,196	-				-0.5
1,245,196	-				-0.7
1,245,196	-				-0.5
1,245,196	-				+0.2
1,245,198	+				+1.0
1,245,198	+				+0.0
1,245,198	+				+0.2
1,245,198	+				+0.9
1,245,198	+				-0.0
1,245,198	+				-0.5
1,245,198	+				-0.4
1,245,198	+				-0.9
1,245,198	+				-0.1
1,245,198	+				-0.8
1,245,198	+				-0.5
1,245,198	+				-0.8
1,245,199	-				-1.1
1,245,199	-				-0.6
1,245,199	-				+0.8
1,245,199	-				-0.2
1,245,199	-				-0.2
1,245,199	-				-1.1
1,245,199	-				-1.7
1,245,199	-				-0.5
1,245,199	-				-0.8
1,245,199	-				+1.0
1,245,199	-				+0.6
1,245,199	-				+0.0
1,245,199	-				-0.8
1,245,199	-				+1.5
1,245,199	-				-0.1
1,245,199	-				-1.7
1,245,199	-				-1.1
1,245,199	-				-1.4
1,245,309	+				+0.0
1,245,309	+				+0.1
1,245,310	-				+0.6
1,245,425	+				-0.1
1,245,425	+				-0.9
1,245,425	+				-1.0
1,245,425	+				+0.2
1,245,426	-				-1.4
1,245,426	-				-1.3
1,245,426	-				+0.8
1,245,426	-				-1.0
1,245,457	+				+0.2
1,245,457	+				+0.1
1,245,457	+				-0.1
1,245,457	+				+0.9
1,245,457	+				+0.6
1,245,457	+				-1.2
1,245,457	+				-0.5
1,245,457	+				+0.1
1,245,457	+				+0.3
1,245,457	+				-0.7
1,245,457	+				-0.5
1,245,457	+				+0.5
1,245,457	+				-1.2
1,245,457	+				-1.0
1,245,458	-				-1.9
1,245,458	-				-0.2
1,245,458	-				-0.5
1,245,458	-				-1.0
1,245,458	-				-0.4
1,245,458	-				-0.8
1,245,458	-				+0.1
1,245,458	-				-0.5
1,245,458	-				-1.3
1,245,458	-				+1.2
1,245,458	-				-0.1
1,245,458	-				+0.6
1,245,458	-				+0.0
1,245,458	-				-0.8
1,245,458	-				-1.5
1,245,459	+				-1.4
1,245,459	+				-0.9
1,245,459	+				-2.0
1,245,459	+				-0.4
1,245,459	+				-1.0
1,245,459	+				+0.6
1,245,459	+				-0.8
1,245,460	-				+0.4
1,245,460	-				-1.0
1,245,460	-				-0.6
1,245,460	-				+1.4
1,245,460	-				-0.2
1,245,486	+				+0.5
1,245,487	-				+0.8
1,245,487	-				-0.8
1,245,487	-				+0.4
1,245,514	-				-0.8
1,245,514	-				-0.5
1,245,514	-				-0.4
1,245,532	+				+0.3
1,245,532	+				-0.2
1,245,532	+				+0.0
1,245,532	+				+0.5
1,245,532	+				+1.0
1,245,532	+				-1.0
1,245,532	+				+0.1
1,245,533	-				-1.5
1,245,533	-				-0.8
1,245,533	-				+0.8
1,245,533	-				-0.3
1,245,533	-				+0.3
1,245,533	-				+0.2
1,245,542	+				-0.1
1,245,542	+				-0.7
1,245,542	+				+0.6
1,245,542	+				-0.2
1,245,542	+				-1.7
1,245,542	+				-0.6
1,245,542	+				-0.3
1,245,542	+				-0.1
1,245,542	+				-0.8
1,245,542	+				+1.0
1,245,542	+				-0.3
1,245,542	+				+0.8
1,245,542	+				-0.6
1,245,542	+				-2.1
1,245,542	+				+1.2
1,245,542	+				-0.3
1,245,542	+				-1.2
1,245,542	+				-0.0
1,245,542	+				+0.2
1,245,542	+				-0.5
1,245,542	+				-1.4
1,245,542	+				-1.4
1,245,542	+				-0.5
1,245,542	+				-0.4
1,245,543	-				-0.5
1,245,543	-				-0.8
1,245,543	-				+0.8
1,245,543	-				-1.0
1,245,543	-				+2.2
1,245,543	-				-0.7
1,245,543	-				-1.0
1,245,543	-				-0.3
1,245,543	-				-2.0
1,245,543	-				-0.3
1,245,543	-				-0.7
1,245,543	-				+0.0
1,245,543	-				-1.5
1,245,543	-				-1.2
1,245,543	-				-0.8
1,245,543	-				-0.6
1,245,543	-				+2.0
1,245,543	-				+0.0
1,245,543	-				-1.2
1,245,543	-				+0.6
1,245,543	-				-0.4
1,245,562	+				+0.8
1,245,562	+				-0.2
1,245,562	+				-0.7
1,245,562	+				+0.7
1,245,563	-				-0.5
1,245,563	-				-0.6
1,245,563	-				-0.3
1,245,563	-				-0.8
1,245,649	-		MPMX19_01195	0.14	-0.1
1,245,649	-		MPMX19_01195	0.14	-0.2
1,245,757	+		MPMX19_01195	0.34	-0.8
1,245,757	+		MPMX19_01195	0.34	-0.8
1,245,758	-		MPMX19_01195	0.34	+1.3
1,245,758	-		MPMX19_01195	0.34	+0.1
1,245,758	-		MPMX19_01195	0.34	-1.2
1,245,811	+		MPMX19_01195	0.45	+0.4
1,245,811	+		MPMX19_01195	0.45	-0.7
1,245,812	-		MPMX19_01195	0.45	+0.4
1,245,812	-		MPMX19_01195	0.45	+0.4
1,245,812	-		MPMX19_01195	0.45	+0.0
1,245,812	-		MPMX19_01195	0.45	+1.0
1,245,812	-		MPMX19_01195	0.45	-1.8
1,246,000	+		MPMX19_01195	0.81	-0.0
1,246,000	+		MPMX19_01195	0.81	-0.6
1,246,000	+		MPMX19_01195	0.81	-1.8
1,246,000	+		MPMX19_01195	0.81	+0.4
1,246,000	+		MPMX19_01195	0.81	+0.8
1,246,000	+		MPMX19_01195	0.81	-0.2
1,246,000	+		MPMX19_01195	0.81	-2.1
1,246,000	+		MPMX19_01195	0.81	-2.4
1,246,000	+		MPMX19_01195	0.81	-0.3
1,246,001	-		MPMX19_01195	0.81	+0.4
1,246,001	-		MPMX19_01195	0.81	+0.0
1,246,001	-		MPMX19_01195	0.81	+1.0
1,246,001	-		MPMX19_01195	0.81	-0.1
1,246,001	-		MPMX19_01195	0.81	+1.4
1,246,001	-		MPMX19_01195	0.81	-1.0
1,246,001	-		MPMX19_01195	0.81	-1.7
1,246,001	-		MPMX19_01195	0.81	-0.4
1,246,001	-		MPMX19_01195	0.81	+1.2
1,246,001	-		MPMX19_01195	0.81	-0.9
1,246,001	-		MPMX19_01195	0.81	-0.6
1,246,001	-		MPMX19_01195	0.81	+0.6
1,246,033	+		MPMX19_01195	0.87	-0.1
1,246,033	+		MPMX19_01195	0.87	-1.1
1,246,033	+		MPMX19_01195	0.87	-0.7
1,246,033	+		MPMX19_01195	0.87	-0.3
1,246,033	+		MPMX19_01195	0.87	+0.0
1,246,033	+		MPMX19_01195	0.87	-0.2
1,246,034	-		MPMX19_01195	0.87	-0.8
1,246,034	-		MPMX19_01195	0.87	-0.7
1,246,034	-		MPMX19_01195	0.87	+0.9
1,246,034	-		MPMX19_01195	0.87	-0.1
1,246,034	-		MPMX19_01195	0.87	-0.2
1,246,034	-		MPMX19_01195	0.87	-0.8
1,246,034	-		MPMX19_01195	0.87	+1.2
1,246,034	-		MPMX19_01195	0.87	-1.8
1,246,042	+		MPMX19_01195	0.89	-0.4
1,246,043	-		MPMX19_01195	0.89	-0.9
1,246,043	-		MPMX19_01195	0.89	+0.2
1,246,043	-		MPMX19_01195	0.89	+0.9
1,246,045	+		MPMX19_01195	0.89	+0.2
1,246,045	+		MPMX19_01195	0.89	-1.7
1,246,045	+		MPMX19_01195	0.89	-1.4
1,246,045	+		MPMX19_01195	0.89	-0.9
1,246,045	+		MPMX19_01195	0.89	+1.0
1,246,045	+		MPMX19_01195	0.89	+0.2
1,246,046	-		MPMX19_01195	0.89	-0.5
1,246,046	-		MPMX19_01195	0.89	-0.1
1,246,046	-		MPMX19_01195	0.89	-0.1
1,246,046	-		MPMX19_01195	0.89	-0.6
1,246,046	-		MPMX19_01195	0.89	+0.2
1,246,046	-		MPMX19_01195	0.89	-0.2
1,246,046	-		MPMX19_01195	0.89	-1.1
1,246,046	-		MPMX19_01195	0.89	-0.6
1,246,046	-		MPMX19_01195	0.89	-1.0
1,246,046	-		MPMX19_01195	0.89	-1.2
1,246,112	+				+0.0
1,246,112	+				+0.2
1,246,113	-				+0.6
1,246,113	-				-1.1
1,246,113	-				+0.3
1,246,113	-				-0.4
1,246,141	+				+0.4
1,246,141	+				-0.4
1,246,141	+				+0.9
1,246,142	-				+0.2
1,246,142	-				+0.8
1,246,242	+		MPMX19_01196	0.25	-1.0
1,246,242	+		MPMX19_01196	0.25	+0.1
1,246,242	+		MPMX19_01196	0.25	+0.2
1,246,242	+		MPMX19_01196	0.25	+1.4
1,246,242	+		MPMX19_01196	0.25	+0.5
1,246,243	-		MPMX19_01196	0.25	+0.4
1,246,243	-		MPMX19_01196	0.25	+0.7
1,246,243	-		MPMX19_01196	0.25	-0.2
1,246,540	+				-1.4
1,246,540	+				-2.7
1,246,540	+				+0.3
1,246,540	+				-1.2
1,246,540	+				-0.9
1,246,540	+				-0.6
1,246,540	+				-0.5
1,246,540	+				+0.1
1,246,540	+				+0.0
1,246,540	+				-0.1
1,246,540	+				+0.4
1,246,540	+				-0.1
1,246,540	+				-0.5
1,246,540	+				+0.2
1,246,540	+				-1.2
1,246,540	+				+0.0
1,246,540	+				+0.3
1,246,540	+				+0.1
1,246,540	+				-1.7
1,246,540	+				-2.5
1,246,540	+				-0.7
1,246,540	+				-0.0
1,246,540	+				+1.5
1,246,540	+				+0.2
1,246,540	+				-0.0
1,246,540	+				-1.0
1,246,540	+				-1.4
1,246,540	+				+0.3
1,246,540	+				-0.5
1,246,540	+				-1.9
1,246,541	-				+1.0
1,246,541	-				-1.2
1,246,541	-				-0.5
1,246,541	-				+0.5
1,246,541	-				+1.0
1,246,541	-				+0.8
1,246,541	-				-2.5
1,246,541	-				-0.3
1,246,541	-				-0.2
1,246,541	-				-0.4
1,246,541	-				+0.1
1,246,541	-				+0.3
1,246,541	-				-0.7
1,246,541	-				+0.6
1,246,541	-				-0.1
1,246,541	-				+0.0
1,246,541	-				+0.2
1,246,541	-				-1.4
1,246,541	-				-0.8
1,246,541	-				-0.1
1,246,541	-				-0.4
1,246,541	-				-2.5
1,246,541	-				-2.4
1,246,541	-				-0.2
1,246,541	-				-0.5
1,246,541	-				-0.3
1,246,574	+				-1.1
1,246,574	+				-1.8
1,246,574	+				-0.8
1,246,574	+				-0.8
1,246,574	+				-1.7
1,246,574	+				+0.2
1,246,575	-				-0.8
1,246,575	-				-3.1
1,246,575	-				-0.2
1,246,575	-				-1.7
1,246,575	-				-0.7
1,246,575	-				+0.0
1,246,575	-				+0.1
1,246,622	+		MPMX19_01197	0.11	+0.3
1,246,622	+		MPMX19_01197	0.11	-0.5
1,246,622	+		MPMX19_01197	0.11	-0.4
1,246,622	+		MPMX19_01197	0.11	+0.1
1,246,623	-		MPMX19_01197	0.12	-1.3
1,246,623	-		MPMX19_01197	0.12	+0.0
1,246,726	+		MPMX19_01197	0.33	+0.1
1,246,726	+		MPMX19_01197	0.33	+0.6
1,246,726	+		MPMX19_01197	0.33	+1.5
1,246,726	+		MPMX19_01197	0.33	-0.4
1,246,727	-		MPMX19_01197	0.34	-0.7
1,246,727	-		MPMX19_01197	0.34	-2.1
1,246,727	-		MPMX19_01197	0.34	-0.2
1,246,727	-		MPMX19_01197	0.34	-0.6
1,246,727	-		MPMX19_01197	0.34	-1.3
1,246,727	-		MPMX19_01197	0.34	-0.6
1,246,944	-		MPMX19_01197	0.79	+0.6
1,247,069	+				-0.9
1,247,069	+				-0.3
1,247,069	+				-0.7
1,247,069	+				+1.1
1,247,069	+				-0.2
1,247,069	+				-0.8
1,247,069	+				-0.3
1,247,069	+				-1.9
1,247,070	-				-1.1
1,247,070	-				+0.5
1,247,070	-				+0.4
1,247,070	-				+1.2
1,247,070	-				+0.4