Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01126

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NL-CCM; ambient oxygen
				remove
1,158,423	+	MPMX19_01123	0.88	+0.5
1,158,423	+	MPMX19_01123	0.88	-1.4
1,158,423	+	MPMX19_01123	0.88	-0.3
1,158,423	+	MPMX19_01123	0.88	-0.9
1,158,424	-	MPMX19_01123	0.89	+0.3
1,158,424	-	MPMX19_01123	0.89	-0.0
1,158,500	+			-0.8
1,158,500	+			-0.4
1,158,500	+			-0.3
1,158,500	+			-0.2
1,158,501	-			-0.4
1,158,501	-			-0.6
1,158,501	-			-0.1
1,158,501	-			-2.6
1,158,652	-	MPMX19_01124	0.20	+0.3
1,159,010	+	MPMX19_01124	0.69	-0.3
1,159,010	+	MPMX19_01124	0.69	-1.6
1,159,010	+	MPMX19_01124	0.69	+0.8
1,159,010	+	MPMX19_01124	0.69	-0.4
1,159,010	+	MPMX19_01124	0.69	-0.7
1,159,010	+	MPMX19_01124	0.69	+0.1
1,159,010	+	MPMX19_01124	0.69	-1.0
1,159,010	+	MPMX19_01124	0.69	+0.7
1,159,010	+	MPMX19_01124	0.69	-1.0
1,159,010	+	MPMX19_01124	0.69	-1.6
1,159,010	+	MPMX19_01124	0.69	+0.8
1,159,010	+	MPMX19_01124	0.69	-1.4
1,159,010	+	MPMX19_01124	0.69	-0.1
1,159,010	+	MPMX19_01124	0.69	+0.8
1,159,010	+	MPMX19_01124	0.69	-1.6
1,159,010	+	MPMX19_01124	0.69	+0.7
1,159,010	+	MPMX19_01124	0.69	-0.9
1,159,010	+	MPMX19_01124	0.69	+1.0
1,159,011	-	MPMX19_01124	0.69	-0.5
1,159,011	-	MPMX19_01124	0.69	-1.6
1,159,011	-	MPMX19_01124	0.69	-0.9
1,159,011	-	MPMX19_01124	0.69	-1.3
1,159,011	-	MPMX19_01124	0.69	+0.4
1,159,011	-	MPMX19_01124	0.69	-0.3
1,159,011	-	MPMX19_01124	0.69	-1.7
1,159,011	-	MPMX19_01124	0.69	+0.9
1,159,011	-	MPMX19_01124	0.69	+1.0
1,159,011	-	MPMX19_01124	0.69	-0.2
1,159,011	-	MPMX19_01124	0.69	-0.2
1,159,011	-	MPMX19_01124	0.69	-1.0
1,159,011	-	MPMX19_01124	0.69	-0.1
1,159,011	-	MPMX19_01124	0.69	+0.2
1,159,011	-	MPMX19_01124	0.69	-0.8
1,159,196	+			+1.0
1,159,196	+			+0.4
1,159,196	+			-0.6
1,159,196	+			-0.6
1,159,196	+			-2.2
1,159,196	+			-1.4
1,159,196	+			-0.2
1,159,196	+			+0.6
1,159,197	-			-0.7
1,159,197	-			+0.3
1,159,197	-			+1.4
1,159,197	-			-0.4
1,159,197	-			+0.8
1,159,197	-			-0.6
1,159,197	-			-0.8
1,159,197	-			-0.6
1,159,197	-			+0.9
1,159,197	-			-0.5
1,159,309	+	MPMX19_01125	0.40	+0.7
1,159,309	+	MPMX19_01125	0.40	-0.6
1,159,310	-	MPMX19_01125	0.41	-0.1
1,159,310	-	MPMX19_01125	0.41	+0.8
1,159,400	+			-0.4
1,159,400	+			-0.2
1,159,400	+			-0.5
1,159,401	-			-1.1
1,159,401	-			-1.1
1,159,402	+			-0.7
1,159,402	+			-1.6
1,159,402	+			-0.2
1,159,402	+			-0.4
1,159,403	-			-1.8
1,159,403	-			-0.8
1,159,403	-			-0.9
1,159,403	-			+1.8
1,159,403	-			-0.6
1,159,403	-			-1.2
1,159,491	+			-0.0
1,159,491	+			+0.4
1,159,491	+			-0.5
1,159,491	+			-0.6
1,159,491	+			+0.2
1,159,492	-			-0.7
1,159,492	-			-0.6
1,159,492	-			-1.1
1,159,492	-			+0.4
1,159,492	-			-0.0
1,159,492	-			-0.8
1,159,569	-	MPMX19_01126	0.12	-1.3
1,159,569	-	MPMX19_01126	0.12	+0.2
1,159,583	+	MPMX19_01126	0.13	-0.9
1,159,583	+	MPMX19_01126	0.13	-1.4
1,159,584	-	MPMX19_01126	0.14	-0.0
1,159,584	-	MPMX19_01126	0.14	-1.2
1,159,584	-	MPMX19_01126	0.14	-0.2
1,159,584	-	MPMX19_01126	0.14	+0.5
1,159,584	-	MPMX19_01126	0.14	+1.2
1,159,584	-	MPMX19_01126	0.14	-1.3
1,159,584	-	MPMX19_01126	0.14	+0.4
1,159,584	-	MPMX19_01126	0.14	-0.8
1,159,584	-	MPMX19_01126	0.14	-0.5
1,159,584	-	MPMX19_01126	0.14	-2.4
1,159,670	+	MPMX19_01126	0.21	-0.4
1,159,670	+	MPMX19_01126	0.21	+0.2
1,159,670	+	MPMX19_01126	0.21	-0.4
1,159,670	+	MPMX19_01126	0.21	-0.6
1,159,670	+	MPMX19_01126	0.21	-1.0
1,159,670	+	MPMX19_01126	0.21	+0.1
1,159,670	+	MPMX19_01126	0.21	-0.7
1,159,671	-	MPMX19_01126	0.21	-0.2
1,159,671	-	MPMX19_01126	0.21	+0.2
1,159,671	-	MPMX19_01126	0.21	+1.1
1,159,671	-	MPMX19_01126	0.21	+0.4
1,159,671	-	MPMX19_01126	0.21	+0.2
1,159,671	-	MPMX19_01126	0.21	+0.3
1,159,671	-	MPMX19_01126	0.21	-0.6
1,159,671	-	MPMX19_01126	0.21	+1.8
1,159,718	-	MPMX19_01126	0.25	+0.1
1,159,718	-	MPMX19_01126	0.25	-0.7
1,159,727	+	MPMX19_01126	0.25	-1.4
1,159,727	+	MPMX19_01126	0.25	-0.6
1,159,727	+	MPMX19_01126	0.25	+0.0
1,159,727	+	MPMX19_01126	0.25	-1.0
1,159,727	+	MPMX19_01126	0.25	-1.8
1,159,727	+	MPMX19_01126	0.25	-0.1
1,159,727	+	MPMX19_01126	0.25	-0.1
1,159,727	+	MPMX19_01126	0.25	-1.6
1,159,727	+	MPMX19_01126	0.25	+0.8
1,159,727	+	MPMX19_01126	0.25	-0.5
1,159,728	-	MPMX19_01126	0.25	-1.6
1,159,728	-	MPMX19_01126	0.25	-1.0
1,159,728	-	MPMX19_01126	0.25	-0.8
1,159,728	-	MPMX19_01126	0.25	-1.0
1,159,728	-	MPMX19_01126	0.25	-0.6
1,159,728	-	MPMX19_01126	0.25	-1.7
1,159,728	-	MPMX19_01126	0.25	+0.4
1,159,728	-	MPMX19_01126	0.25	-0.2
1,159,728	-	MPMX19_01126	0.25	-0.2
1,159,728	-	MPMX19_01126	0.25	+0.1
1,159,728	-	MPMX19_01126	0.25	-0.4
1,159,728	-	MPMX19_01126	0.25	+0.0
1,159,728	-	MPMX19_01126	0.25	+0.1
1,159,832	+	MPMX19_01126	0.34	+1.0
1,159,832	+	MPMX19_01126	0.34	-0.2
1,159,832	+	MPMX19_01126	0.34	+0.8
1,159,832	+	MPMX19_01126	0.34	+0.1
1,159,832	+	MPMX19_01126	0.34	-0.0
1,159,832	+	MPMX19_01126	0.34	-0.9
1,159,833	-	MPMX19_01126	0.34	-0.0
1,159,833	-	MPMX19_01126	0.34	-1.2
1,159,833	-	MPMX19_01126	0.34	-0.0
1,159,833	-	MPMX19_01126	0.34	-1.7
1,159,833	-	MPMX19_01126	0.34	+0.5
1,159,833	-	MPMX19_01126	0.34	-1.0
1,159,833	-	MPMX19_01126	0.34	-0.2
1,159,833	-	MPMX19_01126	0.34	+0.5
1,159,833	-	MPMX19_01126	0.34	-1.4
1,159,849	+	MPMX19_01126	0.35	-0.7
1,159,849	+	MPMX19_01126	0.35	-0.8
1,159,849	+	MPMX19_01126	0.35	-0.3
1,159,849	+	MPMX19_01126	0.35	-1.1
1,159,849	+	MPMX19_01126	0.35	-1.4
1,159,850	-	MPMX19_01126	0.35	+0.0
1,159,850	-	MPMX19_01126	0.35	-0.1
1,159,850	-	MPMX19_01126	0.35	-1.9
1,159,850	-	MPMX19_01126	0.35	-0.3
1,159,850	-	MPMX19_01126	0.35	-0.8
1,159,910	+	MPMX19_01126	0.40	-0.4
1,159,910	+	MPMX19_01126	0.40	-1.6
1,159,910	+	MPMX19_01126	0.40	-0.6
1,159,910	+	MPMX19_01126	0.40	+0.3
1,159,911	-	MPMX19_01126	0.40	-0.9
1,159,911	-	MPMX19_01126	0.40	-1.6
1,159,911	-	MPMX19_01126	0.40	+0.3
1,159,911	-	MPMX19_01126	0.40	-0.5
1,159,911	-	MPMX19_01126	0.40	-0.8
1,159,911	-	MPMX19_01126	0.40	-0.2
1,159,911	-	MPMX19_01126	0.40	+0.2
1,159,967	+	MPMX19_01126	0.45	-1.5
1,159,967	+	MPMX19_01126	0.45	-1.0
1,159,967	+	MPMX19_01126	0.45	+0.3
1,159,968	-	MPMX19_01126	0.45	-0.8
1,160,030	+	MPMX19_01126	0.50	+0.3
1,160,030	+	MPMX19_01126	0.50	-0.7
1,160,030	+	MPMX19_01126	0.50	-2.1
1,160,030	+	MPMX19_01126	0.50	-0.2
1,160,030	+	MPMX19_01126	0.50	-0.0
1,160,030	+	MPMX19_01126	0.50	+1.2
1,160,030	+	MPMX19_01126	0.50	+0.2
1,160,030	+	MPMX19_01126	0.50	-1.0
1,160,030	+	MPMX19_01126	0.50	+0.0
1,160,030	+	MPMX19_01126	0.50	+0.9
1,160,030	+	MPMX19_01126	0.50	+0.3
1,160,030	+	MPMX19_01126	0.50	+0.2
1,160,030	+	MPMX19_01126	0.50	-0.1
1,160,030	+	MPMX19_01126	0.50	-0.8
1,160,030	+	MPMX19_01126	0.50	-1.0
1,160,030	+	MPMX19_01126	0.50	-0.9
1,160,030	+	MPMX19_01126	0.50	-0.6
1,160,030	+	MPMX19_01126	0.50	-0.6
1,160,030	+	MPMX19_01126	0.50	+1.3
1,160,030	+	MPMX19_01126	0.50	+0.2
1,160,030	+	MPMX19_01126	0.50	-1.6
1,160,030	+	MPMX19_01126	0.50	+1.2
1,160,030	+	MPMX19_01126	0.50	+0.8
1,160,030	+	MPMX19_01126	0.50	+0.0
1,160,030	+	MPMX19_01126	0.50	+1.5
1,160,031	-	MPMX19_01126	0.50	-0.1
1,160,031	-	MPMX19_01126	0.50	+0.0
1,160,031	-	MPMX19_01126	0.50	+0.8
1,160,031	-	MPMX19_01126	0.50	+0.3
1,160,031	-	MPMX19_01126	0.50	-0.6
1,160,031	-	MPMX19_01126	0.50	+0.4
1,160,031	-	MPMX19_01126	0.50	-1.8
1,160,031	-	MPMX19_01126	0.50	-0.8
1,160,031	-	MPMX19_01126	0.50	+0.2
1,160,031	-	MPMX19_01126	0.50	-0.2
1,160,031	-	MPMX19_01126	0.50	-0.2
1,160,031	-	MPMX19_01126	0.50	-0.1
1,160,031	-	MPMX19_01126	0.50	-1.4
1,160,031	-	MPMX19_01126	0.50	-0.3
1,160,031	-	MPMX19_01126	0.50	-2.2
1,160,031	-	MPMX19_01126	0.50	-1.1
1,160,031	-	MPMX19_01126	0.50	-1.7
1,160,031	-	MPMX19_01126	0.50	-1.4
1,160,031	-	MPMX19_01126	0.50	+0.2
1,160,031	-	MPMX19_01126	0.50	-0.6
1,160,031	-	MPMX19_01126	0.50	-0.2
1,160,031	-	MPMX19_01126	0.50	+0.4
1,160,031	-	MPMX19_01126	0.50	-0.2
1,160,132	+	MPMX19_01126	0.58	-0.2
1,160,132	+	MPMX19_01126	0.58	-1.4
1,160,132	+	MPMX19_01126	0.58	-0.4
1,160,132	+	MPMX19_01126	0.58	-0.3
1,160,132	+	MPMX19_01126	0.58	-1.0
1,160,132	+	MPMX19_01126	0.58	+0.8
1,160,132	+	MPMX19_01126	0.58	-0.8
1,160,133	-	MPMX19_01126	0.58	-0.4
1,160,133	-	MPMX19_01126	0.58	+1.8
1,160,133	-	MPMX19_01126	0.58	+0.8
1,160,133	-	MPMX19_01126	0.58	-1.0
1,160,133	-	MPMX19_01126	0.58	-1.5
1,160,133	-	MPMX19_01126	0.58	-0.7
1,160,408	+	MPMX19_01126	0.81	-0.1
1,160,408	+	MPMX19_01126	0.81	-0.0
1,160,408	+	MPMX19_01126	0.81	-2.4
1,160,408	+	MPMX19_01126	0.81	-0.4
1,160,408	+	MPMX19_01126	0.81	-0.9
1,160,409	-	MPMX19_01126	0.81	-0.2
1,160,409	-	MPMX19_01126	0.81	+0.7
1,160,409	-	MPMX19_01126	0.81	-0.3
1,160,409	-	MPMX19_01126	0.81	-0.6
1,160,409	-	MPMX19_01126	0.81	+0.9
1,160,410	+	MPMX19_01126	0.81	-0.8
1,160,410	+	MPMX19_01126	0.81	-1.5
1,160,410	+	MPMX19_01126	0.81	-0.1
1,160,410	+	MPMX19_01126	0.81	-0.3
1,160,410	+	MPMX19_01126	0.81	-0.4
1,160,410	+	MPMX19_01126	0.81	+0.8
1,160,410	+	MPMX19_01126	0.81	+1.8
1,160,410	+	MPMX19_01126	0.81	+0.9
1,160,410	+	MPMX19_01126	0.81	-1.4
1,160,410	+	MPMX19_01126	0.81	+0.8
1,160,410	+	MPMX19_01126	0.81	-0.9
1,160,410	+	MPMX19_01126	0.81	+1.2
1,160,410	+	MPMX19_01126	0.81	-1.8
1,160,410	+	MPMX19_01126	0.81	-1.0
1,160,410	+	MPMX19_01126	0.81	+0.4
1,160,411	-	MPMX19_01126	0.81	+1.0
1,160,411	-	MPMX19_01126	0.81	+0.2
1,160,411	-	MPMX19_01126	0.81	-0.9
1,160,411	-	MPMX19_01126	0.81	+1.2
1,160,411	-	MPMX19_01126	0.81	+0.6
1,160,411	-	MPMX19_01126	0.81	-0.4
1,160,411	-	MPMX19_01126	0.81	-0.2
1,160,411	-	MPMX19_01126	0.81	+0.2
1,160,411	-	MPMX19_01126	0.81	-0.6
1,160,411	-	MPMX19_01126	0.81	+0.3
1,160,411	-	MPMX19_01126	0.81	-0.6
1,160,411	-	MPMX19_01126	0.81	-0.9
1,160,818	+			-0.2
1,160,819	-			-1.0
1,160,975	+	MPMX19_01127	0.23	-0.2
1,160,975	+	MPMX19_01127	0.23	-0.5
1,160,975	+	MPMX19_01127	0.23	-1.7
1,160,975	+	MPMX19_01127	0.23	-0.3
1,160,975	+	MPMX19_01127	0.23	-1.4
1,160,975	+	MPMX19_01127	0.23	-0.5
1,160,975	+	MPMX19_01127	0.23	+0.8
1,160,975	+	MPMX19_01127	0.23	+1.2
1,160,975	+	MPMX19_01127	0.23	+0.6
1,160,975	+	MPMX19_01127	0.23	-0.4
1,160,975	+	MPMX19_01127	0.23	+0.2
1,160,975	+	MPMX19_01127	0.23	-0.4
1,160,975	+	MPMX19_01127	0.23	-0.7
1,160,975	+	MPMX19_01127	0.23	-0.7
1,160,975	+	MPMX19_01127	0.23	+0.5
1,160,975	+	MPMX19_01127	0.23	+1.2
1,160,975	+	MPMX19_01127	0.23	-0.6
1,160,975	+	MPMX19_01127	0.23	+0.6
1,160,975	+	MPMX19_01127	0.23	-1.0
1,160,975	+	MPMX19_01127	0.23	-0.4
1,160,975	+	MPMX19_01127	0.23	+0.5
1,160,975	+	MPMX19_01127	0.23	-1.2
1,160,975	+	MPMX19_01127	0.23	-1.0
1,160,976	-	MPMX19_01127	0.23	-1.1
1,160,976	-	MPMX19_01127	0.23	+0.0
1,160,976	-	MPMX19_01127	0.23	-1.6
1,160,976	-	MPMX19_01127	0.23	+0.6
1,160,976	-	MPMX19_01127	0.23	+0.2
1,160,976	-	MPMX19_01127	0.23	-0.6
1,160,976	-	MPMX19_01127	0.23	-0.4
1,160,976	-	MPMX19_01127	0.23	-1.2
1,160,976	-	MPMX19_01127	0.23	-0.1
1,160,976	-	MPMX19_01127	0.23	-0.1
1,160,976	-	MPMX19_01127	0.23	-2.0
1,160,976	-	MPMX19_01127	0.23	+0.2
1,160,976	-	MPMX19_01127	0.23	-0.8
1,160,976	-	MPMX19_01127	0.23	-0.2
1,160,976	-	MPMX19_01127	0.23	+1.8
1,160,976	-	MPMX19_01127	0.23	-0.0
1,160,976	-	MPMX19_01127	0.23	+0.3
1,160,976	-	MPMX19_01127	0.23	-0.8
1,160,976	-	MPMX19_01127	0.23	-0.8
1,160,976	-	MPMX19_01127	0.23	-0.8
1,160,976	-	MPMX19_01127	0.23	-1.8
1,160,976	-	MPMX19_01127	0.23	+0.4
1,160,976	-	MPMX19_01127	0.23	+0.4
1,160,976	-	MPMX19_01127	0.23	-0.4
1,160,976	-	MPMX19_01127	0.23	+0.5

Or see this region's nucleotide sequence