Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06608

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
109,892	+		MPMX19_06607	0.41	-0.0
109,892	+		MPMX19_06607	0.41	+1.0
109,892	+		MPMX19_06607	0.41	-0.1
109,892	+		MPMX19_06607	0.41	+0.2
109,892	+		MPMX19_06607	0.41	-0.7
109,892	+		MPMX19_06607	0.41	-1.7
109,892	+		MPMX19_06607	0.41	-0.2
109,892	+		MPMX19_06607	0.41	+1.1
109,892	+		MPMX19_06607	0.41	+0.4
109,892	+		MPMX19_06607	0.41	-0.2
109,892	+		MPMX19_06607	0.41	+0.3
109,892	+		MPMX19_06607	0.41	-1.0
109,892	+		MPMX19_06607	0.41	-0.4
109,892	+		MPMX19_06607	0.41	-1.4
109,892	+		MPMX19_06607	0.41	-0.1
109,893	-		MPMX19_06607	0.41	-0.4
109,893	-		MPMX19_06607	0.41	-0.4
109,893	-		MPMX19_06607	0.41	-0.5
109,893	-		MPMX19_06607	0.41	+0.4
109,893	-		MPMX19_06607	0.41	-0.4
109,893	-		MPMX19_06607	0.41	+0.4
109,893	-		MPMX19_06607	0.41	+0.1
109,893	-		MPMX19_06607	0.41	+0.5
109,893	-		MPMX19_06607	0.41	+0.1
109,893	-		MPMX19_06607	0.41	+0.6
109,893	-		MPMX19_06607	0.41	+0.3
109,893	-		MPMX19_06607	0.41	+0.0
109,893	-		MPMX19_06607	0.41	-0.1
109,893	-		MPMX19_06607	0.41	+0.2
109,893	-		MPMX19_06607	0.41	-0.6
109,893	-		MPMX19_06607	0.41	-0.6
109,893	-		MPMX19_06607	0.41	+0.0
109,893	-		MPMX19_06607	0.41	-2.6
109,893	-		MPMX19_06607	0.41	-0.3
109,893	-		MPMX19_06607	0.41	+0.2
109,893	-		MPMX19_06607	0.41	-0.6
109,893	-		MPMX19_06607	0.41	-0.0
109,991	+		MPMX19_06607	0.49	-0.5
109,991	+		MPMX19_06607	0.49	+0.1
109,991	+		MPMX19_06607	0.49	-0.3
109,991	+		MPMX19_06607	0.49	+0.0
109,991	+		MPMX19_06607	0.49	-0.4
109,992	-		MPMX19_06607	0.49	+0.2
109,992	-		MPMX19_06607	0.49	-1.4
110,021	+		MPMX19_06607	0.52	-0.0
110,021	+		MPMX19_06607	0.52	+0.2
110,021	+		MPMX19_06607	0.52	-0.9
110,021	+		MPMX19_06607	0.52	+0.1
110,021	+		MPMX19_06607	0.52	-0.1
110,021	+		MPMX19_06607	0.52	+0.1
110,021	+		MPMX19_06607	0.52	-0.2
110,021	+		MPMX19_06607	0.52	+0.1
110,022	-		MPMX19_06607	0.52	-0.6
110,022	-		MPMX19_06607	0.52	-2.5
110,022	-		MPMX19_06607	0.52	-1.7
110,022	-		MPMX19_06607	0.52	-0.2
110,022	-		MPMX19_06607	0.52	-0.9
110,027	+		MPMX19_06607	0.52	+0.0
110,027	+		MPMX19_06607	0.52	-0.9
110,028	-		MPMX19_06607	0.52	-1.0
110,028	-		MPMX19_06607	0.52	-1.9
110,028	-		MPMX19_06607	0.52	+1.1
110,120	+		MPMX19_06607	0.60	-1.1
110,120	+		MPMX19_06607	0.60	-1.9
110,120	+		MPMX19_06607	0.60	-0.6
110,121	-		MPMX19_06607	0.60	-1.8
110,121	-		MPMX19_06607	0.60	+1.4
110,121	-		MPMX19_06607	0.60	-0.9
110,121	-		MPMX19_06607	0.60	-2.0
110,121	-		MPMX19_06607	0.60	-1.7
110,132	+		MPMX19_06607	0.61	-0.2
110,132	+		MPMX19_06607	0.61	+0.6
110,132	+		MPMX19_06607	0.61	-0.4
110,132	+		MPMX19_06607	0.61	+0.1
110,132	+		MPMX19_06607	0.61	+0.8
110,132	+		MPMX19_06607	0.61	-1.7
110,132	+		MPMX19_06607	0.61	+0.0
110,132	+		MPMX19_06607	0.61	+0.5
110,132	+		MPMX19_06607	0.61	+0.4
110,132	+		MPMX19_06607	0.61	+0.3
110,132	+		MPMX19_06607	0.61	+0.3
110,132	+		MPMX19_06607	0.61	-0.4
110,132	+		MPMX19_06607	0.61	-2.5
110,133	-		MPMX19_06607	0.61	-0.3
110,133	-		MPMX19_06607	0.61	-0.0
110,133	-		MPMX19_06607	0.61	-0.3
110,133	-		MPMX19_06607	0.61	-0.1
110,133	-		MPMX19_06607	0.61	-0.6
110,133	-		MPMX19_06607	0.61	+0.3
110,336	+		MPMX19_06607	0.77	+0.1
110,336	+		MPMX19_06607	0.77	-2.2
110,336	+		MPMX19_06607	0.77	-0.2
110,336	+		MPMX19_06607	0.77	+0.0
110,336	+		MPMX19_06607	0.77	-2.2
110,336	+		MPMX19_06607	0.77	-0.4
110,337	-		MPMX19_06607	0.77	-2.0
110,337	-		MPMX19_06607	0.77	+0.5
110,337	-		MPMX19_06607	0.77	-0.3
110,395	-		MPMX19_06607	0.82	-1.2
110,438	+		MPMX19_06607	0.85	-1.1
110,438	+		MPMX19_06607	0.85	-0.9
110,438	+		MPMX19_06607	0.85	-0.6
110,438	+		MPMX19_06607	0.85	-0.6
110,438	+		MPMX19_06607	0.85	-0.9
110,438	+		MPMX19_06607	0.85	+0.2
110,438	+		MPMX19_06607	0.85	-0.3
110,438	+		MPMX19_06607	0.85	-0.4
110,439	-		MPMX19_06607	0.85	-0.7
110,439	-		MPMX19_06607	0.85	-0.3
110,439	-		MPMX19_06607	0.85	+0.9
110,439	-		MPMX19_06607	0.85	+0.4
110,439	-		MPMX19_06607	0.85	+0.0
110,439	-		MPMX19_06607	0.85	+0.0
110,439	-		MPMX19_06607	0.85	-0.2
110,439	-		MPMX19_06607	0.85	-0.7
110,483	+		MPMX19_06607	0.89	+0.6
110,483	+		MPMX19_06607	0.89	+1.6
110,484	-		MPMX19_06607	0.89	-0.9
110,484	-		MPMX19_06607	0.89	-0.6
110,540	+				-0.1
110,540	+				-0.4
110,540	+				+0.3
110,541	-				-0.1
110,541	-				-0.2
110,541	-				+0.0
110,680	+				-0.1
110,680	+				+0.2
110,680	+				-2.5
110,680	+				-0.7
110,680	+				+0.8
110,680	+				-1.4
110,680	+				+0.7
110,680	+				+0.6
110,680	+				+0.2
110,680	+				-0.1
110,680	+				-0.6
110,680	+				+0.0
110,680	+				-0.4
110,681	-				-1.1
110,681	-				-1.0
110,681	-				-0.7
110,681	-				-0.7
110,681	-				+0.3
110,681	-				+0.3
110,681	-				+0.8
110,681	-				-0.9
110,681	-				-1.2
110,684	+				+0.1
110,684	+				+0.1
110,684	+				-0.8
110,685	-				+0.5
110,685	-				-1.6
110,685	-				-0.2
110,685	-				-1.9
110,685	-				-1.2
110,685	-				+1.3
110,757	+				+0.4
110,757	+				-0.7
110,757	+				-1.2
110,757	+				-1.2
110,757	+				-0.6
110,757	+				-1.2
110,757	+				-0.9
110,757	+				+0.2
110,757	+				-0.6
110,757	+				-1.1
110,757	+				+0.4
110,758	-				+0.6
110,758	-				+0.4
110,758	-				-0.6
110,758	-				+0.0
110,758	-				-0.3
110,758	-				+0.1
110,758	-				-0.4
110,790	+				+0.6
110,790	+				-0.7
110,790	+				-0.3
110,790	+				-1.9
110,790	+				-1.9
110,791	-				+0.1
110,791	-				-0.9
110,791	-				-0.1
110,791	-				+0.0
110,791	-				-1.0
110,791	-				-0.4
110,791	-				+0.5
110,791	-				-0.0
110,967	+		MPMX19_06608	0.17	+0.1
110,967	+		MPMX19_06608	0.17	-1.0
110,967	+		MPMX19_06608	0.17	+0.0
110,967	+		MPMX19_06608	0.17	+0.4
110,967	+		MPMX19_06608	0.17	-0.2
110,967	+		MPMX19_06608	0.17	-0.5
110,967	+		MPMX19_06608	0.17	-0.6
110,967	+		MPMX19_06608	0.17	-0.5
110,967	+		MPMX19_06608	0.17	+0.0
110,967	+		MPMX19_06608	0.17	+0.0
110,968	-		MPMX19_06608	0.17	+0.0
110,968	-		MPMX19_06608	0.17	+0.1
110,968	-		MPMX19_06608	0.17	-0.5
110,968	-		MPMX19_06608	0.17	+0.2
110,968	-		MPMX19_06608	0.17	-0.3
110,968	-		MPMX19_06608	0.17	+0.3
110,968	-		MPMX19_06608	0.17	-0.6
110,968	-		MPMX19_06608	0.17	+1.0
110,968	-		MPMX19_06608	0.17	-0.5
110,968	-		MPMX19_06608	0.17	+0.6
110,968	-		MPMX19_06608	0.17	+0.8
110,968	-		MPMX19_06608	0.17	-0.7
110,968	-		MPMX19_06608	0.17	+0.4
110,968	-		MPMX19_06608	0.17	-0.4
110,968	-		MPMX19_06608	0.17	-1.3
110,968	-		MPMX19_06608	0.17	+0.0
111,021	+		MPMX19_06608	0.21	+1.6
111,021	+		MPMX19_06608	0.21	+0.2
111,021	+		MPMX19_06608	0.21	+1.1
111,021	+		MPMX19_06608	0.21	+0.2
111,021	+		MPMX19_06608	0.21	-1.4
111,022	-		MPMX19_06608	0.21	+0.3
111,022	-		MPMX19_06608	0.21	+0.6
111,022	-		MPMX19_06608	0.21	+0.1
111,022	-		MPMX19_06608	0.21	-2.0
111,046	-		MPMX19_06608	0.22	-0.2
111,046	-		MPMX19_06608	0.22	-0.8
111,046	-		MPMX19_06608	0.22	+1.5
111,046	-		MPMX19_06608	0.22	-1.5
111,046	-		MPMX19_06608	0.22	-1.1
111,046	-		MPMX19_06608	0.22	-0.5
111,063	+		MPMX19_06608	0.24	+0.5
111,063	+		MPMX19_06608	0.24	-1.1
111,063	+		MPMX19_06608	0.24	-0.8
111,063	+		MPMX19_06608	0.24	-0.5
111,064	-		MPMX19_06608	0.24	+0.9
111,064	-		MPMX19_06608	0.24	+0.1
111,064	-		MPMX19_06608	0.24	-1.6
111,064	-		MPMX19_06608	0.24	+0.5
111,064	-		MPMX19_06608	0.24	+1.1
111,064	-		MPMX19_06608	0.24	-1.2
111,064	-		MPMX19_06608	0.24	-0.4
111,237	+		MPMX19_06608	0.37	+0.3
111,237	+		MPMX19_06608	0.37	+0.9
111,237	+		MPMX19_06608	0.37	-0.1
111,237	+		MPMX19_06608	0.37	-1.0
111,237	+		MPMX19_06608	0.37	-0.8
111,237	+		MPMX19_06608	0.37	-0.5
111,237	+		MPMX19_06608	0.37	-1.9
111,237	+		MPMX19_06608	0.37	+1.0
111,237	+		MPMX19_06608	0.37	-0.4
111,237	+		MPMX19_06608	0.37	-0.2
111,237	+		MPMX19_06608	0.37	-0.9
111,238	-		MPMX19_06608	0.37	-0.1
111,238	-		MPMX19_06608	0.37	-1.9
111,238	-		MPMX19_06608	0.37	+1.6
111,238	-		MPMX19_06608	0.37	-1.9
111,238	-		MPMX19_06608	0.37	+0.6
111,238	-		MPMX19_06608	0.37	-0.7
111,238	-		MPMX19_06608	0.37	+0.7
111,238	-		MPMX19_06608	0.37	-1.6
111,238	-		MPMX19_06608	0.37	+0.3
111,240	+		MPMX19_06608	0.37	-0.1
111,240	+		MPMX19_06608	0.37	-2.6
111,240	+		MPMX19_06608	0.37	+0.7
111,240	+		MPMX19_06608	0.37	+0.4
111,240	+		MPMX19_06608	0.37	-0.2
111,240	+		MPMX19_06608	0.37	-1.3
111,240	+		MPMX19_06608	0.37	-0.1
111,240	+		MPMX19_06608	0.37	+1.1
111,240	+		MPMX19_06608	0.37	-0.3
111,241	-		MPMX19_06608	0.37	+0.0
111,241	-		MPMX19_06608	0.37	-0.3
111,241	-		MPMX19_06608	0.37	-1.1
111,241	-		MPMX19_06608	0.37	-0.7
111,241	-		MPMX19_06608	0.37	+0.8
111,241	-		MPMX19_06608	0.37	-0.4
111,241	-		MPMX19_06608	0.37	-1.0
111,241	-		MPMX19_06608	0.37	+1.2
111,369	+		MPMX19_06608	0.47	+0.7
111,369	+		MPMX19_06608	0.47	-0.6
111,369	+		MPMX19_06608	0.47	-0.7
111,369	+		MPMX19_06608	0.47	+0.9
111,369	+		MPMX19_06608	0.47	+0.1
111,369	+		MPMX19_06608	0.47	-1.7
111,369	+		MPMX19_06608	0.47	-0.5
111,369	+		MPMX19_06608	0.47	+0.0
111,369	+		MPMX19_06608	0.47	+0.5
111,370	-		MPMX19_06608	0.47	-0.2
111,370	-		MPMX19_06608	0.47	+0.9
111,370	-		MPMX19_06608	0.47	-0.1
111,370	-		MPMX19_06608	0.47	-1.2
111,426	+		MPMX19_06608	0.51	-1.6
111,427	-		MPMX19_06608	0.51	+0.1
111,427	-		MPMX19_06608	0.51	+0.0
111,438	+		MPMX19_06608	0.52	-0.3
111,438	+		MPMX19_06608	0.52	-0.1
111,438	+		MPMX19_06608	0.52	-1.9
111,438	+		MPMX19_06608	0.52	+0.2
111,438	+		MPMX19_06608	0.52	-0.5
111,439	-		MPMX19_06608	0.52	-1.7
111,439	-		MPMX19_06608	0.52	-0.5
111,579	+		MPMX19_06608	0.63	+1.0
111,579	+		MPMX19_06608	0.63	+1.4
111,580	-		MPMX19_06608	0.63	-0.7
111,580	-		MPMX19_06608	0.63	+0.6
111,580	-		MPMX19_06608	0.63	+0.2
111,825	+		MPMX19_06608	0.81	-0.5
111,826	-		MPMX19_06608	0.81	+0.4
111,826	-		MPMX19_06608	0.81	+0.2
111,826	-		MPMX19_06608	0.81	-0.5
111,852	+		MPMX19_06608	0.83	+0.3
111,852	+		MPMX19_06608	0.83	-0.7
111,852	+		MPMX19_06608	0.83	-0.4
111,852	+		MPMX19_06608	0.83	+0.4
111,852	+		MPMX19_06608	0.83	+0.5
111,852	+		MPMX19_06608	0.83	-0.3
111,852	+		MPMX19_06608	0.83	-1.7
111,852	+		MPMX19_06608	0.83	+0.3
111,852	+		MPMX19_06608	0.83	-1.3
111,852	+		MPMX19_06608	0.83	-0.4
111,852	+		MPMX19_06608	0.83	-0.3
111,852	+		MPMX19_06608	0.83	+0.7
111,853	-		MPMX19_06608	0.83	+0.3
111,853	-		MPMX19_06608	0.83	-1.1
111,853	-		MPMX19_06608	0.83	-0.1
111,853	-		MPMX19_06608	0.83	-0.2
111,853	-		MPMX19_06608	0.83	-1.2
111,853	-		MPMX19_06608	0.83	+0.5
111,853	-		MPMX19_06608	0.83	-2.2
111,853	-		MPMX19_06608	0.83	-0.5
111,853	-		MPMX19_06608	0.83	-2.0
111,853	-		MPMX19_06608	0.83	-0.5
111,954	+				+1.8
111,954	+				-2.1
111,954	+				+1.0
111,954	+				+1.6
111,955	-				+0.8
111,955	-				-3.3
111,955	-				+1.3
111,955	-				+0.5
111,955	-				-0.9
111,955	-				+0.6
111,955	-				-0.5
111,955	-				-0.2
111,955	-				-0.7
111,955	-				-0.7
111,955	-				-0.1
112,132	-				-1.0
112,132	-				-0.5
112,132	-				+0.3
112,132	-				-0.5
112,132	-				-0.2
112,132	-				+1.1
112,132	-				-0.6
112,132	-				-1.4
112,132	-				-0.6
112,132	-				-0.8
112,215	+				-0.7
112,215	+				+0.4
112,215	+				-0.9
112,215	+				-0.4
112,215	+				-1.1
112,215	+				+0.6
112,215	+				-0.2
112,215	+				-1.2
112,215	+				-0.6
112,215	+				+0.3
112,215	+				-0.3
112,215	+				-0.4
112,215	+				-0.6
112,215	+				-1.2
112,501	+		MPMX19_06609	0.11	-0.5
112,561	+		MPMX19_06609	0.15	-1.3
112,561	+		MPMX19_06609	0.15	+0.2
112,561	+		MPMX19_06609	0.15	+0.4
112,561	+		MPMX19_06609	0.15	-1.7
112,562	-		MPMX19_06609	0.15	-0.1
112,562	-		MPMX19_06609	0.15	+0.3
112,562	-		MPMX19_06609	0.15	-0.2
112,663	+		MPMX19_06609	0.21	-0.4
112,664	-		MPMX19_06609	0.21	+0.0
112,664	-		MPMX19_06609	0.21	-0.4
112,664	-		MPMX19_06609	0.21	-0.2
112,940	-		MPMX19_06609	0.39	+0.7
112,940	-		MPMX19_06609	0.39	-0.7
112,940	-		MPMX19_06609	0.39	+0.0