Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01949

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
2,030,078	+		MPMX19_01948	0.75	-0.4
2,030,078	+		MPMX19_01948	0.75	-1.6
2,030,078	+		MPMX19_01948	0.75	-2.9
2,030,079	-		MPMX19_01948	0.75	-1.8
2,030,079	-		MPMX19_01948	0.75	+0.0
2,030,079	-		MPMX19_01948	0.75	-0.4
2,030,079	-		MPMX19_01948	0.75	-0.7
2,030,276	+		MPMX19_01948	0.83	+0.9
2,030,276	+		MPMX19_01948	0.83	+0.4
2,030,276	+		MPMX19_01948	0.83	+1.5
2,030,276	+		MPMX19_01948	0.83	-0.2
2,030,276	+		MPMX19_01948	0.83	-0.6
2,030,276	+		MPMX19_01948	0.83	-0.5
2,030,276	+		MPMX19_01948	0.83	+0.8
2,030,276	+		MPMX19_01948	0.83	-0.9
2,030,276	+		MPMX19_01948	0.83	+1.3
2,030,276	+		MPMX19_01948	0.83	+1.2
2,030,276	+		MPMX19_01948	0.83	-1.0
2,030,277	-		MPMX19_01948	0.83	+1.2
2,030,277	-		MPMX19_01948	0.83	+1.0
2,030,277	-		MPMX19_01948	0.83	+1.1
2,030,277	-		MPMX19_01948	0.83	+0.3
2,030,277	-		MPMX19_01948	0.83	+0.4
2,030,277	-		MPMX19_01948	0.83	-1.0
2,030,277	-		MPMX19_01948	0.83	-0.9
2,030,277	-		MPMX19_01948	0.83	+1.4
2,030,277	-		MPMX19_01948	0.83	+0.3
2,030,277	-		MPMX19_01948	0.83	-0.1
2,030,277	-		MPMX19_01948	0.83	-1.1
2,030,277	-		MPMX19_01948	0.83	+0.8
2,030,753	+		MPMX19_01949	0.16	+0.1
2,030,753	+		MPMX19_01949	0.16	+0.9
2,030,753	+		MPMX19_01949	0.16	-0.5
2,030,753	+		MPMX19_01949	0.16	+0.9
2,030,753	+		MPMX19_01949	0.16	+0.3
2,030,753	+		MPMX19_01949	0.16	-0.5
2,030,753	+		MPMX19_01949	0.16	+0.7
2,030,753	+		MPMX19_01949	0.16	+0.6
2,030,753	+		MPMX19_01949	0.16	-1.9
2,030,753	+		MPMX19_01949	0.16	+0.4
2,030,753	+		MPMX19_01949	0.16	-0.8
2,030,753	+		MPMX19_01949	0.16	-0.2
2,030,753	+		MPMX19_01949	0.16	-0.1
2,030,753	+		MPMX19_01949	0.16	+0.9
2,030,753	+		MPMX19_01949	0.16	+0.4
2,030,753	+		MPMX19_01949	0.16	+0.5
2,030,753	+		MPMX19_01949	0.16	+2.1
2,030,753	+		MPMX19_01949	0.16	+1.7
2,030,753	+		MPMX19_01949	0.16	+1.0
2,030,753	+		MPMX19_01949	0.16	-0.1
2,030,753	+		MPMX19_01949	0.16	+0.8
2,030,753	+		MPMX19_01949	0.16	+0.4
2,030,753	+		MPMX19_01949	0.16	+0.2
2,030,753	+		MPMX19_01949	0.16	+0.3
2,030,753	+		MPMX19_01949	0.16	+1.2
2,030,753	+		MPMX19_01949	0.16	-0.6
2,030,753	+		MPMX19_01949	0.16	+1.8
2,030,753	+		MPMX19_01949	0.16	+0.5
2,030,753	+		MPMX19_01949	0.16	-0.6
2,030,753	+		MPMX19_01949	0.16	-0.5
2,030,753	+		MPMX19_01949	0.16	+0.8
2,030,753	+		MPMX19_01949	0.16	-0.5
2,030,753	+		MPMX19_01949	0.16	-2.5
2,030,753	+		MPMX19_01949	0.16	+0.5
2,030,753	+		MPMX19_01949	0.16	+0.9
2,030,753	+		MPMX19_01949	0.16	-0.4
2,030,753	+		MPMX19_01949	0.16	+0.5
2,030,753	+		MPMX19_01949	0.16	+0.5
2,030,753	+		MPMX19_01949	0.16	+1.3
2,030,753	+		MPMX19_01949	0.16	-1.9
2,030,753	+		MPMX19_01949	0.16	-0.3
2,030,753	+		MPMX19_01949	0.16	+0.9
2,030,753	+		MPMX19_01949	0.16	-0.6
2,030,753	+		MPMX19_01949	0.16	+1.3
2,030,753	+		MPMX19_01949	0.16	+0.4
2,030,753	+		MPMX19_01949	0.16	-0.2
2,030,753	+		MPMX19_01949	0.16	-0.5
2,030,753	+		MPMX19_01949	0.16	+0.2
2,030,753	+		MPMX19_01949	0.16	+1.3
2,030,753	+		MPMX19_01949	0.16	-1.3
2,030,753	+		MPMX19_01949	0.16	+0.4
2,030,753	+		MPMX19_01949	0.16	-1.0
2,030,753	+		MPMX19_01949	0.16	+0.8
2,030,753	+		MPMX19_01949	0.16	+0.8
2,030,753	+		MPMX19_01949	0.16	-0.3
2,030,754	-		MPMX19_01949	0.16	+0.4
2,030,754	-		MPMX19_01949	0.16	+0.0
2,030,754	-		MPMX19_01949	0.16	+1.1
2,030,754	-		MPMX19_01949	0.16	-1.7
2,030,754	-		MPMX19_01949	0.16	+0.8
2,030,754	-		MPMX19_01949	0.16	+0.7
2,030,754	-		MPMX19_01949	0.16	-1.2
2,030,754	-		MPMX19_01949	0.16	+1.4
2,030,754	-		MPMX19_01949	0.16	+0.3
2,030,754	-		MPMX19_01949	0.16	+0.2
2,030,754	-		MPMX19_01949	0.16	-0.1
2,030,754	-		MPMX19_01949	0.16	-0.7
2,030,754	-		MPMX19_01949	0.16	-0.5
2,030,754	-		MPMX19_01949	0.16	+0.6
2,030,754	-		MPMX19_01949	0.16	-0.7
2,030,754	-		MPMX19_01949	0.16	-1.4
2,030,754	-		MPMX19_01949	0.16	+0.1
2,030,754	-		MPMX19_01949	0.16	-0.5
2,030,754	-		MPMX19_01949	0.16	+0.2
2,030,754	-		MPMX19_01949	0.16	+1.4
2,030,754	-		MPMX19_01949	0.16	+0.3
2,030,754	-		MPMX19_01949	0.16	+0.9
2,030,754	-		MPMX19_01949	0.16	+0.2
2,030,754	-		MPMX19_01949	0.16	+0.6
2,030,754	-		MPMX19_01949	0.16	+0.3
2,030,754	-		MPMX19_01949	0.16	-0.3
2,030,754	-		MPMX19_01949	0.16	+1.2
2,030,754	-		MPMX19_01949	0.16	+0.7
2,030,754	-		MPMX19_01949	0.16	+1.3
2,030,754	-		MPMX19_01949	0.16	+0.0
2,030,754	-		MPMX19_01949	0.16	+1.8
2,030,754	-		MPMX19_01949	0.16	-0.7
2,030,754	-		MPMX19_01949	0.16	+0.1
2,030,754	-		MPMX19_01949	0.16	+0.5
2,030,754	-		MPMX19_01949	0.16	-0.2
2,030,754	-		MPMX19_01949	0.16	-0.5
2,030,754	-		MPMX19_01949	0.16	-1.3
2,030,754	-		MPMX19_01949	0.16	+0.5
2,030,754	-		MPMX19_01949	0.16	-2.3
2,030,754	-		MPMX19_01949	0.16	-1.5
2,030,754	-		MPMX19_01949	0.16	-0.3
2,030,754	-		MPMX19_01949	0.16	+0.2
2,030,754	-		MPMX19_01949	0.16	-0.2
2,030,754	-		MPMX19_01949	0.16	+0.5
2,030,754	-		MPMX19_01949	0.16	-0.4
2,030,754	-		MPMX19_01949	0.16	-0.8
2,030,754	-		MPMX19_01949	0.16	+0.1
2,030,754	-		MPMX19_01949	0.16	+0.7
2,030,754	-		MPMX19_01949	0.16	+0.2
2,030,754	-		MPMX19_01949	0.16	+0.6
2,030,754	-		MPMX19_01949	0.16	+1.0
2,030,754	-		MPMX19_01949	0.16	-0.1
2,030,754	-		MPMX19_01949	0.16	-1.1
2,030,754	-		MPMX19_01949	0.16	+1.1
2,030,783	+		MPMX19_01949	0.21	-0.2
2,030,783	+		MPMX19_01949	0.21	+0.4
2,030,783	+		MPMX19_01949	0.21	-0.3
2,030,783	+		MPMX19_01949	0.21	-0.6
2,030,783	+		MPMX19_01949	0.21	-0.9
2,030,783	+		MPMX19_01949	0.21	+0.4
2,030,784	-		MPMX19_01949	0.21	-1.1
2,030,784	-		MPMX19_01949	0.21	-0.1
2,030,784	-		MPMX19_01949	0.21	-0.7
2,030,806	+		MPMX19_01949	0.25	-1.1
2,030,807	-		MPMX19_01949	0.26	-0.2
2,030,858	+		MPMX19_01949	0.35	+1.8
2,030,858	+		MPMX19_01949	0.35	+0.0
2,030,858	+		MPMX19_01949	0.35	+0.4
2,030,858	+		MPMX19_01949	0.35	-1.8
2,030,858	+		MPMX19_01949	0.35	+0.8
2,030,858	+		MPMX19_01949	0.35	-0.4
2,030,859	-		MPMX19_01949	0.35	+0.9
2,030,859	-		MPMX19_01949	0.35	+0.2
2,030,859	-		MPMX19_01949	0.35	+0.6
2,030,859	-		MPMX19_01949	0.35	+1.1
2,030,859	-		MPMX19_01949	0.35	-0.8
2,030,859	-		MPMX19_01949	0.35	+1.7
2,030,859	-		MPMX19_01949	0.35	-1.1
2,030,859	-		MPMX19_01949	0.35	-0.5
2,030,859	-		MPMX19_01949	0.35	-0.6
2,030,859	-		MPMX19_01949	0.35	-0.2
2,030,859	-		MPMX19_01949	0.35	-0.1
2,030,859	-		MPMX19_01949	0.35	-2.9
2,031,021	+		MPMX19_01949	0.65	+0.9
2,031,021	+		MPMX19_01949	0.65	+1.3
2,031,021	+		MPMX19_01949	0.65	+0.7
2,031,021	+		MPMX19_01949	0.65	+0.5
2,031,021	+		MPMX19_01949	0.65	-0.1
2,031,021	+		MPMX19_01949	0.65	+0.5
2,031,021	+		MPMX19_01949	0.65	+0.1
2,031,021	+		MPMX19_01949	0.65	+0.6
2,031,021	+		MPMX19_01949	0.65	+1.0
2,031,021	+		MPMX19_01949	0.65	+1.7
2,031,021	+		MPMX19_01949	0.65	+0.4
2,031,021	+		MPMX19_01949	0.65	+0.9
2,031,021	+		MPMX19_01949	0.65	-0.2
2,031,022	-		MPMX19_01949	0.65	+0.8
2,031,022	-		MPMX19_01949	0.65	-0.8
2,031,022	-		MPMX19_01949	0.65	+0.5
2,031,022	-		MPMX19_01949	0.65	-0.1
2,031,022	-		MPMX19_01949	0.65	+0.4
2,031,022	-		MPMX19_01949	0.65	+1.2
2,031,022	-		MPMX19_01949	0.65	+0.4
2,031,022	-		MPMX19_01949	0.65	+1.5
2,031,022	-		MPMX19_01949	0.65	+0.7
2,031,022	-		MPMX19_01949	0.65	-0.2
2,031,022	-		MPMX19_01949	0.65	+0.4
2,031,022	-		MPMX19_01949	0.65	-1.1
2,031,022	-		MPMX19_01949	0.65	-1.6
2,031,089	+		MPMX19_01949	0.78	-0.3
2,031,089	+		MPMX19_01949	0.78	-1.1
2,031,089	+		MPMX19_01949	0.78	+0.4
2,031,089	+		MPMX19_01949	0.78	-0.6
2,031,089	+		MPMX19_01949	0.78	+1.0
2,031,089	+		MPMX19_01949	0.78	+1.8
2,031,090	-		MPMX19_01949	0.78	+0.4
2,031,090	-		MPMX19_01949	0.78	+0.4
2,031,090	-		MPMX19_01949	0.78	+0.2
2,031,104	+		MPMX19_01949	0.81	+0.9
2,031,104	+		MPMX19_01949	0.81	+0.7
2,031,104	+		MPMX19_01949	0.81	+0.0
2,031,104	+		MPMX19_01949	0.81	-0.7
2,031,104	+		MPMX19_01949	0.81	-0.2
2,031,104	+		MPMX19_01949	0.81	-0.1
2,031,104	+		MPMX19_01949	0.81	+2.0
2,031,104	+		MPMX19_01949	0.81	+0.6
2,031,104	+		MPMX19_01949	0.81	+0.3
2,031,104	+		MPMX19_01949	0.81	-0.2
2,031,104	+		MPMX19_01949	0.81	-0.4
2,031,105	-		MPMX19_01949	0.81	+0.2
2,031,105	-		MPMX19_01949	0.81	-0.9
2,031,105	-		MPMX19_01949	0.81	-1.9
2,031,105	-		MPMX19_01949	0.81	+0.4
2,031,105	-		MPMX19_01949	0.81	+0.7
2,031,105	-		MPMX19_01949	0.81	-0.2
2,031,105	-		MPMX19_01949	0.81	+0.2
2,031,105	-		MPMX19_01949	0.81	-2.2
2,031,105	-		MPMX19_01949	0.81	-0.0
2,031,105	-		MPMX19_01949	0.81	+0.2
2,031,105	-		MPMX19_01949	0.81	+0.1
2,031,105	-		MPMX19_01949	0.81	+0.3
2,031,105	-		MPMX19_01949	0.81	+1.2
2,031,105	-		MPMX19_01949	0.81	+0.4
2,031,105	-		MPMX19_01949	0.81	+1.0
2,031,105	-		MPMX19_01949	0.81	+0.7
2,031,105	-		MPMX19_01949	0.81	+0.9
2,031,105	-		MPMX19_01949	0.81	+1.7
2,031,105	-		MPMX19_01949	0.81	+0.1
2,031,105	-		MPMX19_01949	0.81	+1.5
2,031,256	-				-0.7
2,031,256	-				+0.2
2,031,290	+				+0.7
2,031,290	+				-1.1
2,031,290	+				-1.4
2,031,290	+				-0.2
2,031,290	+				-0.4
2,031,290	+				-0.5
2,031,291	-				+1.1
2,031,291	-				-0.5
2,031,291	-				-1.1
2,031,291	-				-0.3
2,031,291	-				+1.2
2,031,402	+				-0.2
2,031,402	+				-0.5
2,031,402	+				-0.1
2,031,402	+				-0.9
2,031,402	+				+0.9
2,031,402	+				-1.1
2,031,402	+				+0.7
2,031,402	+				-0.4
2,031,402	+				-0.9
2,031,402	+				-0.3
2,031,402	+				+1.2
2,031,402	+				+0.6
2,031,402	+				-1.1
2,031,402	+				+0.5
2,031,402	+				+3.0
2,031,402	+				-0.1
2,031,402	+				-0.5
2,031,402	+				-1.1
2,031,402	+				-0.0
2,031,402	+				+0.8
2,031,402	+				-2.2
2,031,402	+				-0.5
2,031,402	+				+0.4
2,031,402	+				+1.1
2,031,403	-				+0.1
2,031,403	-				-0.2
2,031,403	-				+0.5
2,031,403	-				-0.4
2,031,403	-				+0.5
2,031,403	-				+0.2
2,031,403	-				-0.1
2,031,403	-				+0.7
2,031,403	-				+0.1
2,031,403	-				+0.4
2,031,403	-				-0.8
2,031,403	-				+1.4
2,031,403	-				-1.1
2,031,403	-				-0.3
2,031,403	-				+0.0
2,031,403	-				+0.2
2,031,403	-				-0.1
2,031,403	-				-0.3
2,031,519	+				-0.5
2,031,519	+				+0.4
2,031,519	+				-1.1
2,031,519	+				+1.5
2,031,519	+				-1.1
2,031,519	+				+0.4
2,031,519	+				-1.2
2,031,519	+				-0.4
2,031,519	+				-0.3
2,031,519	+				+0.4
2,031,519	+				-0.2
2,031,519	+				-0.8
2,031,520	-				-1.0
2,031,520	-				-1.0
2,031,520	-				+1.2
2,031,520	-				+0.1
2,031,520	-				-0.8
2,031,520	-				+1.0
2,031,520	-				+1.3
2,031,520	-				+0.4
2,031,520	-				+1.2
2,031,613	-		MPMX19_01950	0.13	-0.1
2,031,666	+		MPMX19_01950	0.15	+0.2
2,031,666	+		MPMX19_01950	0.15	-0.2
2,031,666	+		MPMX19_01950	0.15	+0.3
2,031,666	+		MPMX19_01950	0.15	-0.1
2,031,667	-		MPMX19_01950	0.15	+1.3
2,031,667	-		MPMX19_01950	0.15	+1.1
2,031,667	-		MPMX19_01950	0.15	-0.1
2,031,667	-		MPMX19_01950	0.15	-0.8
2,031,667	-		MPMX19_01950	0.15	-0.6
2,031,861	+		MPMX19_01950	0.23	-1.3
2,031,861	+		MPMX19_01950	0.23	+1.5
2,031,861	+		MPMX19_01950	0.23	-1.3
2,031,861	+		MPMX19_01950	0.23	+1.1
2,031,861	+		MPMX19_01950	0.23	+1.2
2,031,862	-		MPMX19_01950	0.23	-0.3
2,031,862	-		MPMX19_01950	0.23	+1.4
2,031,862	-		MPMX19_01950	0.23	+0.2
2,031,862	-		MPMX19_01950	0.23	-0.4
2,031,862	-		MPMX19_01950	0.23	+0.7
2,031,862	-		MPMX19_01950	0.23	-1.9
2,032,023	+		MPMX19_01950	0.29	-0.5