Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01700

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
1,793,372	+				-0.8
1,793,372	+				-1.0
1,793,372	+				-1.8
1,793,372	+				-1.3
1,793,372	+				-1.0
1,793,372	+				-0.5
1,793,372	+				+0.1
1,793,372	+				-1.4
1,793,372	+				-0.4
1,793,372	+				-0.6
1,793,372	+				+0.2
1,793,373	-				+0.2
1,793,373	-				+0.1
1,793,373	-				-0.6
1,793,390	+				+1.1
1,793,391	-				-0.7
1,793,391	-				-0.0
1,793,391	-				+1.3
1,793,591	+				+0.5
1,793,591	+				-1.0
1,793,591	+				-0.4
1,793,591	+				-0.0
1,793,591	+				-1.6
1,793,591	+				+0.9
1,793,591	+				-2.5
1,793,591	+				+0.1
1,793,591	+				-2.4
1,793,592	-				-1.1
1,793,592	-				+0.5
1,793,592	-				-0.5
1,793,592	-				-0.0
1,793,592	-				-2.4
1,793,592	-				-0.2
1,793,592	-				-3.1
1,793,592	-				-0.4
1,793,592	-				+0.7
1,793,592	-				-0.0
1,793,592	-				-1.8
1,793,592	-				+1.5
1,793,592	-				-0.6
1,793,693	+				+0.2
1,793,723	+				-1.6
1,793,723	+				+0.7
1,793,723	+				+0.8
1,793,723	+				-0.6
1,793,723	+				+0.2
1,793,723	+				-1.3
1,793,723	+				-1.5
1,793,723	+				-0.8
1,793,723	+				-0.7
1,793,724	-				-0.1
1,793,724	-				+0.5
1,793,724	-				-1.6
1,793,724	-				+0.5
1,793,724	-				-0.5
1,793,724	-				+0.3
1,793,724	-				-0.0
1,793,724	-				-0.3
1,793,724	-				-0.5
1,793,789	+				-1.0
1,793,789	+				-0.0
1,793,789	+				-0.6
1,793,789	+				-0.2
1,793,789	+				-0.3
1,793,789	+				-0.0
1,793,789	+				-1.1
1,793,789	+				-0.3
1,793,789	+				+0.5
1,793,789	+				-0.8
1,793,789	+				-0.2
1,793,789	+				+0.2
1,793,789	+				+0.1
1,793,789	+				-0.0
1,793,789	+				-0.4
1,793,789	+				-0.5
1,793,789	+				-0.2
1,793,789	+				-1.8
1,793,789	+				+0.3
1,793,790	-				+0.2
1,793,790	-				+0.5
1,793,790	-				+0.1
1,793,790	-				-0.2
1,793,790	-				-1.3
1,793,790	-				+0.9
1,793,790	-				-1.0
1,793,790	-				-0.9
1,793,790	-				+0.6
1,793,790	-				-1.0
1,793,790	-				-1.2
1,793,790	-				-0.0
1,793,790	-				+0.4
1,793,790	-				+1.4
1,793,790	-				-0.1
1,794,144	+				-0.1
1,794,144	+				+0.7
1,794,145	-				-0.5
1,794,145	-				-1.5
1,794,200	+				+0.5
1,794,200	+				-2.2
1,794,200	+				-1.3
1,794,200	+				-0.5
1,794,200	+				+0.2
1,794,200	+				-2.5
1,794,200	+				-0.0
1,794,200	+				+0.5
1,794,200	+				+0.7
1,794,200	+				-0.2
1,794,200	+				-0.5
1,794,200	+				-1.2
1,794,200	+				+0.1
1,794,200	+				-1.8
1,794,200	+				+2.2
1,794,200	+				-0.5
1,794,200	+				+1.8
1,794,201	-				-0.2
1,794,201	-				-0.4
1,794,201	-				-0.1
1,794,201	-				-0.5
1,794,201	-				+2.2
1,794,201	-				-1.4
1,794,201	-				+0.7
1,794,201	-				-0.2
1,794,201	-				-0.6
1,794,201	-				+0.1
1,794,201	-				-0.5
1,794,201	-				+0.0
1,794,201	-				-0.3
1,794,201	-				-0.5
1,794,304	+				+0.1
1,794,304	+				+1.2
1,794,304	+				-0.3
1,794,304	+				-1.9
1,794,305	-				-0.5
1,794,305	-				-0.3
1,794,305	-				-0.2
1,794,305	-				-0.7
1,794,391	+				-0.3
1,794,391	+				+0.2
1,794,391	+				-0.3
1,794,392	-				+0.1
1,794,392	-				+0.5
1,794,392	-				-0.9
1,794,410	+				-0.3
1,794,411	-				-0.5
1,794,411	-				+0.2
1,794,411	-				-1.4
1,794,411	-				+1.2
1,794,658	+		MPMX19_01700	0.28	-0.2
1,794,658	+		MPMX19_01700	0.28	+0.8
1,794,658	+		MPMX19_01700	0.28	+0.4
1,794,658	+		MPMX19_01700	0.28	-0.0
1,794,658	+		MPMX19_01700	0.28	+0.4
1,794,658	+		MPMX19_01700	0.28	+0.2
1,794,658	+		MPMX19_01700	0.28	-0.0
1,794,658	+		MPMX19_01700	0.28	-0.0
1,794,658	+		MPMX19_01700	0.28	-0.6
1,794,658	+		MPMX19_01700	0.28	+1.1
1,794,659	-		MPMX19_01700	0.28	+0.5
1,794,659	-		MPMX19_01700	0.28	-0.7
1,794,659	-		MPMX19_01700	0.28	+0.0
1,794,659	-		MPMX19_01700	0.28	-0.0
1,794,659	-		MPMX19_01700	0.28	-0.4
1,794,659	-		MPMX19_01700	0.28	-0.2
1,794,659	-		MPMX19_01700	0.28	+0.6
1,794,659	-		MPMX19_01700	0.28	+0.5
1,794,659	-		MPMX19_01700	0.28	-1.8
1,794,892	+		MPMX19_01700	0.49	+0.2
1,794,910	+		MPMX19_01700	0.51	+0.8
1,794,910	+		MPMX19_01700	0.51	-0.7
1,794,910	+		MPMX19_01700	0.51	+0.2
1,794,910	+		MPMX19_01700	0.51	-2.8
1,794,910	+		MPMX19_01700	0.51	-0.6
1,794,910	+		MPMX19_01700	0.51	-0.8
1,794,910	+		MPMX19_01700	0.51	-0.1
1,794,910	+		MPMX19_01700	0.51	+1.0
1,794,910	+		MPMX19_01700	0.51	-0.7
1,794,911	-		MPMX19_01700	0.51	+0.1
1,794,911	-		MPMX19_01700	0.51	+0.7
1,794,911	-		MPMX19_01700	0.51	+0.7
1,794,911	-		MPMX19_01700	0.51	-1.5
1,794,911	-		MPMX19_01700	0.51	-2.8
1,794,911	-		MPMX19_01700	0.51	+0.7
1,794,911	-		MPMX19_01700	0.51	+0.2
1,794,911	-		MPMX19_01700	0.51	-0.4
1,794,911	-		MPMX19_01700	0.51	+0.5
1,794,911	-		MPMX19_01700	0.51	+0.3
1,794,911	-		MPMX19_01700	0.51	+0.5
1,794,911	-		MPMX19_01700	0.51	-0.5
1,794,911	-		MPMX19_01700	0.51	+0.2
1,794,911	-		MPMX19_01700	0.51	-0.2
1,794,911	-		MPMX19_01700	0.51	-1.6
1,794,911	-		MPMX19_01700	0.51	-1.0
1,794,911	-		MPMX19_01700	0.51	+1.2
1,794,911	-		MPMX19_01700	0.51	-0.8
1,794,911	-		MPMX19_01700	0.51	-0.3
1,794,911	-		MPMX19_01700	0.51	-0.7
1,794,911	-		MPMX19_01700	0.51	-2.5
1,794,911	-		MPMX19_01700	0.51	-1.0
1,794,911	-		MPMX19_01700	0.51	-0.9
1,794,911	-		MPMX19_01700	0.51	+0.0
1,794,911	-		MPMX19_01700	0.51	-0.7
1,794,911	-		MPMX19_01700	0.51	-0.7
1,794,911	-		MPMX19_01700	0.51	+0.7
1,794,911	-		MPMX19_01700	0.51	+0.1
1,795,159	+		MPMX19_01700	0.73	-0.8
1,795,160	-		MPMX19_01700	0.73	+0.4
1,795,160	-		MPMX19_01700	0.73	+0.3
1,795,172	+		MPMX19_01700	0.74	-1.0
1,795,172	+		MPMX19_01700	0.74	-0.6
1,795,172	+		MPMX19_01700	0.74	-0.1
1,795,172	+		MPMX19_01700	0.74	-0.7
1,795,172	+		MPMX19_01700	0.74	-0.8
1,795,172	+		MPMX19_01700	0.74	+0.5
1,795,172	+		MPMX19_01700	0.74	+1.8
1,795,172	+		MPMX19_01700	0.74	-0.8
1,795,172	+		MPMX19_01700	0.74	-0.5
1,795,172	+		MPMX19_01700	0.74	-0.5
1,795,172	+		MPMX19_01700	0.74	+0.5
1,795,172	+		MPMX19_01700	0.74	-0.4
1,795,172	+		MPMX19_01700	0.74	-0.2
1,795,172	+		MPMX19_01700	0.74	-0.7
1,795,172	+		MPMX19_01700	0.74	+1.0
1,795,173	-		MPMX19_01700	0.75	-1.3
1,795,173	-		MPMX19_01700	0.75	+0.4
1,795,173	-		MPMX19_01700	0.75	+0.5
1,795,173	-		MPMX19_01700	0.75	+0.7
1,795,173	-		MPMX19_01700	0.75	-0.8
1,795,173	-		MPMX19_01700	0.75	+0.3
1,795,173	-		MPMX19_01700	0.75	+0.1
1,795,173	-		MPMX19_01700	0.75	+0.5
1,795,173	-		MPMX19_01700	0.75	+0.5
1,795,173	-		MPMX19_01700	0.75	-0.7
1,795,173	-		MPMX19_01700	0.75	-1.5
1,795,173	-		MPMX19_01700	0.75	-0.6
1,795,173	-		MPMX19_01700	0.75	+0.5
1,795,173	-		MPMX19_01700	0.75	+0.8
1,795,173	-		MPMX19_01700	0.75	-0.1
1,795,173	-		MPMX19_01700	0.75	-0.0
1,795,173	-		MPMX19_01700	0.75	+0.3
1,795,173	-		MPMX19_01700	0.75	+0.7
1,795,173	-		MPMX19_01700	0.75	+2.2
1,795,173	-		MPMX19_01700	0.75	-0.8
1,795,196	+		MPMX19_01700	0.77	-0.5
1,795,264	-		MPMX19_01700	0.83	-2.0
1,795,415	+				+0.3
1,795,416	-				+0.3
1,795,416	-				-0.5
1,795,416	-				-0.7
1,795,458	+				-1.5
1,795,458	+				-2.2
1,795,458	+				+0.6
1,795,458	+				-2.2
1,795,458	+				-0.3
1,795,458	+				+0.1
1,795,458	+				-1.2
1,795,459	-				+0.5
1,795,459	-				-0.1
1,795,459	-				-0.0
1,795,459	-				-1.0
1,795,459	-				+1.4
1,795,492	+				-1.5
1,795,492	+				+0.2
1,795,492	+				+0.4
1,795,492	+				-1.3
1,795,492	+				+0.3
1,795,493	-				+1.9
1,795,493	-				+1.8
1,795,493	-				-1.8
1,795,493	-				-2.3
1,795,493	-				+0.8
1,795,493	-				-1.2
1,795,493	-				-1.0
1,795,567	+				-0.8
1,795,567	+				-0.7
1,795,567	+				-0.0
1,795,567	+				-1.0
1,795,567	+				-0.8
1,795,568	-				+1.5
1,795,568	-				+0.4
1,795,568	-				-0.8
1,795,666	+				-0.5
1,795,666	+				-1.7
1,795,666	+				-0.1
1,795,666	+				+0.0
1,795,667	-				-1.4
1,795,667	-				+0.7
1,795,667	-				-0.2
1,795,667	-				+0.4
1,795,667	-				-0.8
1,795,667	-				-0.0
1,795,667	-				+0.2
1,795,667	-				-0.5
1,795,667	-				-0.0
1,795,696	-				-0.5
1,795,696	-				+2.3
1,796,023	+		MPMX19_01701	0.19	+0.5
1,796,023	+		MPMX19_01701	0.19	+0.6
1,796,023	+		MPMX19_01701	0.19	+0.5
1,796,023	+		MPMX19_01701	0.19	+0.5
1,796,023	+		MPMX19_01701	0.19	-0.4
1,796,023	+		MPMX19_01701	0.19	+0.5
1,796,023	+		MPMX19_01701	0.19	-0.1
1,796,023	+		MPMX19_01701	0.19	-2.5
1,796,024	-		MPMX19_01701	0.19	+0.0
1,796,024	-		MPMX19_01701	0.19	+0.2
1,796,024	-		MPMX19_01701	0.19	+0.8
1,796,024	-		MPMX19_01701	0.19	-1.0
1,796,024	-		MPMX19_01701	0.19	-0.8
1,796,024	-		MPMX19_01701	0.19	-0.5
1,796,034	+		MPMX19_01701	0.19	+0.7
1,796,034	+		MPMX19_01701	0.19	+0.4
1,796,034	+		MPMX19_01701	0.19	-0.6
1,796,034	+		MPMX19_01701	0.19	+0.4
1,796,034	+		MPMX19_01701	0.19	+0.1
1,796,034	+		MPMX19_01701	0.19	-1.8
1,796,034	+		MPMX19_01701	0.19	+0.1
1,796,034	+		MPMX19_01701	0.19	+0.9
1,796,034	+		MPMX19_01701	0.19	-0.2
1,796,034	+		MPMX19_01701	0.19	-0.5
1,796,034	+		MPMX19_01701	0.19	-1.4
1,796,034	+		MPMX19_01701	0.19	+0.3
1,796,034	+		MPMX19_01701	0.19	-0.2
1,796,034	+		MPMX19_01701	0.19	+0.1
1,796,034	+		MPMX19_01701	0.19	+0.3
1,796,034	+		MPMX19_01701	0.19	+0.1
1,796,034	+		MPMX19_01701	0.19	-1.4
1,796,035	-		MPMX19_01701	0.19	+0.5
1,796,035	-		MPMX19_01701	0.19	-0.3
1,796,035	-		MPMX19_01701	0.19	+0.7
1,796,035	-		MPMX19_01701	0.19	+0.3
1,796,035	-		MPMX19_01701	0.19	-0.6
1,796,035	-		MPMX19_01701	0.19	+0.4
1,796,035	-		MPMX19_01701	0.19	-0.6
1,796,035	-		MPMX19_01701	0.19	+1.1
1,796,035	-		MPMX19_01701	0.19	+1.0
1,796,035	-		MPMX19_01701	0.19	-1.9
1,796,035	-		MPMX19_01701	0.19	-1.6
1,796,035	-		MPMX19_01701	0.19	-0.0
1,796,082	+		MPMX19_01701	0.21	+0.5
1,796,293	+		MPMX19_01701	0.30	-0.3
1,796,294	-		MPMX19_01701	0.30	-0.5
1,796,294	-		MPMX19_01701	0.30	+0.3
1,796,294	-		MPMX19_01701	0.30	-0.0
1,796,294	-		MPMX19_01701	0.30	-1.3