Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01481

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
1,555,550	+		MPMX19_01480	0.12	+0.9
1,555,550	+		MPMX19_01480	0.12	+0.4
1,555,550	+		MPMX19_01480	0.12	+1.6
1,555,550	+		MPMX19_01480	0.12	+0.4
1,555,550	+		MPMX19_01480	0.12	+0.7
1,555,550	+		MPMX19_01480	0.12	-1.3
1,555,550	+		MPMX19_01480	0.12	+1.1
1,555,550	+		MPMX19_01480	0.12	+1.6
1,555,550	+		MPMX19_01480	0.12	+0.7
1,555,550	+		MPMX19_01480	0.12	-0.9
1,555,551	-		MPMX19_01480	0.12	+0.9
1,555,551	-		MPMX19_01480	0.12	+0.3
1,555,551	-		MPMX19_01480	0.12	+0.8
1,555,551	-		MPMX19_01480	0.12	+2.4
1,555,551	-		MPMX19_01480	0.12	+1.3
1,555,551	-		MPMX19_01480	0.12	+2.5
1,556,071	+		MPMX19_01480	0.90	+1.1
1,556,071	+		MPMX19_01480	0.90	+1.0
1,556,071	+		MPMX19_01480	0.90	+0.5
1,556,072	-				-0.1
1,556,138	+				+0.9
1,556,138	+				+0.9
1,556,138	+				+0.5
1,556,138	+				-2.1
1,556,138	+				-0.2
1,556,138	+				+2.1
1,556,138	+				+0.9
1,556,139	-				-0.6
1,556,139	-				-3.0
1,556,139	-				+0.8
1,556,139	-				+1.1
1,556,139	-				+0.7
1,556,139	-				+1.2
1,556,139	-				-0.7
1,556,139	-				-1.1
1,556,139	-				+0.1
1,556,139	-				-0.5
1,556,209	+				+1.7
1,556,209	+				+0.6
1,556,209	+				+1.7
1,556,249	+		MPMX19_01481	0.11	+0.5
1,556,249	+		MPMX19_01481	0.11	+1.3
1,556,249	+		MPMX19_01481	0.11	-0.3
1,556,249	+		MPMX19_01481	0.11	+0.9
1,556,249	+		MPMX19_01481	0.11	-0.5
1,556,249	+		MPMX19_01481	0.11	+0.8
1,556,250	-		MPMX19_01481	0.11	-1.2
1,556,250	-		MPMX19_01481	0.11	-0.2
1,556,250	-		MPMX19_01481	0.11	+0.3
1,556,250	-		MPMX19_01481	0.11	-1.1
1,556,250	-		MPMX19_01481	0.11	+0.1
1,556,250	-		MPMX19_01481	0.11	+0.2
1,556,250	-		MPMX19_01481	0.11	+0.1
1,556,250	-		MPMX19_01481	0.11	+0.4
1,556,250	-		MPMX19_01481	0.11	+0.4
1,556,250	-		MPMX19_01481	0.11	-0.9
1,556,469	+		MPMX19_01481	0.31	+1.1
1,556,469	+		MPMX19_01481	0.31	+0.6
1,556,469	+		MPMX19_01481	0.31	+0.9
1,556,469	+		MPMX19_01481	0.31	+0.8
1,556,469	+		MPMX19_01481	0.31	+1.0
1,556,470	-		MPMX19_01481	0.31	-0.5
1,556,691	+		MPMX19_01481	0.52	+1.9
1,556,691	+		MPMX19_01481	0.52	+1.0
1,556,691	+		MPMX19_01481	0.52	+1.9
1,556,691	+		MPMX19_01481	0.52	+0.3
1,556,691	+		MPMX19_01481	0.52	+0.6
1,556,691	+		MPMX19_01481	0.52	+1.3
1,556,691	+		MPMX19_01481	0.52	-1.4
1,556,691	+		MPMX19_01481	0.52	+2.3
1,556,692	-		MPMX19_01481	0.52	+0.4
1,556,692	-		MPMX19_01481	0.52	-1.2
1,556,692	-		MPMX19_01481	0.52	+1.3
1,556,692	-		MPMX19_01481	0.52	-1.1
1,556,692	-		MPMX19_01481	0.52	-1.1
1,556,692	-		MPMX19_01481	0.52	+0.7
1,556,760	+		MPMX19_01481	0.58	-0.1
1,556,760	+		MPMX19_01481	0.58	+1.2
1,556,760	+		MPMX19_01481	0.58	-0.1
1,556,760	+		MPMX19_01481	0.58	+0.9
1,556,760	+		MPMX19_01481	0.58	+0.6
1,556,760	+		MPMX19_01481	0.58	+0.8
1,556,761	-		MPMX19_01481	0.58	-1.2
1,556,761	-		MPMX19_01481	0.58	+0.1
1,556,761	-		MPMX19_01481	0.58	+0.2
1,556,761	-		MPMX19_01481	0.58	-0.3
1,556,761	-		MPMX19_01481	0.58	-0.1
1,556,761	-		MPMX19_01481	0.58	+1.7
1,556,761	-		MPMX19_01481	0.58	-1.9
1,556,761	-		MPMX19_01481	0.58	+1.3
1,556,761	-		MPMX19_01481	0.58	-0.1
1,556,761	-		MPMX19_01481	0.58	-1.3
1,556,761	-		MPMX19_01481	0.58	+0.6
1,556,793	+		MPMX19_01481	0.61	+0.5
1,556,793	+		MPMX19_01481	0.61	-0.3
1,556,793	+		MPMX19_01481	0.61	+0.9
1,556,793	+		MPMX19_01481	0.61	+1.1
1,556,793	+		MPMX19_01481	0.61	+1.3
1,556,793	+		MPMX19_01481	0.61	+0.7
1,556,793	+		MPMX19_01481	0.61	+1.2
1,556,794	-		MPMX19_01481	0.61	+1.4
1,556,794	-		MPMX19_01481	0.61	-0.6
1,556,794	-		MPMX19_01481	0.61	-1.5
1,556,794	-		MPMX19_01481	0.61	-1.3
1,556,794	-		MPMX19_01481	0.61	-1.6
1,556,794	-		MPMX19_01481	0.61	-0.1
1,556,794	-		MPMX19_01481	0.61	-0.5
1,556,794	-		MPMX19_01481	0.61	-1.2
1,556,856	+		MPMX19_01481	0.67	+0.6
1,556,856	+		MPMX19_01481	0.67	+0.9
1,556,856	+		MPMX19_01481	0.67	+2.4
1,556,856	+		MPMX19_01481	0.67	+1.3
1,556,856	+		MPMX19_01481	0.67	+1.5
1,556,856	+		MPMX19_01481	0.67	+1.5
1,556,857	-		MPMX19_01481	0.67	-1.1
1,556,857	-		MPMX19_01481	0.67	+1.2
1,556,857	-		MPMX19_01481	0.67	-1.2
1,556,969	+		MPMX19_01481	0.78	-0.3
1,556,969	+		MPMX19_01481	0.78	+0.5
1,556,969	+		MPMX19_01481	0.78	+1.2
1,556,969	+		MPMX19_01481	0.78	+0.2
1,556,969	+		MPMX19_01481	0.78	-1.5
1,556,969	+		MPMX19_01481	0.78	+1.0
1,556,969	+		MPMX19_01481	0.78	+1.2
1,556,969	+		MPMX19_01481	0.78	+0.4
1,556,969	+		MPMX19_01481	0.78	+0.9
1,556,969	+		MPMX19_01481	0.78	-0.1
1,556,969	+		MPMX19_01481	0.78	+1.4
1,556,969	+		MPMX19_01481	0.78	+1.1
1,556,969	+		MPMX19_01481	0.78	+1.1
1,556,970	-		MPMX19_01481	0.78	+0.8
1,556,970	-		MPMX19_01481	0.78	-0.1
1,556,970	-		MPMX19_01481	0.78	+1.7
1,556,970	-		MPMX19_01481	0.78	+0.1
1,556,970	-		MPMX19_01481	0.78	-0.1
1,556,970	-		MPMX19_01481	0.78	+1.5
1,556,970	-		MPMX19_01481	0.78	+0.3
1,556,970	-		MPMX19_01481	0.78	+1.1
1,556,970	-		MPMX19_01481	0.78	-0.1
1,556,970	-		MPMX19_01481	0.78	-0.5
1,556,970	-		MPMX19_01481	0.78	+0.2
1,556,970	-		MPMX19_01481	0.78	+0.4
1,556,970	-		MPMX19_01481	0.78	-2.4
1,556,970	-		MPMX19_01481	0.78	-0.1
1,556,970	-		MPMX19_01481	0.78	+0.2
1,556,988	+		MPMX19_01481	0.79	+1.8
1,556,988	+		MPMX19_01481	0.79	+1.1
1,556,988	+		MPMX19_01481	0.79	+0.8
1,556,988	+		MPMX19_01481	0.79	+1.7
1,556,988	+		MPMX19_01481	0.79	+1.1
1,556,988	+		MPMX19_01481	0.79	+1.4
1,556,988	+		MPMX19_01481	0.79	+1.6
1,556,988	+		MPMX19_01481	0.79	+0.3
1,556,988	+		MPMX19_01481	0.79	+3.1
1,556,988	+		MPMX19_01481	0.79	+0.5
1,556,989	-		MPMX19_01481	0.80	-0.0
1,556,989	-		MPMX19_01481	0.80	-0.5
1,556,989	-		MPMX19_01481	0.80	+1.2
1,556,989	-		MPMX19_01481	0.80	+0.4
1,556,989	-		MPMX19_01481	0.80	-1.6
1,556,989	-		MPMX19_01481	0.80	+0.8
1,556,989	-		MPMX19_01481	0.80	-0.5
1,556,989	-		MPMX19_01481	0.80	-1.8
1,556,989	-		MPMX19_01481	0.80	+1.4
1,556,989	-		MPMX19_01481	0.80	-0.8
1,556,989	-		MPMX19_01481	0.80	+0.3
1,557,331	+		MPMX19_01482	0.17	+2.5
1,557,331	+		MPMX19_01482	0.17	+1.3
1,557,331	+		MPMX19_01482	0.17	+1.0
1,557,331	+		MPMX19_01482	0.17	+0.9
1,557,331	+		MPMX19_01482	0.17	+0.3
1,557,331	+		MPMX19_01482	0.17	+0.8
1,557,331	+		MPMX19_01482	0.17	+0.8
1,557,331	+		MPMX19_01482	0.17	+0.1
1,557,331	+		MPMX19_01482	0.17	+0.8
1,557,331	+		MPMX19_01482	0.17	+0.5
1,557,331	+		MPMX19_01482	0.17	+1.2
1,557,331	+		MPMX19_01482	0.17	+0.2
1,557,331	+		MPMX19_01482	0.17	+1.5
1,557,332	-		MPMX19_01482	0.17	+0.3
1,557,332	-		MPMX19_01482	0.17	+1.7
1,557,332	-		MPMX19_01482	0.17	+0.7
1,557,332	-		MPMX19_01482	0.17	+1.3
1,557,332	-		MPMX19_01482	0.17	+1.3
1,557,332	-		MPMX19_01482	0.17	+1.1
1,557,332	-		MPMX19_01482	0.17	+0.5
1,557,332	-		MPMX19_01482	0.17	+1.0
1,557,332	-		MPMX19_01482	0.17	+0.5
1,557,332	-		MPMX19_01482	0.17	+0.7
1,557,332	-		MPMX19_01482	0.17	+1.3
1,557,379	+		MPMX19_01482	0.26	+1.0
1,557,379	+		MPMX19_01482	0.26	+0.1
1,557,379	+		MPMX19_01482	0.26	+1.1
1,557,379	+		MPMX19_01482	0.26	+2.0
1,557,379	+		MPMX19_01482	0.26	+0.6
1,557,380	-		MPMX19_01482	0.26	+0.7
1,557,380	-		MPMX19_01482	0.26	+1.1
1,557,380	-		MPMX19_01482	0.26	+0.5
1,557,380	-		MPMX19_01482	0.26	+1.2
1,557,380	-		MPMX19_01482	0.26	-0.2
1,557,529	+		MPMX19_01482	0.53	+1.0
1,557,529	+		MPMX19_01482	0.53	+1.3
1,557,529	+		MPMX19_01482	0.53	+1.5
1,557,529	+		MPMX19_01482	0.53	+1.0
1,557,529	+		MPMX19_01482	0.53	+1.3
1,557,529	+		MPMX19_01482	0.53	+0.5
1,557,529	+		MPMX19_01482	0.53	+1.3
1,557,529	+		MPMX19_01482	0.53	+1.5
1,557,529	+		MPMX19_01482	0.53	+0.9
1,557,529	+		MPMX19_01482	0.53	+1.1
1,557,529	+		MPMX19_01482	0.53	+0.9
1,557,529	+		MPMX19_01482	0.53	+0.0
1,557,529	+		MPMX19_01482	0.53	+1.2
1,557,530	-		MPMX19_01482	0.53	+1.1
1,557,530	-		MPMX19_01482	0.53	+0.6
1,557,530	-		MPMX19_01482	0.53	+0.9
1,557,530	-		MPMX19_01482	0.53	+2.3
1,557,530	-		MPMX19_01482	0.53	+1.2
1,557,530	-		MPMX19_01482	0.53	+1.5
1,557,530	-		MPMX19_01482	0.53	+1.5
1,557,530	-		MPMX19_01482	0.53	+1.3
1,557,530	-		MPMX19_01482	0.53	+0.9
1,557,530	-		MPMX19_01482	0.53	+0.9
1,557,530	-		MPMX19_01482	0.53	+0.5
1,557,530	-		MPMX19_01482	0.53	+0.7
1,557,664	+		MPMX19_01482	0.77	+1.1
1,557,664	+		MPMX19_01482	0.77	+1.5
1,557,664	+		MPMX19_01482	0.77	+1.3
1,557,664	+		MPMX19_01482	0.77	+0.3
1,557,664	+		MPMX19_01482	0.77	+1.6
1,557,664	+		MPMX19_01482	0.77	+1.7
1,557,664	+		MPMX19_01482	0.77	+2.0
1,557,664	+		MPMX19_01482	0.77	+2.3
1,557,664	+		MPMX19_01482	0.77	+2.3
1,557,664	+		MPMX19_01482	0.77	+0.7
1,557,665	-		MPMX19_01482	0.77	+0.7
1,557,665	-		MPMX19_01482	0.77	+0.3
1,557,665	-		MPMX19_01482	0.77	+0.9
1,557,665	-		MPMX19_01482	0.77	-0.4
1,557,814	+				+0.5
1,557,814	+				+1.3
1,557,814	+				+1.1
1,557,814	+				+1.2
1,557,814	+				+0.6
1,557,815	-				+0.7
1,557,815	-				-0.5
1,557,815	-				+0.7
1,557,815	-				+0.7
1,557,815	-				-0.1
1,557,857	+				+0.2
1,557,868	+				-0.1
1,557,872	+				+0.7
1,557,872	+				+1.4
1,557,872	+				+0.9
1,557,872	+				+0.6
1,557,872	+				+1.4
1,557,872	+				+0.2
1,557,872	+				+1.2
1,557,872	+				+1.5
1,557,872	+				+0.5
1,557,872	+				+0.2
1,557,872	+				+1.5
1,557,872	+				+0.5
1,557,872	+				+0.2
1,557,872	+				+1.1
1,557,872	+				-0.8
1,557,872	+				+1.0
1,557,872	+				+1.3
1,557,872	+				+1.9
1,557,872	+				-1.1
1,557,872	+				+0.5
1,557,873	-				-3.0
1,557,873	-				+0.4
1,557,873	-				-0.5
1,557,873	-				-0.6
1,557,873	-				-0.2
1,557,873	-				-1.6
1,557,873	-				+1.7
1,557,873	-				+1.5
1,557,873	-				-0.9
1,557,873	-				+1.1
1,557,873	-				+1.9
1,557,873	-				-0.4
1,557,873	-				+0.1
1,557,873	-				+0.5
1,557,873	-				-0.6
1,557,875	+				+0.5
1,557,875	+				+1.5
1,557,875	+				+0.4
1,557,875	+				+1.1
1,557,875	+				+1.2
1,557,876	-				+0.2
1,557,876	-				+1.5
1,557,876	-				-0.5
1,557,876	-				+0.6
1,557,876	-				-0.2
1,557,876	-				+0.2
1,557,876	-				+0.2
1,557,876	-				-0.4
1,557,876	-				-0.9
1,557,876	-				+0.4