Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01123

Experiment: NL-CCM; ambient oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; ambient oxygen
1,156,786	+				+0.6
1,156,786	+				-0.8
1,156,786	+				+0.8
1,156,786	+				+0.3
1,156,786	+				+0.5
1,156,786	+				+0.7
1,156,786	+				+1.1
1,156,786	+				-2.9
1,156,786	+				-0.3
1,156,786	+				+0.2
1,156,786	+				+0.7
1,156,786	+				+0.3
1,156,786	+				-1.0
1,156,786	+				-0.1
1,156,786	+				-0.8
1,156,786	+				-1.6
1,156,786	+				-1.8
1,156,787	-				-0.4
1,156,787	-				+0.8
1,156,787	-				+0.8
1,156,787	-				-1.8
1,156,787	-				-1.2
1,156,787	-				+0.0
1,156,787	-				+0.7
1,156,787	-				-1.2
1,156,787	-				+0.1
1,156,787	-				-0.8
1,156,787	-				-3.1
1,156,787	-				-0.6
1,156,787	-				-0.7
1,156,804	+				+0.1
1,156,804	+				-1.0
1,156,805	-				-0.4
1,156,805	-				-2.8
1,156,805	-				-2.0
1,156,805	-				+1.2
1,156,805	-				-0.1
1,156,870	+				+0.3
1,156,870	+				+0.7
1,156,870	+				+0.4
1,156,871	-				+0.1
1,156,871	-				-1.9
1,156,871	-				-1.3
1,156,871	-				-0.8
1,156,871	-				-0.9
1,157,011	+		MPMX19_01122	0.24	-1.3
1,157,011	+		MPMX19_01122	0.24	+0.4
1,157,011	+		MPMX19_01122	0.24	+0.2
1,157,011	+		MPMX19_01122	0.24	-0.9
1,157,011	+		MPMX19_01122	0.24	+0.2
1,157,011	+		MPMX19_01122	0.24	-1.0
1,157,011	+		MPMX19_01122	0.24	+1.0
1,157,011	+		MPMX19_01122	0.24	-1.3
1,157,011	+		MPMX19_01122	0.24	-0.5
1,157,011	+		MPMX19_01122	0.24	-1.2
1,157,011	+		MPMX19_01122	0.24	-0.8
1,157,012	-		MPMX19_01122	0.24	-0.6
1,157,012	-		MPMX19_01122	0.24	+0.5
1,157,012	-		MPMX19_01122	0.24	+0.6
1,157,012	-		MPMX19_01122	0.24	-0.0
1,157,012	-		MPMX19_01122	0.24	+0.4
1,157,012	-		MPMX19_01122	0.24	-0.5
1,157,012	-		MPMX19_01122	0.24	-1.6
1,157,012	-		MPMX19_01122	0.24	-1.8
1,157,012	-		MPMX19_01122	0.24	-1.4
1,157,012	-		MPMX19_01122	0.24	-0.4
1,157,012	-		MPMX19_01122	0.24	-1.6
1,157,102	-		MPMX19_01122	0.34	+1.3
1,157,102	-		MPMX19_01122	0.34	+1.5
1,157,128	+		MPMX19_01122	0.36	-0.0
1,157,128	+		MPMX19_01122	0.36	+0.5
1,157,128	+		MPMX19_01122	0.36	+0.4
1,157,128	+		MPMX19_01122	0.36	+1.1
1,157,128	+		MPMX19_01122	0.36	+2.5
1,157,128	+		MPMX19_01122	0.36	+2.5
1,157,128	+		MPMX19_01122	0.36	-0.2
1,157,128	+		MPMX19_01122	0.36	-1.7
1,157,128	+		MPMX19_01122	0.36	-1.2
1,157,128	+		MPMX19_01122	0.36	-0.1
1,157,128	+		MPMX19_01122	0.36	-0.2
1,157,129	-		MPMX19_01122	0.37	-1.5
1,157,129	-		MPMX19_01122	0.37	+0.5
1,157,129	-		MPMX19_01122	0.37	-1.0
1,157,129	-		MPMX19_01122	0.37	+0.3
1,157,129	-		MPMX19_01122	0.37	-0.6
1,157,129	-		MPMX19_01122	0.37	+0.3
1,157,129	-		MPMX19_01122	0.37	+1.3
1,157,332	+		MPMX19_01122	0.58	+0.3
1,157,332	+		MPMX19_01122	0.58	-0.6
1,157,332	+		MPMX19_01122	0.58	-0.3
1,157,332	+		MPMX19_01122	0.58	+0.2
1,157,333	-		MPMX19_01122	0.58	-1.8
1,157,479	+		MPMX19_01122	0.74	+0.1
1,157,479	+		MPMX19_01122	0.74	+2.0
1,157,479	+		MPMX19_01122	0.74	-0.6
1,157,480	-		MPMX19_01122	0.74	-1.3
1,157,480	-		MPMX19_01122	0.74	-1.6
1,157,480	-		MPMX19_01122	0.74	+0.5
1,157,480	-		MPMX19_01122	0.74	+1.0
1,157,480	-		MPMX19_01122	0.74	+0.1
1,157,823	+		MPMX19_01123	0.10	+1.2
1,157,823	+		MPMX19_01123	0.10	-1.2
1,157,823	+		MPMX19_01123	0.10	+0.4
1,157,824	-		MPMX19_01123	0.10	+0.1
1,157,824	-		MPMX19_01123	0.10	-1.5
1,157,824	-		MPMX19_01123	0.10	-1.0
1,157,824	-		MPMX19_01123	0.10	-1.0
1,157,910	+		MPMX19_01123	0.22	+0.9
1,157,910	+		MPMX19_01123	0.22	+0.1
1,157,910	+		MPMX19_01123	0.22	-0.3
1,157,911	-		MPMX19_01123	0.22	-1.0
1,157,911	-		MPMX19_01123	0.22	-0.1
1,157,984	+		MPMX19_01123	0.31	-0.5
1,157,984	+		MPMX19_01123	0.31	-0.7
1,157,984	+		MPMX19_01123	0.31	+0.9
1,157,984	+		MPMX19_01123	0.31	-0.7
1,157,984	+		MPMX19_01123	0.31	-0.9
1,157,985	-		MPMX19_01123	0.31	-0.1
1,157,985	-		MPMX19_01123	0.31	-1.2
1,157,985	-		MPMX19_01123	0.31	-0.7
1,158,132	+		MPMX19_01123	0.51	+0.0
1,158,132	+		MPMX19_01123	0.51	+1.1
1,158,132	+		MPMX19_01123	0.51	-1.1
1,158,132	+		MPMX19_01123	0.51	-1.4
1,158,132	+		MPMX19_01123	0.51	-0.2
1,158,132	+		MPMX19_01123	0.51	-0.1
1,158,132	+		MPMX19_01123	0.51	-0.2
1,158,132	+		MPMX19_01123	0.51	+0.1
1,158,132	+		MPMX19_01123	0.51	+0.3
1,158,132	+		MPMX19_01123	0.51	-1.4
1,158,132	+		MPMX19_01123	0.51	+0.2
1,158,132	+		MPMX19_01123	0.51	+0.7
1,158,133	-		MPMX19_01123	0.51	+0.4
1,158,133	-		MPMX19_01123	0.51	-1.8
1,158,133	-		MPMX19_01123	0.51	-1.8
1,158,133	-		MPMX19_01123	0.51	-0.3
1,158,133	-		MPMX19_01123	0.51	-0.7
1,158,133	-		MPMX19_01123	0.51	-2.0
1,158,133	-		MPMX19_01123	0.51	-1.1
1,158,133	-		MPMX19_01123	0.51	+0.6
1,158,133	-		MPMX19_01123	0.51	-2.5
1,158,133	-		MPMX19_01123	0.51	+0.3
1,158,133	-		MPMX19_01123	0.51	-0.7
1,158,133	-		MPMX19_01123	0.51	-1.5
1,158,133	-		MPMX19_01123	0.51	-0.5
1,158,133	-		MPMX19_01123	0.51	-0.6
1,158,133	-		MPMX19_01123	0.51	-0.1
1,158,133	-		MPMX19_01123	0.51	-1.0
1,158,133	-		MPMX19_01123	0.51	-0.2
1,158,133	-		MPMX19_01123	0.51	-0.8
1,158,133	-		MPMX19_01123	0.51	+0.3
1,158,174	+		MPMX19_01123	0.56	+0.5
1,158,174	+		MPMX19_01123	0.56	-2.0
1,158,174	+		MPMX19_01123	0.56	-1.0
1,158,175	-		MPMX19_01123	0.56	+0.0
1,158,175	-		MPMX19_01123	0.56	+0.1
1,158,175	-		MPMX19_01123	0.56	-1.0
1,158,423	+		MPMX19_01123	0.88	-1.0
1,158,423	+		MPMX19_01123	0.88	-1.0
1,158,423	+		MPMX19_01123	0.88	-0.6
1,158,423	+		MPMX19_01123	0.88	-0.2
1,158,424	-		MPMX19_01123	0.89	+0.3
1,158,424	-		MPMX19_01123	0.89	+0.0
1,158,500	+				-0.1
1,158,500	+				+1.5
1,158,500	+				-0.3
1,158,500	+				+0.5
1,158,501	-				+0.0
1,158,501	-				-2.4
1,158,501	-				-1.3
1,158,501	-				-0.1
1,158,652	-		MPMX19_01124	0.20	-2.3
1,159,010	+		MPMX19_01124	0.69	-0.1
1,159,010	+		MPMX19_01124	0.69	-0.1
1,159,010	+		MPMX19_01124	0.69	+1.7
1,159,010	+		MPMX19_01124	0.69	+0.1
1,159,010	+		MPMX19_01124	0.69	+1.1
1,159,010	+		MPMX19_01124	0.69	+0.4
1,159,010	+		MPMX19_01124	0.69	-0.1
1,159,010	+		MPMX19_01124	0.69	+0.4
1,159,010	+		MPMX19_01124	0.69	+0.3
1,159,010	+		MPMX19_01124	0.69	-0.3
1,159,010	+		MPMX19_01124	0.69	-0.4
1,159,010	+		MPMX19_01124	0.69	-0.1
1,159,010	+		MPMX19_01124	0.69	+0.1
1,159,010	+		MPMX19_01124	0.69	+1.5
1,159,010	+		MPMX19_01124	0.69	-0.6
1,159,010	+		MPMX19_01124	0.69	-0.6
1,159,010	+		MPMX19_01124	0.69	-0.6
1,159,010	+		MPMX19_01124	0.69	-1.3
1,159,011	-		MPMX19_01124	0.69	-0.6
1,159,011	-		MPMX19_01124	0.69	-0.8
1,159,011	-		MPMX19_01124	0.69	+0.3
1,159,011	-		MPMX19_01124	0.69	-1.6
1,159,011	-		MPMX19_01124	0.69	-3.2
1,159,011	-		MPMX19_01124	0.69	+0.1
1,159,011	-		MPMX19_01124	0.69	+0.0
1,159,011	-		MPMX19_01124	0.69	-1.7
1,159,011	-		MPMX19_01124	0.69	+0.2
1,159,011	-		MPMX19_01124	0.69	+0.5
1,159,011	-		MPMX19_01124	0.69	-1.5
1,159,011	-		MPMX19_01124	0.69	+0.3
1,159,011	-		MPMX19_01124	0.69	-1.1
1,159,011	-		MPMX19_01124	0.69	+0.3
1,159,011	-		MPMX19_01124	0.69	+0.5
1,159,196	+				-0.8
1,159,196	+				-2.0
1,159,196	+				+0.8
1,159,196	+				-0.7
1,159,196	+				-0.2
1,159,196	+				-1.7
1,159,196	+				+0.3
1,159,196	+				-0.6
1,159,197	-				+0.0
1,159,197	-				-1.0
1,159,197	-				+0.1
1,159,197	-				-1.4
1,159,197	-				-1.5
1,159,197	-				-0.8
1,159,197	-				-0.4
1,159,197	-				-0.3
1,159,197	-				+0.4
1,159,197	-				-1.8
1,159,309	+		MPMX19_01125	0.40	-0.8
1,159,309	+		MPMX19_01125	0.40	+0.2
1,159,310	-		MPMX19_01125	0.41	-1.8
1,159,310	-		MPMX19_01125	0.41	-0.1
1,159,400	+				+0.1
1,159,400	+				+0.5
1,159,400	+				-0.2
1,159,401	-				+0.3
1,159,401	-				-0.9
1,159,402	+				+0.0
1,159,402	+				-1.8
1,159,402	+				+0.1
1,159,402	+				+1.1
1,159,403	-				+0.4
1,159,403	-				-0.4
1,159,403	-				+0.6
1,159,403	-				+1.5
1,159,403	-				+0.4
1,159,403	-				-0.2
1,159,491	+				-0.6
1,159,491	+				-0.2
1,159,491	+				-0.1
1,159,491	+				+0.2
1,159,491	+				+0.9
1,159,492	-				+0.6
1,159,492	-				-0.1
1,159,492	-				-1.9
1,159,492	-				+0.5
1,159,492	-				+1.0
1,159,492	-				-1.1