Experiment: NL-CCM; ambient oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00981 and MPMX19_00982 are separated by 15 nucleotides MPMX19_00982 and MPMX19_00983 are separated by 39 nucleotides MPMX19_00983 and MPMX19_00984 are separated by 112 nucleotides MPMX19_00984 and MPMX19_00985 are separated by 6 nucleotides
MPMX19_00981: MPMX19_00981 - hypothetical protein, at 1,021,116 to 1,021,847
_00981
MPMX19_00982: MPMX19_00982 - Guanylate kinase, at 1,021,863 to 1,022,510
_00982
MPMX19_00983: MPMX19_00983 - hypothetical protein, at 1,022,550 to 1,023,446
_00983
MPMX19_00984: MPMX19_00984 - putative oxidoreductase, at 1,023,559 to 1,024,320
_00984
MPMX19_00985: MPMX19_00985 - hypothetical protein, at 1,024,327 to 1,025,613
_00985
Position (kb) 1022
1023
1024 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1021.671 kb on + strand, within MPMX19_00981 at 1021.672 kb on - strand, within MPMX19_00981 at 1021.672 kb on - strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.764 kb on + strand, within MPMX19_00981 at 1021.765 kb on - strand, within MPMX19_00981 at 1021.820 kb on - strand at 1021.820 kb on - strand at 1021.845 kb on + strand at 1021.845 kb on + strand at 1021.845 kb on + strand at 1021.845 kb on + strand at 1021.845 kb on + strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.850 kb on - strand at 1021.865 kb on - strand at 1021.865 kb on - strand at 1021.872 kb on - strand at 1023.377 kb on - strand at 1023.377 kb on - strand at 1023.377 kb on - strand at 1023.377 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.492 kb on - strand at 1023.492 kb on - strand at 1023.492 kb on - strand at 1023.492 kb on - strand at 1023.492 kb on - strand at 1023.492 kb on - strand at 1023.628 kb on + strand at 1023.628 kb on + strand at 1023.628 kb on + strand at 1023.628 kb on + strand at 1023.628 kb on + strand at 1023.628 kb on + strand at 1023.628 kb on + strand at 1023.628 kb on + strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1023.629 kb on - strand at 1024.012 kb on + strand, within MPMX19_00984 at 1024.012 kb on + strand, within MPMX19_00984 at 1024.012 kb on + strand, within MPMX19_00984 at 1024.012 kb on + strand, within MPMX19_00984 at 1024.013 kb on - strand, within MPMX19_00984 at 1024.013 kb on - strand, within MPMX19_00984 at 1024.013 kb on - strand, within MPMX19_00984 at 1024.013 kb on - strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.042 kb on + strand, within MPMX19_00984 at 1024.043 kb on - strand, within MPMX19_00984 at 1024.043 kb on - strand, within MPMX19_00984 at 1024.043 kb on - strand, within MPMX19_00984 at 1024.043 kb on - strand, within MPMX19_00984 at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.433 kb on + strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand at 1024.434 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; ambient oxygen remove 1,021,671 + MPMX19_00981 0.76 +1.1 1,021,672 - MPMX19_00981 0.76 -1.0 1,021,672 - MPMX19_00981 0.76 -0.0 1,021,761 + MPMX19_00981 0.88 -0.2 1,021,761 + MPMX19_00981 0.88 -2.6 1,021,761 + MPMX19_00981 0.88 +1.3 1,021,761 + MPMX19_00981 0.88 +1.5 1,021,761 + MPMX19_00981 0.88 -3.0 1,021,761 + MPMX19_00981 0.88 +0.6 1,021,761 + MPMX19_00981 0.88 -0.6 1,021,761 + MPMX19_00981 0.88 -1.8 1,021,761 + MPMX19_00981 0.88 -0.1 1,021,761 + MPMX19_00981 0.88 -0.5 1,021,761 + MPMX19_00981 0.88 -1.0 1,021,761 + MPMX19_00981 0.88 +0.7 1,021,762 - MPMX19_00981 0.88 +0.4 1,021,762 - MPMX19_00981 0.88 +0.8 1,021,762 - MPMX19_00981 0.88 +0.3 1,021,762 - MPMX19_00981 0.88 -0.1 1,021,762 - MPMX19_00981 0.88 +0.9 1,021,762 - MPMX19_00981 0.88 -0.8 1,021,762 - MPMX19_00981 0.88 +1.0 1,021,762 - MPMX19_00981 0.88 -1.0 1,021,762 - MPMX19_00981 0.88 -1.3 1,021,762 - MPMX19_00981 0.88 -0.6 1,021,762 - MPMX19_00981 0.88 +0.0 1,021,764 + MPMX19_00981 0.89 -0.5 1,021,765 - MPMX19_00981 0.89 -0.1 1,021,820 - -0.3 1,021,820 - +0.2 1,021,845 + -0.5 1,021,845 + -0.7 1,021,845 + -0.8 1,021,845 + -0.5 1,021,845 + +0.5 1,021,846 - +0.1 1,021,846 - +0.0 1,021,846 - +0.5 1,021,846 - +0.8 1,021,846 - -1.1 1,021,846 - -1.4 1,021,846 - -0.4 1,021,846 - +0.7 1,021,846 - -0.6 1,021,846 - +0.3 1,021,850 - +0.4 1,021,865 - -1.7 1,021,865 - -1.0 1,021,872 - -0.1 1,023,377 - -1.6 1,023,377 - -0.7 1,023,377 - -0.5 1,023,377 - +0.4 1,023,490 - -1.2 1,023,490 - -0.8 1,023,490 - -1.1 1,023,490 - -0.0 1,023,490 - +0.4 1,023,490 - -0.6 1,023,490 - -1.1 1,023,490 - +0.5 1,023,490 - +0.0 1,023,492 - -0.2 1,023,492 - -0.2 1,023,492 - +0.0 1,023,492 - +0.3 1,023,492 - +0.2 1,023,492 - -0.8 1,023,628 + -0.1 1,023,628 + -0.8 1,023,628 + +0.1 1,023,628 + +1.5 1,023,628 + +1.1 1,023,628 + -3.0 1,023,628 + -0.2 1,023,628 + +1.5 1,023,629 - +0.2 1,023,629 - +0.7 1,023,629 - -1.1 1,023,629 - -0.9 1,023,629 - -0.4 1,023,629 - +0.3 1,023,629 - +0.4 1,023,629 - +0.4 1,023,629 - -0.8 1,023,629 - -0.3 1,023,629 - -2.0 1,023,629 - -0.8 1,023,629 - +1.2 1,024,012 + MPMX19_00984 0.59 +0.1 1,024,012 + MPMX19_00984 0.59 +0.2 1,024,012 + MPMX19_00984 0.59 -0.4 1,024,012 + MPMX19_00984 0.59 -0.4 1,024,013 - MPMX19_00984 0.60 +0.9 1,024,013 - MPMX19_00984 0.60 -2.0 1,024,013 - MPMX19_00984 0.60 +0.0 1,024,013 - MPMX19_00984 0.60 -0.6 1,024,042 + MPMX19_00984 0.63 -0.6 1,024,042 + MPMX19_00984 0.63 -0.5 1,024,042 + MPMX19_00984 0.63 -0.5 1,024,042 + MPMX19_00984 0.63 -0.1 1,024,042 + MPMX19_00984 0.63 -0.8 1,024,042 + MPMX19_00984 0.63 +0.5 1,024,042 + MPMX19_00984 0.63 +0.2 1,024,042 + MPMX19_00984 0.63 -0.5 1,024,042 + MPMX19_00984 0.63 -0.4 1,024,042 + MPMX19_00984 0.63 -0.0 1,024,042 + MPMX19_00984 0.63 -0.1 1,024,043 - MPMX19_00984 0.64 -0.8 1,024,043 - MPMX19_00984 0.64 -0.4 1,024,043 - MPMX19_00984 0.64 -1.0 1,024,043 - MPMX19_00984 0.64 -0.7 1,024,433 + -0.5 1,024,433 + +0.2 1,024,433 + +1.5 1,024,433 + -2.4 1,024,433 + -0.6 1,024,433 + -0.8 1,024,433 + +0.5 1,024,433 + +1.1 1,024,433 + -0.3 1,024,433 + +0.5 1,024,433 + +1.3 1,024,433 + -0.3 1,024,433 + -0.1 1,024,433 + +0.8 1,024,433 + +1.1 1,024,433 + +1.6 1,024,433 + -0.8 1,024,433 + -0.8 1,024,433 + -1.3 1,024,433 + -1.1 1,024,434 - +0.8 1,024,434 - +0.9 1,024,434 - -0.3 1,024,434 - -1.3 1,024,434 - -0.8 1,024,434 - -1.3 1,024,434 - -0.4 1,024,434 - -0.3 1,024,434 - +0.2 1,024,434 - -0.3 1,024,434 - -0.4 1,024,434 - +1.9 1,024,434 - -1.4 1,024,434 - +1.5 1,024,434 - -0.3 1,024,434 - -2.2 1,024,434 - +0.5 1,024,434 - +0.7 1,024,434 - +0.8 1,024,434 - +0.8 1,024,434 - -0.5
Or see this region's nucleotide sequence