Experiment: NL-CCM; ambient oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00027 and MPMX19_00028 are separated by 274 nucleotides MPMX19_00028 and MPMX19_00029 are separated by 62 nucleotides MPMX19_00029 and MPMX19_00030 are separated by 56 nucleotides
MPMX19_00027: MPMX19_00027 - hypothetical protein, at 32,347 to 33,561
_00027
MPMX19_00028: MPMX19_00028 - hypothetical protein, at 33,836 to 34,153
_00028
MPMX19_00029: MPMX19_00029 - Phosphoglycolate phosphatase, at 34,216 to 35,094
_00029
MPMX19_00030: MPMX19_00030 - D-inositol-3-phosphate glycosyltransferase, at 35,151 to 36,401
_00030
Position (kb) 33
34
35 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 33.103 kb on + strand, within MPMX19_00027 at 33.103 kb on + strand, within MPMX19_00027 at 33.103 kb on + strand, within MPMX19_00027 at 33.103 kb on + strand, within MPMX19_00027 at 33.103 kb on + strand, within MPMX19_00027 at 33.103 kb on + strand, within MPMX19_00027 at 33.104 kb on - strand, within MPMX19_00027 at 33.104 kb on - strand, within MPMX19_00027 at 33.104 kb on - strand, within MPMX19_00027 at 33.104 kb on - strand, within MPMX19_00027 at 33.104 kb on - strand, within MPMX19_00027 at 33.221 kb on + strand, within MPMX19_00027 at 33.221 kb on + strand, within MPMX19_00027 at 33.221 kb on + strand, within MPMX19_00027 at 33.221 kb on + strand, within MPMX19_00027 at 33.222 kb on - strand, within MPMX19_00027 at 33.222 kb on - strand, within MPMX19_00027 at 33.222 kb on - strand, within MPMX19_00027 at 33.222 kb on - strand, within MPMX19_00027 at 33.222 kb on - strand, within MPMX19_00027 at 33.222 kb on - strand, within MPMX19_00027 at 33.222 kb on - strand, within MPMX19_00027 at 33.222 kb on - strand, within MPMX19_00027 at 33.358 kb on - strand, within MPMX19_00027 at 33.358 kb on - strand, within MPMX19_00027 at 33.358 kb on - strand, within MPMX19_00027 at 33.358 kb on - strand, within MPMX19_00027 at 33.614 kb on + strand at 33.614 kb on + strand at 33.614 kb on + strand at 33.615 kb on - strand at 33.615 kb on - strand at 33.615 kb on - strand at 33.615 kb on - strand at 33.615 kb on - strand at 33.615 kb on - strand at 33.615 kb on - strand at 33.615 kb on - strand at 33.615 kb on - strand at 33.615 kb on - strand at 33.615 kb on - strand at 33.615 kb on - strand at 33.615 kb on - strand at 33.615 kb on - strand at 33.615 kb on - strand at 33.615 kb on - strand at 33.616 kb on + strand at 33.617 kb on - strand at 33.617 kb on - strand at 33.617 kb on - strand at 33.617 kb on - strand at 33.617 kb on - strand at 33.617 kb on - strand at 33.617 kb on - strand at 33.617 kb on - strand at 33.760 kb on + strand at 33.761 kb on - strand at 33.761 kb on - strand at 33.761 kb on - strand at 33.761 kb on - strand at 33.761 kb on - strand at 33.761 kb on - strand at 33.761 kb on - strand at 33.780 kb on + strand at 33.780 kb on + strand at 33.780 kb on + strand at 33.780 kb on + strand at 33.780 kb on + strand at 33.780 kb on + strand at 33.780 kb on + strand at 33.780 kb on + strand at 33.780 kb on + strand at 33.780 kb on + strand at 33.781 kb on - strand at 33.781 kb on - strand at 33.781 kb on - strand at 33.781 kb on - strand at 33.781 kb on - strand at 33.856 kb on + strand at 33.856 kb on + strand at 33.856 kb on + strand at 33.856 kb on + strand at 33.857 kb on - strand at 33.857 kb on - strand at 33.857 kb on - strand at 33.857 kb on - strand at 33.915 kb on + strand, within MPMX19_00028 at 33.915 kb on + strand, within MPMX19_00028 at 33.916 kb on - strand, within MPMX19_00028 at 33.916 kb on - strand, within MPMX19_00028 at 33.929 kb on + strand, within MPMX19_00028 at 33.929 kb on + strand, within MPMX19_00028 at 33.929 kb on + strand, within MPMX19_00028 at 33.930 kb on - strand, within MPMX19_00028 at 33.930 kb on - strand, within MPMX19_00028 at 33.930 kb on - strand, within MPMX19_00028 at 33.930 kb on - strand, within MPMX19_00028 at 33.930 kb on - strand, within MPMX19_00028 at 33.930 kb on - strand, within MPMX19_00028 at 33.930 kb on - strand, within MPMX19_00028 at 33.931 kb on + strand, within MPMX19_00028 at 33.931 kb on + strand, within MPMX19_00028 at 33.931 kb on + strand, within MPMX19_00028 at 33.931 kb on + strand, within MPMX19_00028 at 33.931 kb on + strand, within MPMX19_00028 at 33.931 kb on + strand, within MPMX19_00028 at 33.931 kb on + strand, within MPMX19_00028 at 33.932 kb on - strand, within MPMX19_00028 at 33.932 kb on - strand, within MPMX19_00028 at 33.932 kb on - strand, within MPMX19_00028 at 33.932 kb on - strand, within MPMX19_00028 at 33.932 kb on - strand, within MPMX19_00028 at 34.058 kb on + strand, within MPMX19_00028 at 34.058 kb on + strand, within MPMX19_00028 at 34.058 kb on + strand, within MPMX19_00028 at 34.058 kb on + strand, within MPMX19_00028 at 34.058 kb on + strand, within MPMX19_00028 at 34.058 kb on + strand, within MPMX19_00028 at 34.058 kb on + strand, within MPMX19_00028 at 34.058 kb on + strand, within MPMX19_00028 at 34.058 kb on + strand, within MPMX19_00028 at 34.058 kb on + strand, within MPMX19_00028 at 34.058 kb on + strand, within MPMX19_00028 at 34.059 kb on - strand, within MPMX19_00028 at 34.059 kb on - strand, within MPMX19_00028 at 34.059 kb on - strand, within MPMX19_00028 at 34.059 kb on - strand, within MPMX19_00028 at 34.059 kb on - strand, within MPMX19_00028 at 34.059 kb on - strand, within MPMX19_00028 at 34.059 kb on - strand, within MPMX19_00028 at 34.061 kb on + strand, within MPMX19_00028 at 34.164 kb on + strand at 34.164 kb on + strand at 34.164 kb on + strand at 34.164 kb on + strand at 34.164 kb on + strand at 34.165 kb on - strand at 34.165 kb on - strand at 34.165 kb on - strand at 34.165 kb on - strand at 34.165 kb on - strand at 34.165 kb on - strand at 34.165 kb on - strand at 34.165 kb on - strand at 34.165 kb on - strand at 34.166 kb on + strand at 34.167 kb on - strand at 34.194 kb on + strand at 34.194 kb on + strand at 34.194 kb on + strand at 34.195 kb on - strand at 34.195 kb on - strand at 34.195 kb on - strand at 34.195 kb on - strand at 34.195 kb on - strand at 34.195 kb on - strand at 34.195 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; ambient oxygen remove 33,103 + MPMX19_00027 0.62 -2.6 33,103 + MPMX19_00027 0.62 -1.5 33,103 + MPMX19_00027 0.62 +0.6 33,103 + MPMX19_00027 0.62 -2.0 33,103 + MPMX19_00027 0.62 -0.7 33,103 + MPMX19_00027 0.62 -1.7 33,104 - MPMX19_00027 0.62 -0.4 33,104 - MPMX19_00027 0.62 +0.4 33,104 - MPMX19_00027 0.62 +0.1 33,104 - MPMX19_00027 0.62 -0.3 33,104 - MPMX19_00027 0.62 +0.7 33,221 + MPMX19_00027 0.72 +0.4 33,221 + MPMX19_00027 0.72 -1.3 33,221 + MPMX19_00027 0.72 -0.4 33,221 + MPMX19_00027 0.72 +1.0 33,222 - MPMX19_00027 0.72 -0.2 33,222 - MPMX19_00027 0.72 -0.4 33,222 - MPMX19_00027 0.72 +0.4 33,222 - MPMX19_00027 0.72 -2.1 33,222 - MPMX19_00027 0.72 -0.1 33,222 - MPMX19_00027 0.72 +1.3 33,222 - MPMX19_00027 0.72 -0.9 33,222 - MPMX19_00027 0.72 +0.3 33,358 - MPMX19_00027 0.83 -0.5 33,358 - MPMX19_00027 0.83 -0.7 33,358 - MPMX19_00027 0.83 -1.2 33,358 - MPMX19_00027 0.83 -0.2 33,614 + -1.6 33,614 + -0.8 33,614 + -1.6 33,615 - +2.0 33,615 - +0.8 33,615 - +0.7 33,615 - -0.6 33,615 - -0.1 33,615 - +0.0 33,615 - +0.1 33,615 - -0.2 33,615 - -0.9 33,615 - -1.2 33,615 - +0.7 33,615 - -0.1 33,615 - -0.2 33,615 - -0.4 33,615 - +0.3 33,615 - -2.0 33,616 + +0.2 33,617 - -0.7 33,617 - +0.4 33,617 - -1.5 33,617 - -1.4 33,617 - -1.3 33,617 - -0.5 33,617 - -0.4 33,617 - -2.6 33,760 + -0.4 33,761 - -0.6 33,761 - -0.7 33,761 - -0.4 33,761 - +1.0 33,761 - -2.6 33,761 - -1.3 33,761 - +0.4 33,780 + +0.1 33,780 + -1.0 33,780 + -2.2 33,780 + +0.1 33,780 + -0.7 33,780 + +1.2 33,780 + +1.3 33,780 + -2.7 33,780 + -2.0 33,780 + -0.1 33,781 - -1.1 33,781 - +1.9 33,781 - -1.1 33,781 - +0.0 33,781 - +1.6 33,856 + +0.6 33,856 + -0.3 33,856 + +0.9 33,856 + +1.0 33,857 - +0.9 33,857 - +1.0 33,857 - +0.8 33,857 - -1.4 33,915 + MPMX19_00028 0.25 +0.2 33,915 + MPMX19_00028 0.25 -0.7 33,916 - MPMX19_00028 0.25 +0.1 33,916 - MPMX19_00028 0.25 -0.1 33,929 + MPMX19_00028 0.29 -0.1 33,929 + MPMX19_00028 0.29 +0.6 33,929 + MPMX19_00028 0.29 -1.1 33,930 - MPMX19_00028 0.30 -1.5 33,930 - MPMX19_00028 0.30 -0.5 33,930 - MPMX19_00028 0.30 -1.0 33,930 - MPMX19_00028 0.30 +0.1 33,930 - MPMX19_00028 0.30 +0.1 33,930 - MPMX19_00028 0.30 +0.9 33,930 - MPMX19_00028 0.30 +0.4 33,931 + MPMX19_00028 0.30 -0.7 33,931 + MPMX19_00028 0.30 +0.4 33,931 + MPMX19_00028 0.30 -3.0 33,931 + MPMX19_00028 0.30 -0.1 33,931 + MPMX19_00028 0.30 -1.1 33,931 + MPMX19_00028 0.30 -1.6 33,931 + MPMX19_00028 0.30 -1.9 33,932 - MPMX19_00028 0.30 +1.4 33,932 - MPMX19_00028 0.30 -1.7 33,932 - MPMX19_00028 0.30 -0.1 33,932 - MPMX19_00028 0.30 -0.9 33,932 - MPMX19_00028 0.30 -1.6 34,058 + MPMX19_00028 0.70 +0.1 34,058 + MPMX19_00028 0.70 -1.4 34,058 + MPMX19_00028 0.70 -0.6 34,058 + MPMX19_00028 0.70 +0.3 34,058 + MPMX19_00028 0.70 -0.0 34,058 + MPMX19_00028 0.70 -1.1 34,058 + MPMX19_00028 0.70 +0.5 34,058 + MPMX19_00028 0.70 -1.9 34,058 + MPMX19_00028 0.70 +0.1 34,058 + MPMX19_00028 0.70 -0.3 34,058 + MPMX19_00028 0.70 -0.4 34,059 - MPMX19_00028 0.70 -1.0 34,059 - MPMX19_00028 0.70 +1.6 34,059 - MPMX19_00028 0.70 -1.6 34,059 - MPMX19_00028 0.70 -0.3 34,059 - MPMX19_00028 0.70 -1.6 34,059 - MPMX19_00028 0.70 -0.5 34,059 - MPMX19_00028 0.70 -0.4 34,061 + MPMX19_00028 0.71 -0.7 34,164 + -0.6 34,164 + -0.7 34,164 + +0.5 34,164 + -0.6 34,164 + -0.6 34,165 - +0.3 34,165 - +1.1 34,165 - +0.0 34,165 - +0.4 34,165 - +0.8 34,165 - -1.9 34,165 - -0.9 34,165 - +0.5 34,165 - +0.3 34,166 + -1.1 34,167 - -2.1 34,194 + +0.7 34,194 + -1.2 34,194 + -0.1 34,195 - -1.0 34,195 - +0.2 34,195 - +0.0 34,195 - +0.0 34,195 - +0.6 34,195 - +0.3 34,195 - -0.4
Or see this region's nucleotide sequence