Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05965

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
113,483	+		MPMX19_05964	0.23	+0.3
113,483	+		MPMX19_05964	0.23	-0.9
113,483	+		MPMX19_05964	0.23	-0.3
113,483	+		MPMX19_05964	0.23	-1.1
113,483	+		MPMX19_05964	0.23	-0.4
113,483	+		MPMX19_05964	0.23	-1.6
113,483	+		MPMX19_05964	0.23	-0.3
113,483	+		MPMX19_05964	0.23	+0.7
113,483	+		MPMX19_05964	0.23	-0.0
113,483	+		MPMX19_05964	0.23	-0.3
113,483	+		MPMX19_05964	0.23	+0.0
113,483	+		MPMX19_05964	0.23	-0.2
113,483	+		MPMX19_05964	0.23	-2.2
113,483	+		MPMX19_05964	0.23	+0.2
113,484	-		MPMX19_05964	0.23	+0.9
113,484	-		MPMX19_05964	0.23	-0.1
113,484	-		MPMX19_05964	0.23	-0.5
113,484	-		MPMX19_05964	0.23	-0.7
113,484	-		MPMX19_05964	0.23	-1.3
113,484	-		MPMX19_05964	0.23	-0.1
113,484	-		MPMX19_05964	0.23	+0.3
113,484	-		MPMX19_05964	0.23	-1.6
113,484	-		MPMX19_05964	0.23	-1.3
113,484	-		MPMX19_05964	0.23	-0.7
113,484	-		MPMX19_05964	0.23	-0.2
113,528	+		MPMX19_05964	0.27	-1.6
113,528	+		MPMX19_05964	0.27	+1.0
113,528	+		MPMX19_05964	0.27	-1.9
113,529	-		MPMX19_05964	0.27	-1.2
113,603	+		MPMX19_05964	0.34	-0.7
113,604	-		MPMX19_05964	0.34	-1.2
113,711	+		MPMX19_05964	0.44	-0.7
113,895	+		MPMX19_05964	0.61	-0.6
113,895	+		MPMX19_05964	0.61	+0.7
113,895	+		MPMX19_05964	0.61	-0.8
113,895	+		MPMX19_05964	0.61	+0.0
113,896	-		MPMX19_05964	0.61	-1.7
113,896	-		MPMX19_05964	0.61	-0.5
113,896	-		MPMX19_05964	0.61	+1.0
113,896	-		MPMX19_05964	0.61	+0.2
113,896	-		MPMX19_05964	0.61	-1.1
113,897	+		MPMX19_05964	0.61	-0.3
113,897	+		MPMX19_05964	0.61	+0.1
113,897	+		MPMX19_05964	0.61	+0.7
113,897	+		MPMX19_05964	0.61	+0.8
113,898	-		MPMX19_05964	0.61	-0.6
113,898	-		MPMX19_05964	0.61	-1.4
113,993	+		MPMX19_05964	0.70	-0.5
113,993	+		MPMX19_05964	0.70	-0.1
113,993	+		MPMX19_05964	0.70	-0.5
113,994	-		MPMX19_05964	0.70	-0.4
113,994	-		MPMX19_05964	0.70	+0.2
113,994	-		MPMX19_05964	0.70	-1.2
113,994	-		MPMX19_05964	0.70	-0.6
114,062	+		MPMX19_05964	0.77	-1.2
114,062	+		MPMX19_05964	0.77	-0.2
114,062	+		MPMX19_05964	0.77	-1.5
114,062	+		MPMX19_05964	0.77	-1.6
114,062	+		MPMX19_05964	0.77	-0.1
114,062	+		MPMX19_05964	0.77	-0.9
114,062	+		MPMX19_05964	0.77	+0.5
114,062	+		MPMX19_05964	0.77	-1.1
114,062	+		MPMX19_05964	0.77	-1.1
114,062	+		MPMX19_05964	0.77	-2.2
114,062	+		MPMX19_05964	0.77	-0.9
114,062	+		MPMX19_05964	0.77	-1.9
114,063	-		MPMX19_05964	0.77	-0.9
114,063	-		MPMX19_05964	0.77	-0.9
114,063	-		MPMX19_05964	0.77	-0.3
114,063	-		MPMX19_05964	0.77	-0.3
114,063	-		MPMX19_05964	0.77	-0.8
114,063	-		MPMX19_05964	0.77	-0.3
114,063	-		MPMX19_05964	0.77	-2.0
114,063	-		MPMX19_05964	0.77	-0.4
114,063	-		MPMX19_05964	0.77	+2.4
114,063	-		MPMX19_05964	0.77	-1.9
114,063	-		MPMX19_05964	0.77	+0.4
114,063	-		MPMX19_05964	0.77	-0.0
114,063	-		MPMX19_05964	0.77	-1.9
114,063	-		MPMX19_05964	0.77	-0.7
114,063	-		MPMX19_05964	0.77	+1.0
114,063	-		MPMX19_05964	0.77	-1.2
114,306	+				+0.7
114,306	+				-0.7
114,306	+				-0.4
114,306	+				-0.7
114,306	+				+0.0
114,306	+				+0.1
114,306	+				-2.5
114,306	+				-0.5
114,306	+				-1.1
114,306	+				+0.7
114,306	+				-1.0
114,306	+				-0.1
114,306	+				-0.1
114,306	+				+0.7
114,306	+				-1.6
114,306	+				+0.3
114,306	+				-1.9
114,306	+				-0.1
114,306	+				-1.0
114,306	+				-0.4
114,306	+				-2.5
114,307	+				-0.8
114,307	-				+0.4
114,307	-				-1.0
114,307	-				-0.7
114,307	-				+0.7
114,307	-				-1.1
114,307	-				+0.1
114,307	-				-1.3
114,307	-				-1.0
114,307	-				-0.6
114,307	-				-0.2
114,307	-				-0.3
114,307	-				+0.8
114,307	-				-0.6
114,307	-				-2.1
114,307	-				+0.1
114,307	-				+0.1
114,307	-				+0.5
114,454	+				-1.1
114,454	+				+0.7
114,455	-				-1.6
114,706	+		MPMX19_05965	0.31	+0.3
114,706	+		MPMX19_05965	0.31	-1.3
114,706	+		MPMX19_05965	0.31	-1.5
114,707	-		MPMX19_05965	0.31	-1.2
114,707	-		MPMX19_05965	0.31	+0.8
114,769	+		MPMX19_05965	0.39	+1.7
114,769	+		MPMX19_05965	0.39	-1.1
114,769	+		MPMX19_05965	0.39	-1.5
114,769	+		MPMX19_05965	0.39	+0.9
114,770	-		MPMX19_05965	0.39	-0.6
114,770	-		MPMX19_05965	0.39	-0.4
115,057	+		MPMX19_05965	0.74	-1.4
115,057	+		MPMX19_05965	0.74	-0.9
115,057	+		MPMX19_05965	0.74	-1.1
115,057	+		MPMX19_05965	0.74	-0.3
115,057	+		MPMX19_05965	0.74	-0.6
115,058	-		MPMX19_05965	0.74	-0.7
115,058	-		MPMX19_05965	0.74	+0.8
115,058	-		MPMX19_05965	0.74	-0.6
115,058	-		MPMX19_05965	0.74	+0.5
115,376	+				-0.5
115,376	+				-0.9
115,377	-				-0.3
115,433	+				-0.2
115,434	+				-0.3
115,434	+				+0.5
115,434	+				+0.4
115,434	+				-0.1
115,434	+				-0.1
115,434	+				+0.4
115,434	+				-1.5
115,434	+				-1.1
115,434	+				-0.2
115,434	+				+0.1
115,434	+				+0.5
115,434	+				-0.2
115,434	+				+0.5
115,434	+				+1.9
115,434	+				-1.0
115,434	+				+0.7
115,435	-				-1.7
115,435	-				+1.7
115,435	-				-0.2
115,435	-				-1.6
115,435	-				-0.4
115,435	-				-0.4
115,435	-				+1.3
115,435	-				-0.1
115,435	-				-2.1
115,435	-				+0.3
115,563	+				+0.3
115,574	+				-0.6
115,574	+				-2.0
115,574	+				-0.1
115,575	-				-1.5
115,575	-				-1.3
115,575	-				+1.7
115,575	-				+0.3
115,575	-				+0.0
115,585	+				-1.2
115,585	+				+0.6
115,585	+				-0.6
115,585	+				-1.6
115,585	+				-0.2
115,585	+				-2.5
115,585	+				-1.4
115,586	-				-0.2
115,586	-				-1.2
115,587	+				-0.1
115,587	+				-0.9
115,587	+				-0.8
115,588	-				+0.4
115,588	-				+0.1