Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03680

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
1,117,447	+		MPMX19_03678	0.83	+0.6
1,117,448	-		MPMX19_03678	0.83	-0.2
1,117,448	-		MPMX19_03678	0.83	+0.3
1,117,459	+		MPMX19_03678	0.84	-0.1
1,117,459	+		MPMX19_03678	0.84	+1.0
1,117,459	+		MPMX19_03678	0.84	-1.0
1,117,460	-		MPMX19_03678	0.84	-1.0
1,117,555	+		MPMX19_03678	0.90	+1.6
1,117,555	+		MPMX19_03678	0.90	-0.1
1,117,555	+		MPMX19_03678	0.90	-0.8
1,117,555	+		MPMX19_03678	0.90	-2.1
1,117,556	-		MPMX19_03678	0.90	-0.1
1,117,556	-		MPMX19_03678	0.90	+0.3
1,117,556	-		MPMX19_03678	0.90	-0.4
1,117,740	+				-0.0
1,117,740	+				-0.7
1,117,740	+				+0.6
1,117,741	-				+2.0
1,117,741	-				-1.5
1,117,741	-				-0.8
1,117,741	-				-1.0
1,117,741	-				-0.1
1,117,741	-				-1.8
1,118,507	+				-0.4
1,118,630	+		MPMX19_03680	0.16	-0.1
1,118,771	-		MPMX19_03680	0.28	+0.0
1,118,908	+		MPMX19_03680	0.40	-0.9
1,118,908	+		MPMX19_03680	0.40	-1.5
1,118,908	+		MPMX19_03680	0.40	-0.6
1,118,908	+		MPMX19_03680	0.40	-1.4
1,118,908	+		MPMX19_03680	0.40	-1.0
1,118,908	+		MPMX19_03680	0.40	-1.1
1,118,908	+		MPMX19_03680	0.40	-0.1
1,118,908	+		MPMX19_03680	0.40	-1.5
1,118,908	+		MPMX19_03680	0.40	-1.2
1,118,908	+		MPMX19_03680	0.40	-1.8
1,118,908	+		MPMX19_03680	0.40	+0.0
1,118,909	-		MPMX19_03680	0.40	-1.3
1,118,909	-		MPMX19_03680	0.40	-0.5
1,118,909	-		MPMX19_03680	0.40	+1.6
1,118,909	-		MPMX19_03680	0.40	-0.3
1,118,909	-		MPMX19_03680	0.40	-0.4
1,118,909	-		MPMX19_03680	0.40	-0.5
1,118,909	-		MPMX19_03680	0.40	-1.5
1,118,909	-		MPMX19_03680	0.40	+0.3
1,118,909	-		MPMX19_03680	0.40	+0.2
1,118,909	-		MPMX19_03680	0.40	-2.0
1,118,909	-		MPMX19_03680	0.40	-1.4
1,118,909	-		MPMX19_03680	0.40	-2.1
1,118,909	-		MPMX19_03680	0.40	-1.1
1,119,124	+		MPMX19_03680	0.59	+0.4
1,119,124	+		MPMX19_03680	0.59	-1.0
1,119,124	+		MPMX19_03680	0.59	-0.4
1,119,124	+		MPMX19_03680	0.59	+0.0
1,119,217	+		MPMX19_03680	0.67	-0.3
1,119,217	+		MPMX19_03680	0.67	+0.1
1,119,217	+		MPMX19_03680	0.67	-0.1
1,119,217	+		MPMX19_03680	0.67	-0.4
1,119,218	-		MPMX19_03680	0.67	+0.2
1,119,218	-		MPMX19_03680	0.67	+0.2
1,119,218	-		MPMX19_03680	0.67	-0.9
1,119,218	-		MPMX19_03680	0.67	-0.7
1,119,218	-		MPMX19_03680	0.67	-1.2
1,119,313	+		MPMX19_03680	0.75	-0.3
1,119,313	+		MPMX19_03680	0.75	+0.1
1,119,313	+		MPMX19_03680	0.75	+0.1
1,119,313	+		MPMX19_03680	0.75	-0.5
1,119,313	+		MPMX19_03680	0.75	+0.5
1,119,313	+		MPMX19_03680	0.75	+0.6
1,119,313	+		MPMX19_03680	0.75	-0.5
1,119,313	+		MPMX19_03680	0.75	+0.3
1,119,313	+		MPMX19_03680	0.75	-0.3
1,119,313	+		MPMX19_03680	0.75	+0.5
1,119,313	+		MPMX19_03680	0.75	+2.5
1,119,314	-		MPMX19_03680	0.75	-1.5
1,119,314	-		MPMX19_03680	0.75	-0.7
1,119,314	-		MPMX19_03680	0.75	-0.4
1,119,314	-		MPMX19_03680	0.75	-1.9
1,119,320	+		MPMX19_03680	0.76	-0.6
1,119,320	+		MPMX19_03680	0.76	-1.8
1,119,365	+		MPMX19_03680	0.80	+1.0
1,119,365	+		MPMX19_03680	0.80	+0.6
1,119,365	+		MPMX19_03680	0.80	+0.6
1,119,365	+		MPMX19_03680	0.80	-0.1
1,119,366	-		MPMX19_03680	0.80	+0.2
1,119,366	-		MPMX19_03680	0.80	+1.6
1,119,367	+		MPMX19_03680	0.80	+0.6
1,119,367	+		MPMX19_03680	0.80	+1.6
1,119,367	+		MPMX19_03680	0.80	-1.5
1,119,367	+		MPMX19_03680	0.80	+0.9
1,119,367	+		MPMX19_03680	0.80	-0.3
1,119,368	-		MPMX19_03680	0.80	+0.2
1,119,368	-		MPMX19_03680	0.80	-0.3
1,119,433	+		MPMX19_03680	0.86	-1.8
1,119,433	+		MPMX19_03680	0.86	-0.4
1,119,433	+		MPMX19_03680	0.86	+0.6
1,119,433	+		MPMX19_03680	0.86	-1.2
1,119,433	+		MPMX19_03680	0.86	+1.0
1,119,433	+		MPMX19_03680	0.86	-0.9
1,119,433	+		MPMX19_03680	0.86	-1.8
1,119,433	+		MPMX19_03680	0.86	-0.3
1,119,433	+		MPMX19_03680	0.86	+2.2
1,119,433	+		MPMX19_03680	0.86	-0.3
1,119,434	-		MPMX19_03680	0.86	-0.3
1,119,434	-		MPMX19_03680	0.86	-0.5
1,119,434	-		MPMX19_03680	0.86	-0.1
1,119,434	-		MPMX19_03680	0.86	-0.4
1,119,434	-		MPMX19_03680	0.86	-0.1
1,119,434	-		MPMX19_03680	0.86	-0.3
1,119,434	-		MPMX19_03680	0.86	-0.2
1,119,434	-		MPMX19_03680	0.86	-0.8
1,119,434	-		MPMX19_03680	0.86	+1.2
1,119,645	+				-1.2
1,119,645	+				-1.2
1,119,645	+				+0.3
1,119,645	+				-0.8
1,119,645	+				-1.8
1,119,645	+				-0.2
1,119,645	+				+0.4
1,119,645	+				-1.3
1,119,645	+				+0.6
1,119,645	+				-0.5
1,119,645	+				-1.7
1,119,645	+				-0.3
1,119,645	+				-1.8
1,119,645	+				-1.2
1,119,645	+				-2.8
1,119,645	+				+0.3
1,119,645	+				+0.4
1,119,645	+				-1.0
1,119,645	+				+0.6
1,119,645	+				+0.8
1,119,645	+				-2.2
1,119,645	+				+0.7
1,119,645	+				-2.4
1,119,645	+				-1.3
1,119,645	+				-0.4
1,119,645	+				-0.2
1,119,645	+				+0.3
1,119,645	+				+0.5
1,119,645	+				-1.2
1,119,646	-				-1.8
1,119,646	-				-0.1
1,119,646	-				+0.0
1,119,646	-				-0.1
1,119,646	-				+0.0
1,119,646	-				+0.4
1,119,646	-				+0.4
1,119,646	-				-0.0
1,119,646	-				-1.1
1,119,646	-				-0.4
1,119,646	-				+0.1
1,119,646	-				-1.2
1,119,646	-				-1.4
1,119,646	-				+0.8
1,119,646	-				-0.4
1,119,646	-				+0.5
1,119,646	-				+2.6
1,120,173	+		MPMX19_03681	0.27	+0.9
1,120,173	+		MPMX19_03681	0.27	-0.3
1,120,173	+		MPMX19_03681	0.27	-0.1
1,120,173	+		MPMX19_03681	0.27	+2.6
1,120,173	+		MPMX19_03681	0.27	-0.5
1,120,173	+		MPMX19_03681	0.27	-0.6
1,120,173	+		MPMX19_03681	0.27	-0.7
1,120,173	+		MPMX19_03681	0.27	+0.4
1,120,174	-		MPMX19_03681	0.27	-0.9
1,120,174	-		MPMX19_03681	0.27	-2.8
1,120,174	-		MPMX19_03681	0.27	-0.5
1,120,174	-		MPMX19_03681	0.27	-0.7
1,120,174	-		MPMX19_03681	0.27	+0.6
1,120,174	-		MPMX19_03681	0.27	-0.3
1,120,174	-		MPMX19_03681	0.27	+0.3
1,120,174	-		MPMX19_03681	0.27	-1.9
1,120,242	+		MPMX19_03681	0.31	-0.3
1,120,242	+		MPMX19_03681	0.31	+0.5
1,120,242	+		MPMX19_03681	0.31	-0.9
1,120,242	+		MPMX19_03681	0.31	+0.6
1,120,242	+		MPMX19_03681	0.31	+0.4
1,120,242	+		MPMX19_03681	0.31	+0.3
1,120,243	-		MPMX19_03681	0.32	-0.3
1,120,243	-		MPMX19_03681	0.32	-0.2
1,120,243	-		MPMX19_03681	0.32	+1.6
1,120,243	-		MPMX19_03681	0.32	+0.2
1,120,243	-		MPMX19_03681	0.32	-0.4
1,120,243	-		MPMX19_03681	0.32	+0.2
1,120,243	-		MPMX19_03681	0.32	+1.6
1,120,243	-		MPMX19_03681	0.32	-1.0
1,120,251	+		MPMX19_03681	0.32	-1.5
1,120,252	-		MPMX19_03681	0.32	-2.0