Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01117

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
1,151,631	+		MPMX19_01115	0.30	-0.4
1,151,631	+		MPMX19_01115	0.30	-2.1
1,151,631	+		MPMX19_01115	0.30	-0.9
1,151,631	+		MPMX19_01115	0.30	-0.1
1,151,631	+		MPMX19_01115	0.30	-1.3
1,151,631	+		MPMX19_01115	0.30	+0.2
1,151,631	+		MPMX19_01115	0.30	-1.4
1,151,631	+		MPMX19_01115	0.30	+0.3
1,151,631	+		MPMX19_01115	0.30	-0.9
1,151,631	+		MPMX19_01115	0.30	+0.8
1,151,631	+		MPMX19_01115	0.30	-0.4
1,151,631	+		MPMX19_01115	0.30	-0.3
1,151,631	+		MPMX19_01115	0.30	+0.3
1,151,631	+		MPMX19_01115	0.30	-2.4
1,151,631	+		MPMX19_01115	0.30	+0.3
1,151,632	-		MPMX19_01115	0.31	-1.2
1,151,632	-		MPMX19_01115	0.31	-1.4
1,151,632	-		MPMX19_01115	0.31	-0.6
1,151,632	-		MPMX19_01115	0.31	-1.9
1,151,632	-		MPMX19_01115	0.31	-1.6
1,151,632	-		MPMX19_01115	0.31	-0.5
1,151,632	-		MPMX19_01115	0.31	+0.8
1,151,632	-		MPMX19_01115	0.31	+0.1
1,151,632	-		MPMX19_01115	0.31	-0.4
1,151,632	-		MPMX19_01115	0.31	-0.1
1,151,632	-		MPMX19_01115	0.31	-1.0
1,151,637	+		MPMX19_01115	0.31	-1.2
1,151,637	+		MPMX19_01115	0.31	+1.0
1,151,637	+		MPMX19_01115	0.31	+0.8
1,151,637	+		MPMX19_01115	0.31	-0.7
1,151,638	-		MPMX19_01115	0.31	-2.6
1,151,638	-		MPMX19_01115	0.31	+0.7
1,151,638	-		MPMX19_01115	0.31	-1.7
1,151,721	+		MPMX19_01115	0.43	-0.9
1,151,721	+		MPMX19_01115	0.43	-0.2
1,151,721	+		MPMX19_01115	0.43	-1.0
1,151,721	+		MPMX19_01115	0.43	-1.4
1,151,721	+		MPMX19_01115	0.43	-1.5
1,151,722	-		MPMX19_01115	0.43	-0.0
1,151,722	-		MPMX19_01115	0.43	-0.7
1,151,794	-		MPMX19_01115	0.53	-0.2
1,151,794	-		MPMX19_01115	0.53	+0.1
1,151,928	-		MPMX19_01115	0.71	-0.4
1,151,965	+		MPMX19_01115	0.76	-1.2
1,151,965	+		MPMX19_01115	0.76	-1.7
1,151,965	+		MPMX19_01115	0.76	-0.2
1,151,965	+		MPMX19_01115	0.76	+0.4
1,151,965	+		MPMX19_01115	0.76	+0.6
1,151,965	+		MPMX19_01115	0.76	-1.9
1,151,965	+		MPMX19_01115	0.76	-0.9
1,151,965	+		MPMX19_01115	0.76	-1.2
1,151,965	+		MPMX19_01115	0.76	-0.3
1,151,966	-		MPMX19_01115	0.76	-0.0
1,151,966	-		MPMX19_01115	0.76	+0.4
1,151,966	-		MPMX19_01115	0.76	-1.2
1,151,966	-		MPMX19_01115	0.76	-0.7
1,151,966	-		MPMX19_01115	0.76	-0.4
1,151,966	-		MPMX19_01115	0.76	-2.2
1,151,966	-		MPMX19_01115	0.76	-1.0
1,151,966	-		MPMX19_01115	0.76	-0.5
1,151,966	-		MPMX19_01115	0.76	-1.5
1,151,968	+		MPMX19_01115	0.77	-0.6
1,151,968	+		MPMX19_01115	0.77	-0.5
1,151,968	+		MPMX19_01115	0.77	-1.4
1,151,968	+		MPMX19_01115	0.77	-1.0
1,151,968	+		MPMX19_01115	0.77	-0.0
1,151,969	-		MPMX19_01115	0.77	-1.1
1,151,969	-		MPMX19_01115	0.77	+0.9
1,151,969	-		MPMX19_01115	0.77	-0.4
1,151,969	-		MPMX19_01115	0.77	+0.2
1,151,969	-		MPMX19_01115	0.77	-2.2
1,152,051	+		MPMX19_01115	0.88	+0.8
1,152,051	+		MPMX19_01115	0.88	+0.4
1,152,051	+		MPMX19_01115	0.88	-1.6
1,152,052	-		MPMX19_01115	0.88	-2.3
1,152,052	-		MPMX19_01115	0.88	-0.2
1,152,052	-		MPMX19_01115	0.88	+0.1
1,152,077	+				-2.1
1,152,077	+				-0.7
1,152,077	+				-0.1
1,152,077	+				-1.1
1,152,082	+				+0.2
1,152,082	+				-0.3
1,152,082	+				+0.4
1,152,082	+				-0.1
1,152,082	+				-0.3
1,152,082	+				-1.5
1,152,082	+				-0.6
1,152,082	+				-0.2
1,152,128	+				-0.9
1,152,128	+				-0.0
1,152,128	+				+0.3
1,152,128	+				-0.6
1,152,128	+				-0.6
1,152,128	+				+1.4
1,152,128	+				+0.4
1,152,128	+				-1.4
1,152,872	+		MPMX19_01117	0.27	-1.6
1,152,873	-		MPMX19_01117	0.27	-0.9
1,153,097	+		MPMX19_01117	0.45	-0.5
1,153,097	+		MPMX19_01117	0.45	-2.1
1,153,098	-		MPMX19_01117	0.45	-0.7
1,153,098	-		MPMX19_01117	0.45	-1.0
1,153,646	+		MPMX19_01117	0.89	+0.4
1,153,646	+		MPMX19_01117	0.89	-1.5
1,153,647	-		MPMX19_01117	0.89	-1.7
1,153,647	-		MPMX19_01117	0.89	+0.8
1,153,778	+				-0.4
1,153,831	+				-1.7
1,153,831	+				-1.2
1,153,831	+				-0.8
1,153,831	+				-1.7
1,153,831	+				+0.7
1,153,831	+				-0.7
1,153,831	+				-0.9
1,153,831	+				+1.6
1,153,831	+				-1.4
1,153,831	+				+0.6
1,153,831	+				+1.6
1,153,831	+				-0.7
1,153,831	+				-2.2
1,153,832	-				-2.3
1,153,832	-				-1.1
1,153,832	-				+0.3
1,153,832	-				-0.4
1,153,832	-				-2.1
1,153,832	-				-1.4
1,153,832	-				+0.8
1,153,832	-				-0.7
1,153,832	-				-1.5
1,153,832	-				-0.9
1,153,832	-				+0.5
1,153,832	-				+0.4
1,153,832	-				-1.2
1,153,859	+				+0.8
1,153,859	+				+1.4
1,153,859	+				-0.5
1,153,860	-				-0.2
1,153,860	-				-1.0
1,153,860	-				-0.2
1,153,860	-				-0.2
1,153,860	-				+0.0
1,153,879	+				-1.5
1,153,879	+				-2.3
1,153,880	-				-0.1
1,153,880	-				+0.5
1,153,880	-				-0.2
1,153,880	-				-0.5
1,153,880	-				-0.3
1,153,880	-				+0.3
1,153,880	-				-0.5
1,153,880	-				-1.6
1,153,880	-				+1.6
1,153,981	-		MPMX19_01118	0.12	-0.2
1,154,003	+		MPMX19_01118	0.19	-1.6
1,154,003	+		MPMX19_01118	0.19	-1.9
1,154,003	+		MPMX19_01118	0.19	-1.2
1,154,003	+		MPMX19_01118	0.19	-0.7
1,154,003	+		MPMX19_01118	0.19	-0.8
1,154,004	-		MPMX19_01118	0.19	-1.1
1,154,004	-		MPMX19_01118	0.19	-0.3
1,154,004	-		MPMX19_01118	0.19	-0.0
1,154,004	-		MPMX19_01118	0.19	-0.5
1,154,004	-		MPMX19_01118	0.19	-2.1
1,154,004	-		MPMX19_01118	0.19	-0.1
1,154,191	+		MPMX19_01118	0.80	-1.7
1,154,191	+		MPMX19_01118	0.80	+0.4
1,154,191	+		MPMX19_01118	0.80	-0.8
1,154,191	+		MPMX19_01118	0.80	+0.6
1,154,191	+		MPMX19_01118	0.80	+0.6
1,154,305	+				+2.1
1,154,305	+				-0.2
1,154,305	+				-1.2
1,154,305	+				-2.6
1,154,305	+				-2.0
1,154,305	+				-0.1
1,154,305	+				-1.0
1,154,305	+				+0.3
1,154,305	+				+0.3
1,154,305	+				-0.5
1,154,305	+				+0.1
1,154,305	+				-1.7
1,154,305	+				-0.0
1,154,305	+				+0.3
1,154,305	+				-1.6
1,154,305	+				-1.1
1,154,305	+				+0.3
1,154,305	+				+0.6
1,154,306	-				-0.0
1,154,306	-				-0.7
1,154,306	-				-0.6
1,154,306	-				+0.8
1,154,306	-				-0.0
1,154,306	-				+0.3
1,154,306	-				-1.2
1,154,473	+		MPMX19_01119	0.15	+0.7
1,154,473	+		MPMX19_01119	0.15	-1.4
1,154,473	+		MPMX19_01119	0.15	-0.9
1,154,473	+		MPMX19_01119	0.15	+1.0
1,154,473	+		MPMX19_01119	0.15	-0.7
1,154,473	+		MPMX19_01119	0.15	+0.1
1,154,474	-		MPMX19_01119	0.15	+0.9
1,154,474	-		MPMX19_01119	0.15	-0.4