Experiment: NL-CCM; high oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06748 and MPMX19_06749 are separated by 46 nucleotides MPMX19_06749 and MPMX19_06750 are separated by 70 nucleotides MPMX19_06750 and MPMX19_06751 are separated by 10 nucleotides
MPMX19_06748: MPMX19_06748 - Protein-glutamate methylesterase/protein-glutamine glutaminase of group 3 operon, at 13,111 to 14,235
_06748
MPMX19_06749: MPMX19_06749 - hypothetical protein, at 14,282 to 16,156
_06749
MPMX19_06750: MPMX19_06750 - Aliphatic sulfonates import ATP-binding protein SsuB, at 16,227 to 17,006
_06750
MPMX19_06751: MPMX19_06751 - Putative aliphatic sulfonates transport permease protein SsuC, at 17,017 to 17,811
_06751
Position (kb) 14
15
16
17 Strain fitness (log2 ratio) -2
-1
0
1
2 at 13.773 kb on + strand, within MPMX19_06748 at 13.773 kb on + strand, within MPMX19_06748 at 13.773 kb on + strand, within MPMX19_06748 at 13.773 kb on + strand, within MPMX19_06748 at 13.773 kb on + strand, within MPMX19_06748 at 13.774 kb on - strand, within MPMX19_06748 at 13.774 kb on - strand, within MPMX19_06748 at 13.774 kb on - strand, within MPMX19_06748 at 13.858 kb on - strand, within MPMX19_06748 at 13.902 kb on + strand, within MPMX19_06748 at 13.903 kb on - strand, within MPMX19_06748 at 13.903 kb on - strand, within MPMX19_06748 at 13.903 kb on - strand, within MPMX19_06748 at 13.903 kb on - strand, within MPMX19_06748 at 13.903 kb on - strand, within MPMX19_06748 at 13.903 kb on - strand, within MPMX19_06748 at 13.903 kb on - strand, within MPMX19_06748 at 13.903 kb on - strand, within MPMX19_06748 at 13.903 kb on - strand, within MPMX19_06748 at 13.930 kb on + strand, within MPMX19_06748 at 14.285 kb on + strand at 14.285 kb on + strand at 14.285 kb on + strand at 14.285 kb on + strand at 14.285 kb on + strand at 14.285 kb on + strand at 14.285 kb on + strand at 14.285 kb on + strand at 14.285 kb on + strand at 14.285 kb on + strand at 14.285 kb on + strand at 14.285 kb on + strand at 14.285 kb on + strand at 14.285 kb on + strand at 14.285 kb on + strand at 14.285 kb on + strand at 14.286 kb on - strand at 14.286 kb on - strand at 14.286 kb on - strand at 14.286 kb on - strand at 14.286 kb on - strand at 14.286 kb on - strand at 14.286 kb on - strand at 14.376 kb on + strand at 14.377 kb on - strand at 14.377 kb on - strand at 15.470 kb on + strand, within MPMX19_06749 at 15.471 kb on - strand, within MPMX19_06749 at 15.974 kb on + strand at 15.975 kb on - strand at 15.975 kb on - strand at 16.043 kb on + strand at 16.043 kb on + strand at 16.044 kb on - strand at 16.337 kb on + strand, within MPMX19_06750 at 16.338 kb on - strand, within MPMX19_06750 at 16.338 kb on - strand, within MPMX19_06750 at 16.395 kb on - strand, within MPMX19_06750 at 16.750 kb on + strand, within MPMX19_06750 at 16.750 kb on + strand, within MPMX19_06750 at 16.751 kb on - strand, within MPMX19_06750 at 16.751 kb on - strand, within MPMX19_06750 at 16.751 kb on - strand, within MPMX19_06750 at 16.751 kb on - strand, within MPMX19_06750 at 16.751 kb on - strand, within MPMX19_06750 at 16.751 kb on - strand, within MPMX19_06750 at 17.018 kb on + strand at 17.018 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; high oxygen remove 13,773 + MPMX19_06748 0.59 -0.7 13,773 + MPMX19_06748 0.59 -0.3 13,773 + MPMX19_06748 0.59 +1.1 13,773 + MPMX19_06748 0.59 +2.5 13,773 + MPMX19_06748 0.59 -0.5 13,774 - MPMX19_06748 0.59 +0.5 13,774 - MPMX19_06748 0.59 -0.3 13,774 - MPMX19_06748 0.59 -0.6 13,858 - MPMX19_06748 0.66 -0.1 13,902 + MPMX19_06748 0.70 +1.0 13,903 - MPMX19_06748 0.70 +0.8 13,903 - MPMX19_06748 0.70 +0.4 13,903 - MPMX19_06748 0.70 -0.6 13,903 - MPMX19_06748 0.70 +0.5 13,903 - MPMX19_06748 0.70 +2.2 13,903 - MPMX19_06748 0.70 -0.8 13,903 - MPMX19_06748 0.70 +0.9 13,903 - MPMX19_06748 0.70 +0.5 13,903 - MPMX19_06748 0.70 -0.9 13,930 + MPMX19_06748 0.73 -0.2 14,285 + -2.5 14,285 + +0.0 14,285 + +2.5 14,285 + -0.1 14,285 + +0.5 14,285 + +0.3 14,285 + +0.5 14,285 + -0.7 14,285 + -0.4 14,285 + -0.8 14,285 + -0.1 14,285 + -0.2 14,285 + -1.3 14,285 + +0.6 14,285 + -0.2 14,285 + +0.5 14,286 - -0.2 14,286 - -0.1 14,286 - -0.3 14,286 - -1.0 14,286 - -0.2 14,286 - -0.4 14,286 - +0.2 14,376 + +0.3 14,377 - +0.2 14,377 - +1.1 15,470 + MPMX19_06749 0.63 +0.6 15,471 - MPMX19_06749 0.63 -0.7 15,974 + +0.8 15,975 - +2.2 15,975 - -0.9 16,043 + -0.4 16,043 + +1.8 16,044 - +0.5 16,337 + MPMX19_06750 0.14 -0.6 16,338 - MPMX19_06750 0.14 -1.3 16,338 - MPMX19_06750 0.14 +0.2 16,395 - MPMX19_06750 0.22 -1.1 16,750 + MPMX19_06750 0.67 -0.2 16,750 + MPMX19_06750 0.67 -0.5 16,751 - MPMX19_06750 0.67 -2.4 16,751 - MPMX19_06750 0.67 -0.1 16,751 - MPMX19_06750 0.67 +0.1 16,751 - MPMX19_06750 0.67 +2.0 16,751 - MPMX19_06750 0.67 -0.8 16,751 - MPMX19_06750 0.67 -0.8 17,018 + +0.2 17,018 + -0.3
Or see this region's nucleotide sequence