Experiment: NL-CCM; high oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06540 and MPMX19_06541 are separated by 242 nucleotides MPMX19_06541 and MPMX19_06542 overlap by 4 nucleotides
MPMX19_06540: MPMX19_06540 - hypothetical protein, at 1 to 945
_06540
MPMX19_06541: MPMX19_06541 - hypothetical protein, at 1,188 to 1,703
_06541
MPMX19_06542: MPMX19_06542 - Putative multidrug export ATP-binding/permease protein, at 1,700 to 3,505
_06542
Position (kb) 1
2 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1.017 kb on + strand at 1.119 kb on + strand at 1.119 kb on + strand at 1.120 kb on - strand at 1.129 kb on + strand at 1.129 kb on + strand at 1.782 kb on + strand at 1.782 kb on + strand at 1.782 kb on + strand at 1.782 kb on + strand at 1.782 kb on + strand at 1.782 kb on + strand at 1.782 kb on + strand at 1.782 kb on + strand at 1.782 kb on + strand at 1.782 kb on + strand at 1.782 kb on + strand at 1.782 kb on + strand at 1.783 kb on - strand at 1.783 kb on - strand at 1.783 kb on - strand at 1.783 kb on - strand at 1.783 kb on - strand at 1.783 kb on - strand at 1.783 kb on - strand at 1.783 kb on - strand at 1.783 kb on - strand at 1.783 kb on - strand at 1.783 kb on - strand at 1.783 kb on - strand at 1.846 kb on + strand at 1.846 kb on + strand at 1.846 kb on + strand at 1.846 kb on + strand at 1.846 kb on + strand at 1.846 kb on + strand at 1.846 kb on + strand at 1.846 kb on + strand at 1.846 kb on + strand at 1.846 kb on + strand at 1.846 kb on + strand at 1.847 kb on - strand at 1.847 kb on - strand at 1.847 kb on - strand at 1.847 kb on - strand at 1.847 kb on - strand at 1.847 kb on - strand at 1.847 kb on - strand at 1.847 kb on - strand at 1.847 kb on - strand at 1.847 kb on - strand at 1.847 kb on - strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.848 kb on + strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.849 kb on - strand at 1.855 kb on + strand at 1.855 kb on + strand at 1.906 kb on + strand, within MPMX19_06542 at 1.906 kb on + strand, within MPMX19_06542 at 1.906 kb on + strand, within MPMX19_06542 at 1.907 kb on - strand, within MPMX19_06542 at 1.907 kb on - strand, within MPMX19_06542 at 1.907 kb on - strand, within MPMX19_06542 at 1.907 kb on - strand, within MPMX19_06542 at 1.907 kb on - strand, within MPMX19_06542 at 1.907 kb on - strand, within MPMX19_06542 at 1.907 kb on - strand, within MPMX19_06542 at 2.088 kb on + strand, within MPMX19_06542 at 2.088 kb on + strand, within MPMX19_06542 at 2.088 kb on + strand, within MPMX19_06542 at 2.088 kb on + strand, within MPMX19_06542 at 2.088 kb on + strand, within MPMX19_06542 at 2.089 kb on - strand, within MPMX19_06542 at 2.089 kb on - strand, within MPMX19_06542 at 2.089 kb on - strand, within MPMX19_06542 at 2.178 kb on + strand, within MPMX19_06542 at 2.178 kb on + strand, within MPMX19_06542 at 2.178 kb on + strand, within MPMX19_06542 at 2.178 kb on + strand, within MPMX19_06542 at 2.178 kb on + strand, within MPMX19_06542 at 2.179 kb on - strand, within MPMX19_06542 at 2.179 kb on - strand, within MPMX19_06542
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; high oxygen remove 1,017 + +0.0 1,119 + -0.4 1,119 + -1.5 1,120 - +0.5 1,129 + -0.3 1,129 + +0.3 1,782 + +0.0 1,782 + -1.0 1,782 + -0.4 1,782 + -1.2 1,782 + +0.2 1,782 + -0.3 1,782 + -0.2 1,782 + -0.2 1,782 + -0.6 1,782 + -0.5 1,782 + -2.3 1,782 + +0.2 1,783 - +0.1 1,783 - +0.2 1,783 - -0.3 1,783 - -0.2 1,783 - +0.0 1,783 - +0.2 1,783 - -0.2 1,783 - +0.3 1,783 - -0.2 1,783 - -1.0 1,783 - -0.0 1,783 - +0.9 1,846 + -0.4 1,846 + +0.1 1,846 + +0.2 1,846 + -0.3 1,846 + +0.6 1,846 + -0.1 1,846 + -0.0 1,846 + +0.5 1,846 + +0.2 1,846 + +1.1 1,846 + +0.7 1,847 - -0.0 1,847 - +0.3 1,847 - +0.2 1,847 - -1.3 1,847 - -0.4 1,847 - +0.1 1,847 - +0.5 1,847 - +0.7 1,847 - +0.2 1,847 - +0.1 1,847 - -0.3 1,848 + -0.1 1,848 + +0.3 1,848 + -0.5 1,848 + +0.4 1,848 + +0.2 1,848 + +0.6 1,848 + +1.0 1,848 + -0.4 1,848 + +0.2 1,848 + -2.0 1,848 + -0.3 1,848 + -2.2 1,848 + +0.2 1,848 + -0.2 1,848 + +0.5 1,848 + +0.1 1,848 + +0.0 1,848 + -0.8 1,848 + -0.1 1,848 + -0.7 1,848 + -0.1 1,848 + +0.7 1,848 + -0.1 1,848 + -0.6 1,848 + -1.7 1,848 + +0.8 1,848 + +0.5 1,848 + +0.0 1,848 + -0.1 1,848 + -0.4 1,848 + -1.2 1,848 + -0.2 1,848 + +0.3 1,848 + +0.0 1,848 + -1.3 1,848 + -0.4 1,848 + +0.5 1,848 + -0.3 1,848 + -0.6 1,848 + -1.0 1,848 + +0.3 1,848 + -1.2 1,848 + -0.1 1,849 - +0.5 1,849 - -0.6 1,849 - +0.9 1,849 - -1.0 1,849 - +0.0 1,849 - +0.7 1,849 - -0.1 1,849 - +0.3 1,849 - +0.0 1,849 - +0.1 1,849 - +0.1 1,849 - -1.2 1,849 - +0.2 1,849 - -0.4 1,849 - -1.4 1,849 - -1.0 1,849 - -0.6 1,849 - -2.2 1,849 - -0.5 1,849 - -2.5 1,849 - -1.1 1,849 - -1.4 1,849 - +0.0 1,849 - -0.8 1,849 - +1.4 1,849 - -0.6 1,849 - -0.3 1,849 - +0.3 1,849 - -0.5 1,849 - -0.4 1,849 - -1.7 1,849 - -0.3 1,849 - -0.8 1,849 - -0.6 1,849 - +0.2 1,849 - +1.1 1,849 - -0.0 1,849 - -0.5 1,849 - +0.1 1,849 - +0.3 1,855 + +0.6 1,855 + -0.5 1,906 + MPMX19_06542 0.11 +0.5 1,906 + MPMX19_06542 0.11 -0.2 1,906 + MPMX19_06542 0.11 +0.1 1,907 - MPMX19_06542 0.11 -1.8 1,907 - MPMX19_06542 0.11 -0.2 1,907 - MPMX19_06542 0.11 -1.5 1,907 - MPMX19_06542 0.11 -0.2 1,907 - MPMX19_06542 0.11 +0.5 1,907 - MPMX19_06542 0.11 +0.8 1,907 - MPMX19_06542 0.11 -0.8 2,088 + MPMX19_06542 0.21 -0.4 2,088 + MPMX19_06542 0.21 -0.4 2,088 + MPMX19_06542 0.21 -1.3 2,088 + MPMX19_06542 0.21 -0.9 2,088 + MPMX19_06542 0.21 -0.9 2,089 - MPMX19_06542 0.22 -0.1 2,089 - MPMX19_06542 0.22 -0.1 2,089 - MPMX19_06542 0.22 -2.5 2,178 + MPMX19_06542 0.26 -0.5 2,178 + MPMX19_06542 0.26 -0.4 2,178 + MPMX19_06542 0.26 +0.7 2,178 + MPMX19_06542 0.26 -0.7 2,178 + MPMX19_06542 0.26 +1.4 2,179 - MPMX19_06542 0.27 +1.9 2,179 - MPMX19_06542 0.27 -2.0
Or see this region's nucleotide sequence