Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03674

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
1,110,831	+		MPMX19_03673	0.74	+0.5
1,110,831	+		MPMX19_03673	0.74	-0.8
1,110,951	+		MPMX19_03673	0.87	+0.1
1,110,951	+		MPMX19_03673	0.87	-0.4
1,110,951	+		MPMX19_03673	0.87	-0.5
1,110,951	+		MPMX19_03673	0.87	+0.7
1,110,951	+		MPMX19_03673	0.87	+0.4
1,110,952	-		MPMX19_03673	0.87	-0.1
1,110,952	-		MPMX19_03673	0.87	-0.1
1,110,952	-		MPMX19_03673	0.87	-3.1
1,110,957	+		MPMX19_03673	0.87	-0.7
1,110,957	+		MPMX19_03673	0.87	+1.5
1,110,957	+		MPMX19_03673	0.87	-2.2
1,110,957	+		MPMX19_03673	0.87	-1.5
1,110,957	+		MPMX19_03673	0.87	-1.3
1,110,958	-		MPMX19_03673	0.87	-0.1
1,110,958	-		MPMX19_03673	0.87	-0.5
1,110,958	-		MPMX19_03673	0.87	-2.5
1,110,958	-		MPMX19_03673	0.87	-1.0
1,110,958	-		MPMX19_03673	0.87	-1.0
1,110,958	-		MPMX19_03673	0.87	-0.3
1,110,958	-		MPMX19_03673	0.87	+0.5
1,110,958	-		MPMX19_03673	0.87	-1.8
1,110,958	-		MPMX19_03673	0.87	-1.2
1,110,958	-		MPMX19_03673	0.87	+0.1
1,110,958	-		MPMX19_03673	0.87	-1.4
1,110,958	-		MPMX19_03673	0.87	-1.0
1,110,958	-		MPMX19_03673	0.87	-0.5
1,110,978	+		MPMX19_03673	0.89	+0.3
1,110,978	+		MPMX19_03673	0.89	-0.8
1,110,979	-		MPMX19_03673	0.90	+0.4
1,110,979	-		MPMX19_03673	0.90	+0.6
1,110,979	-		MPMX19_03673	0.90	-0.4
1,110,979	-		MPMX19_03673	0.90	+0.5
1,110,979	-		MPMX19_03673	0.90	-1.0
1,110,979	-		MPMX19_03673	0.90	+0.5
1,111,037	+				-1.7
1,111,037	+				+0.2
1,111,037	+				+0.2
1,111,037	+				-0.2
1,111,037	+				-0.8
1,111,037	+				-0.0
1,111,037	+				+1.0
1,111,037	+				-0.8
1,111,038	-				+0.3
1,111,038	-				-1.9
1,111,038	-				-0.8
1,111,038	-				-0.6
1,111,038	-				+0.6
1,111,038	-				-0.6
1,111,038	-				+1.0
1,111,038	-				+0.2
1,111,038	-				+0.8
1,111,038	-				+0.4
1,111,368	+				+0.2
1,111,368	+				-1.9
1,111,369	-				+0.2
1,111,369	-				+1.0
1,111,369	-				+0.6
1,111,369	-				-1.4
1,111,428	+				+1.5
1,111,429	-				+0.5
1,111,429	-				-0.7
1,111,429	-				-1.6
1,111,429	-				+0.2
1,111,429	-				-1.0
1,111,429	-				-0.3
1,111,429	-				+0.8
1,111,431	+				+0.7
1,111,431	+				+1.3
1,111,431	+				-0.6
1,111,431	+				-0.2
1,111,431	+				+0.7
1,111,431	+				+0.6
1,111,431	+				-0.5
1,111,431	+				-1.3
1,111,431	+				-1.0
1,111,431	+				-1.3
1,111,431	+				-0.8
1,111,431	+				-0.5
1,111,431	+				-0.0
1,111,431	+				+0.8
1,111,431	+				-1.4
1,111,431	+				+0.5
1,111,431	+				-1.0
1,111,431	+				-0.0
1,111,432	-				+3.1
1,111,432	-				-1.6
1,111,432	-				+0.3
1,111,432	-				-0.5
1,111,432	-				-0.8
1,111,432	-				-1.3
1,111,432	-				-2.3
1,111,432	-				-1.3
1,111,432	-				-1.0
1,111,432	-				-0.9
1,111,433	+				-0.8
1,111,434	-				+1.8
1,111,434	-				+0.8
1,111,434	-				+1.1
1,111,434	-				-0.2
1,111,435	+				-1.9
1,111,436	-				+0.4
1,111,436	-				-0.8
1,111,454	+				-0.9
1,111,577	+				-0.6
1,111,578	-				+0.3
1,111,738	+				+1.5
1,111,739	-				+0.2
1,111,791	+				+0.4
1,111,792	-				-0.6
1,111,939	+		MPMX19_03674	0.11	-0.3
1,111,939	+		MPMX19_03674	0.11	-0.2
1,111,939	+		MPMX19_03674	0.11	+0.5
1,111,939	+		MPMX19_03674	0.11	-0.6
1,111,939	+		MPMX19_03674	0.11	+0.6
1,111,966	+		MPMX19_03674	0.13	-0.0
1,111,966	+		MPMX19_03674	0.13	-0.0
1,111,966	+		MPMX19_03674	0.13	-0.8
1,111,966	+		MPMX19_03674	0.13	+0.1
1,111,967	-		MPMX19_03674	0.13	+1.0
1,111,967	-		MPMX19_03674	0.13	-0.7
1,112,215	+		MPMX19_03674	0.33	-0.2
1,112,215	+		MPMX19_03674	0.33	-1.0
1,112,215	+		MPMX19_03674	0.33	-0.8
1,112,215	+		MPMX19_03674	0.33	+0.2
1,112,215	+		MPMX19_03674	0.33	+0.1
1,112,216	-		MPMX19_03674	0.33	-0.8
1,112,227	-		MPMX19_03674	0.34	-1.3
1,112,308	+		MPMX19_03674	0.40	+0.3
1,112,308	+		MPMX19_03674	0.40	-1.3
1,112,308	+		MPMX19_03674	0.40	+0.9
1,112,308	+		MPMX19_03674	0.40	+0.4
1,112,308	+		MPMX19_03674	0.40	-0.2
1,112,308	+		MPMX19_03674	0.40	-1.4
1,112,309	-		MPMX19_03674	0.41	-1.6
1,112,309	-		MPMX19_03674	0.41	-0.6
1,112,309	-		MPMX19_03674	0.41	+0.3
1,112,309	-		MPMX19_03674	0.41	-0.3
1,112,309	-		MPMX19_03674	0.41	-1.1
1,112,309	-		MPMX19_03674	0.41	+0.3
1,112,309	-		MPMX19_03674	0.41	+0.3
1,112,323	+		MPMX19_03674	0.42	-0.8
1,112,323	+		MPMX19_03674	0.42	-0.5
1,112,323	+		MPMX19_03674	0.42	+1.1
1,112,323	+		MPMX19_03674	0.42	-0.6
1,112,323	+		MPMX19_03674	0.42	+0.5
1,112,323	+		MPMX19_03674	0.42	-0.0
1,112,324	-		MPMX19_03674	0.42	-2.0
1,112,324	-		MPMX19_03674	0.42	-1.3
1,112,493	+		MPMX19_03674	0.55	-0.7
1,112,557	+		MPMX19_03674	0.60	+1.1
1,112,557	+		MPMX19_03674	0.60	+2.2
1,112,557	+		MPMX19_03674	0.60	-0.8
1,112,557	+		MPMX19_03674	0.60	-0.1
1,112,557	+		MPMX19_03674	0.60	-1.6
1,112,557	+		MPMX19_03674	0.60	+0.2
1,112,558	-		MPMX19_03674	0.60	+1.5
1,112,558	-		MPMX19_03674	0.60	+0.4
1,112,558	-		MPMX19_03674	0.60	-0.0
1,112,558	-		MPMX19_03674	0.60	-0.4
1,112,558	-		MPMX19_03674	0.60	+0.5
1,112,558	-		MPMX19_03674	0.60	-0.6
1,112,558	-		MPMX19_03674	0.60	+0.6
1,112,662	+		MPMX19_03674	0.69	-0.0
1,112,663	-		MPMX19_03674	0.69	+0.5
1,112,663	-		MPMX19_03674	0.69	+0.8
1,112,663	-		MPMX19_03674	0.69	+1.5
1,112,698	+		MPMX19_03674	0.72	-1.2
1,112,698	+		MPMX19_03674	0.72	+0.3
1,112,698	+		MPMX19_03674	0.72	-0.2
1,112,698	+		MPMX19_03674	0.72	-0.8
1,112,698	+		MPMX19_03674	0.72	-0.6
1,112,698	+		MPMX19_03674	0.72	+0.2
1,112,698	+		MPMX19_03674	0.72	-0.1
1,112,698	+		MPMX19_03674	0.72	+0.2
1,112,698	+		MPMX19_03674	0.72	+1.0
1,112,698	+		MPMX19_03674	0.72	-2.4
1,112,699	-		MPMX19_03674	0.72	-1.2
1,112,699	-		MPMX19_03674	0.72	+0.5
1,112,699	-		MPMX19_03674	0.72	-0.5
1,112,699	-		MPMX19_03674	0.72	-0.8
1,112,699	-		MPMX19_03674	0.72	+0.1
1,112,699	-		MPMX19_03674	0.72	-0.3
1,112,699	-		MPMX19_03674	0.72	+1.5
1,112,699	-		MPMX19_03674	0.72	-2.4
1,112,699	-		MPMX19_03674	0.72	+0.4
1,112,700	+		MPMX19_03674	0.72	+0.2
1,112,700	+		MPMX19_03674	0.72	-0.3
1,112,700	+		MPMX19_03674	0.72	+0.8
1,112,700	+		MPMX19_03674	0.72	+0.1
1,112,701	-		MPMX19_03674	0.72	+1.2
1,112,701	-		MPMX19_03674	0.72	-0.6
1,112,701	-		MPMX19_03674	0.72	-1.5
1,112,701	-		MPMX19_03674	0.72	-0.2
1,112,701	-		MPMX19_03674	0.72	+2.1
1,112,701	-		MPMX19_03674	0.72	-1.4
1,112,710	+		MPMX19_03674	0.72	-0.0
1,112,710	+		MPMX19_03674	0.72	-0.4
1,112,710	+		MPMX19_03674	0.72	-1.0
1,112,710	+		MPMX19_03674	0.72	-0.3
1,112,710	+		MPMX19_03674	0.72	-0.2
1,112,710	+		MPMX19_03674	0.72	-2.7
1,112,711	-		MPMX19_03674	0.73	-0.2
1,112,711	-		MPMX19_03674	0.73	+0.5
1,112,711	-		MPMX19_03674	0.73	+0.8
1,112,711	-		MPMX19_03674	0.73	-0.3
1,112,713	+		MPMX19_03674	0.73	+0.5
1,112,713	+		MPMX19_03674	0.73	-1.0
1,112,713	+		MPMX19_03674	0.73	-0.2
1,112,713	+		MPMX19_03674	0.73	-0.6
1,112,713	+		MPMX19_03674	0.73	+1.4
1,112,713	+		MPMX19_03674	0.73	-0.4
1,112,713	+		MPMX19_03674	0.73	-0.3
1,112,713	+		MPMX19_03674	0.73	-0.6
1,112,713	+		MPMX19_03674	0.73	+0.8
1,112,714	-		MPMX19_03674	0.73	+0.6
1,112,714	-		MPMX19_03674	0.73	+0.3
1,112,714	-		MPMX19_03674	0.73	-0.2
1,112,714	-		MPMX19_03674	0.73	-0.6
1,112,714	-		MPMX19_03674	0.73	-0.3
1,112,714	-		MPMX19_03674	0.73	-0.3
1,112,714	-		MPMX19_03674	0.73	-0.2
1,112,714	-		MPMX19_03674	0.73	+0.4
1,112,714	-		MPMX19_03674	0.73	-0.2
1,112,773	+		MPMX19_03674	0.78	+0.1
1,112,773	+		MPMX19_03674	0.78	-2.6
1,112,872	+		MPMX19_03674	0.85	+1.1
1,112,950	+				-0.6
1,112,950	+				+0.1
1,112,984	-				-1.5
1,113,390	+		MPMX19_03675	0.29	-0.2
1,113,390	+		MPMX19_03675	0.29	-0.9
1,113,390	+		MPMX19_03675	0.29	-1.1
1,113,390	+		MPMX19_03675	0.29	-0.8
1,113,390	+		MPMX19_03675	0.29	-0.6
1,113,390	+		MPMX19_03675	0.29	-1.4
1,113,390	+		MPMX19_03675	0.29	-1.5
1,113,390	+		MPMX19_03675	0.29	-1.8
1,113,390	+		MPMX19_03675	0.29	+0.5
1,113,390	+		MPMX19_03675	0.29	-0.5
1,113,391	-		MPMX19_03675	0.29	-0.6
1,113,391	-		MPMX19_03675	0.29	-0.2
1,113,391	-		MPMX19_03675	0.29	+1.4
1,113,391	-		MPMX19_03675	0.29	-0.7
1,113,391	-		MPMX19_03675	0.29	-0.2
1,113,391	-		MPMX19_03675	0.29	-1.0
1,113,391	-		MPMX19_03675	0.29	-2.7
1,113,477	+		MPMX19_03675	0.36	-0.1
1,113,477	+		MPMX19_03675	0.36	-0.9
1,113,477	+		MPMX19_03675	0.36	+0.3
1,113,478	-		MPMX19_03675	0.36	-0.8
1,113,478	-		MPMX19_03675	0.36	-0.0
1,113,478	-		MPMX19_03675	0.36	-0.4
1,113,478	-		MPMX19_03675	0.36	-0.7
1,113,478	-		MPMX19_03675	0.36	-0.3
1,113,478	-		MPMX19_03675	0.36	-0.1
1,113,591	+		MPMX19_03675	0.46	-0.9
1,113,591	+		MPMX19_03675	0.46	+0.7
1,113,591	+		MPMX19_03675	0.46	+0.3
1,113,591	+		MPMX19_03675	0.46	-0.3
1,113,592	-		MPMX19_03675	0.46	-2.0
1,113,592	-		MPMX19_03675	0.46	-1.5
1,113,592	-		MPMX19_03675	0.46	-0.3
1,113,592	-		MPMX19_03675	0.46	+1.5
1,113,621	+		MPMX19_03675	0.49	-1.2
1,113,622	-		MPMX19_03675	0.49	+0.1
1,113,622	-		MPMX19_03675	0.49	+0.4
1,113,622	-		MPMX19_03675	0.49	-1.8
1,113,622	-		MPMX19_03675	0.49	-2.0
1,113,664	-		MPMX19_03675	0.52	-0.9
1,113,774	+		MPMX19_03675	0.62	+0.1
1,113,774	+		MPMX19_03675	0.62	-1.6
1,113,851	+		MPMX19_03675	0.69	-1.5
1,113,851	+		MPMX19_03675	0.69	+1.3
1,113,851	+		MPMX19_03675	0.69	-1.0
1,113,851	+		MPMX19_03675	0.69	-1.5
1,113,851	+		MPMX19_03675	0.69	-0.4