Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02718

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
2,852,796	-				-0.6
2,852,796	-				-1.7
2,852,796	-				+0.3
2,852,796	-				-0.1
2,852,796	-				-0.7
2,852,796	-				-0.0
2,852,806	-				-0.4
2,852,806	-				-0.1
2,852,806	-				+0.7
2,852,806	-				+0.1
2,853,641	+				-0.6
2,853,650	+				+0.5
2,853,650	+				+0.4
2,853,650	+				-0.5
2,853,650	+				+0.5
2,853,650	+				+2.0
2,853,650	+				+0.4
2,853,650	+				-0.9
2,853,650	+				+0.3
2,853,650	+				-1.4
2,853,650	+				+0.2
2,853,833	+				-0.6
2,853,833	+				-0.1
2,853,833	+				-0.1
2,853,833	+				-1.0
2,853,833	+				+0.2
2,853,833	+				-0.2
2,853,833	+				+0.6
2,853,833	+				+0.2
2,853,833	+				-0.6
2,853,833	+				+0.1
2,853,833	+				+0.1
2,853,833	+				+0.5
2,853,833	+				+0.2
2,853,833	+				+0.0
2,853,834	-				-0.3
2,853,834	-				-0.2
2,853,834	-				-1.1
2,853,834	-				+0.7
2,853,834	-				-0.1
2,853,834	-				-0.0
2,853,834	-				+0.6
2,853,834	-				+0.0
2,853,834	-				+0.6
2,853,834	-				-1.3
2,853,834	-				+0.6
2,853,834	-				-0.1
2,853,834	-				-1.5
2,853,834	-				+0.9
2,853,834	-				+0.8
2,853,834	-				+0.1
2,853,834	-				-0.3
2,853,834	-				+0.9
2,853,834	-				+0.4
2,853,834	-				-0.8
2,853,834	-				+1.3
2,853,834	-				-0.3
2,853,834	-				-0.1
2,853,834	-				+0.1
2,853,834	-				+0.1
2,853,834	-				-1.6
2,853,834	-				+0.7
2,853,834	-				-2.6
2,853,834	-				-0.6
2,853,834	-				-1.9
2,853,834	-				-0.5
2,854,013	+		MPMX19_02718	0.19	+0.0
2,854,013	+		MPMX19_02718	0.19	-1.7
2,854,013	+		MPMX19_02718	0.19	+0.9
2,854,013	+		MPMX19_02718	0.19	-0.1
2,854,013	+		MPMX19_02718	0.19	-2.1
2,854,014	-		MPMX19_02718	0.19	+1.2
2,854,014	-		MPMX19_02718	0.19	-2.5
2,854,014	-		MPMX19_02718	0.19	-0.3
2,854,014	-		MPMX19_02718	0.19	+1.0
2,854,014	-		MPMX19_02718	0.19	-1.3
2,854,014	-		MPMX19_02718	0.19	-2.0
2,854,014	-		MPMX19_02718	0.19	+0.7
2,854,014	-		MPMX19_02718	0.19	-0.3
2,854,014	-		MPMX19_02718	0.19	-0.3
2,854,514	+		MPMX19_02718	0.47	-1.3
2,854,515	-		MPMX19_02718	0.47	+1.1
2,854,538	+		MPMX19_02718	0.48	-0.0
2,854,538	+		MPMX19_02718	0.48	+0.1
2,854,538	+		MPMX19_02718	0.48	+0.6
2,854,838	+		MPMX19_02718	0.65	+1.0
2,854,838	+		MPMX19_02718	0.65	+1.0
2,854,838	+		MPMX19_02718	0.65	+0.5
2,854,838	+		MPMX19_02718	0.65	-0.5
2,854,839	-		MPMX19_02718	0.65	+0.6
2,854,839	-		MPMX19_02718	0.65	-0.9
2,854,839	-		MPMX19_02718	0.65	+0.2
2,854,839	-		MPMX19_02718	0.65	-0.7
2,854,839	-		MPMX19_02718	0.65	+0.7
2,854,839	-		MPMX19_02718	0.65	-1.0
2,854,839	-		MPMX19_02718	0.65	+0.5
2,854,839	-		MPMX19_02718	0.65	-0.3
2,854,928	+		MPMX19_02718	0.70	-0.4
2,854,928	+		MPMX19_02718	0.70	+1.0
2,854,928	+		MPMX19_02718	0.70	-0.7
2,854,928	+		MPMX19_02718	0.70	+0.7
2,854,928	+		MPMX19_02718	0.70	-0.3
2,854,928	+		MPMX19_02718	0.70	-2.0
2,854,928	+		MPMX19_02718	0.70	-0.7
2,854,929	-		MPMX19_02718	0.70	-0.5
2,854,929	-		MPMX19_02718	0.70	-0.3
2,854,929	-		MPMX19_02718	0.70	+0.7
2,854,929	-		MPMX19_02718	0.70	+0.3
2,854,929	-		MPMX19_02718	0.70	-0.9
2,854,929	-		MPMX19_02718	0.70	+0.2
2,854,929	-		MPMX19_02718	0.70	+0.0
2,854,929	-		MPMX19_02718	0.70	-1.0
2,854,929	-		MPMX19_02718	0.70	-1.6
2,854,929	-		MPMX19_02718	0.70	-1.6
2,854,929	-		MPMX19_02718	0.70	+0.4
2,854,929	-		MPMX19_02718	0.70	+0.2
2,854,929	-		MPMX19_02718	0.70	-0.6
2,855,006	-		MPMX19_02718	0.74	-0.8
2,855,006	-		MPMX19_02718	0.74	+0.5
2,855,070	-		MPMX19_02718	0.78	+0.6
2,855,070	-		MPMX19_02718	0.78	-0.9
2,855,070	-		MPMX19_02718	0.78	+0.1
2,855,144	+		MPMX19_02718	0.82	+0.5
2,855,144	+		MPMX19_02718	0.82	-1.7
2,855,506	+				+1.0
2,855,506	+				+0.7
2,855,506	+				-0.9
2,855,506	+				+1.3
2,855,506	+				+0.4
2,855,507	-				-0.2
2,855,522	+				-1.2
2,855,526	-				-0.8
2,855,530	-				+0.8
2,855,540	-				+0.0
2,855,568	+				+0.1
2,855,580	+				+0.0
2,855,580	+				+1.3
2,855,580	+				+0.5
2,855,581	-				-0.3
2,855,582	+				+1.1
2,855,582	+				+0.1
2,855,582	+				+0.1
2,855,582	+				+0.1
2,855,582	+				+0.3
2,855,582	+				+0.8
2,855,583	-				+0.4
2,855,583	-				+0.1
2,855,583	-				-0.6
2,855,603	-				-0.5
2,855,603	-				-1.6
2,855,608	+				-0.4
2,855,608	+				-0.6
2,855,609	-				-1.4
2,855,615	-				-1.3
2,855,615	-				+0.1
2,855,637	+				+1.0
2,855,638	-				-0.1
2,855,685	+				-0.5
2,855,685	+				+0.4
2,855,685	+				+0.5
2,855,685	+				-0.7
2,855,685	+				+1.0
2,855,685	+				-0.0
2,855,685	+				-1.0
2,855,686	-				+0.5
2,855,686	-				+0.4
2,855,748	+		MPMX19_02719	0.13	+0.4
2,855,748	+		MPMX19_02719	0.13	+0.1
2,855,748	+		MPMX19_02719	0.13	-0.3
2,855,748	+		MPMX19_02719	0.13	-0.1
2,855,749	-		MPMX19_02719	0.13	-0.6
2,855,749	-		MPMX19_02719	0.13	-0.9
2,855,832	+		MPMX19_02719	0.22	+0.7
2,855,832	+		MPMX19_02719	0.22	+0.2
2,855,832	+		MPMX19_02719	0.22	+1.0
2,855,832	+		MPMX19_02719	0.22	+0.4
2,855,832	+		MPMX19_02719	0.22	+0.6
2,855,832	+		MPMX19_02719	0.22	-1.3
2,855,832	+		MPMX19_02719	0.22	-0.9
2,855,832	+		MPMX19_02719	0.22	-0.1
2,855,832	+		MPMX19_02719	0.22	-0.9
2,855,832	+		MPMX19_02719	0.22	+0.4
2,855,833	-		MPMX19_02719	0.22	-2.3
2,855,833	-		MPMX19_02719	0.22	-0.5
2,855,833	-		MPMX19_02719	0.22	+1.7
2,855,833	-		MPMX19_02719	0.22	-1.1
2,855,833	-		MPMX19_02719	0.22	-0.9
2,855,833	-		MPMX19_02719	0.22	+0.7
2,855,833	-		MPMX19_02719	0.22	+0.0
2,855,833	-		MPMX19_02719	0.22	-0.9
2,855,833	-		MPMX19_02719	0.22	-0.1
2,855,833	-		MPMX19_02719	0.22	+0.1
2,855,833	-		MPMX19_02719	0.22	+2.0
2,855,833	-		MPMX19_02719	0.22	-1.7
2,855,880	+		MPMX19_02719	0.28	+0.1
2,855,880	+		MPMX19_02719	0.28	-0.2
2,855,880	+		MPMX19_02719	0.28	+1.1
2,855,880	+		MPMX19_02719	0.28	-2.1
2,855,880	+		MPMX19_02719	0.28	-0.1
2,855,880	+		MPMX19_02719	0.28	+0.1
2,855,880	+		MPMX19_02719	0.28	+0.5
2,855,880	+		MPMX19_02719	0.28	-1.5
2,855,880	+		MPMX19_02719	0.28	-1.4
2,855,880	+		MPMX19_02719	0.28	+0.3
2,855,880	+		MPMX19_02719	0.28	+0.4
2,855,880	+		MPMX19_02719	0.28	-0.5
2,855,880	+		MPMX19_02719	0.28	+0.5
2,855,880	+		MPMX19_02719	0.28	-1.7
2,855,880	+		MPMX19_02719	0.28	-0.3
2,855,880	+		MPMX19_02719	0.28	-0.6
2,855,880	+		MPMX19_02719	0.28	+0.9
2,855,880	+		MPMX19_02719	0.28	+1.1
2,855,880	+		MPMX19_02719	0.28	-1.5
2,855,880	+		MPMX19_02719	0.28	+0.3
2,855,880	+		MPMX19_02719	0.28	+0.8
2,855,880	+		MPMX19_02719	0.28	+0.7
2,855,880	+		MPMX19_02719	0.28	-1.3
2,855,880	+		MPMX19_02719	0.28	-2.0
2,855,880	+		MPMX19_02719	0.28	+0.1
2,855,880	+		MPMX19_02719	0.28	-1.5
2,855,880	+		MPMX19_02719	0.28	-0.3
2,855,880	+		MPMX19_02719	0.28	+1.7
2,855,880	+		MPMX19_02719	0.28	-1.2
2,855,880	+		MPMX19_02719	0.28	-0.3
2,855,881	-		MPMX19_02719	0.28	-2.0
2,855,881	-		MPMX19_02719	0.28	-0.9
2,855,881	-		MPMX19_02719	0.28	-1.3
2,855,881	-		MPMX19_02719	0.28	+0.3
2,855,881	-		MPMX19_02719	0.28	-0.2
2,855,881	-		MPMX19_02719	0.28	-0.3
2,855,881	-		MPMX19_02719	0.28	-0.1
2,855,881	-		MPMX19_02719	0.28	+0.5
2,855,881	-		MPMX19_02719	0.28	+1.2
2,855,881	-		MPMX19_02719	0.28	-1.5
2,855,881	-		MPMX19_02719	0.28	-0.1
2,855,881	-		MPMX19_02719	0.28	-0.6
2,855,881	-		MPMX19_02719	0.28	-0.7
2,855,881	-		MPMX19_02719	0.28	-0.5
2,855,881	-		MPMX19_02719	0.28	+1.1
2,855,881	-		MPMX19_02719	0.28	-1.3
2,855,881	-		MPMX19_02719	0.28	+0.1
2,855,881	-		MPMX19_02719	0.28	-0.6
2,855,881	-		MPMX19_02719	0.28	+0.6
2,855,881	-		MPMX19_02719	0.28	-0.5
2,855,881	-		MPMX19_02719	0.28	+0.1
2,855,881	-		MPMX19_02719	0.28	+0.4
2,855,881	-		MPMX19_02719	0.28	+0.5
2,855,881	-		MPMX19_02719	0.28	+0.4
2,855,881	-		MPMX19_02719	0.28	-1.3
2,855,881	-		MPMX19_02719	0.28	-0.9
2,856,030	+		MPMX19_02719	0.45	-0.4
2,856,069	+		MPMX19_02719	0.49	+1.7
2,856,069	+		MPMX19_02719	0.49	-0.9
2,856,070	-		MPMX19_02719	0.50	+0.2
2,856,070	-		MPMX19_02719	0.50	-1.0
2,856,070	-		MPMX19_02719	0.50	-1.1
2,856,070	-		MPMX19_02719	0.50	+1.0
2,856,070	-		MPMX19_02719	0.50	-1.1
2,856,078	+		MPMX19_02719	0.50	+0.0
2,856,078	+		MPMX19_02719	0.50	-0.9
2,856,078	+		MPMX19_02719	0.50	+0.4
2,856,079	-		MPMX19_02719	0.51	+0.1
2,856,183	+		MPMX19_02719	0.62	+3.0
2,856,183	+		MPMX19_02719	0.62	+0.9
2,856,183	+		MPMX19_02719	0.62	-0.4
2,856,183	+		MPMX19_02719	0.62	+0.1
2,856,183	+		MPMX19_02719	0.62	-0.3
2,856,184	-		MPMX19_02719	0.63	-1.5
2,856,184	-		MPMX19_02719	0.63	+1.5
2,856,184	-		MPMX19_02719	0.63	-0.1
2,856,205	-		MPMX19_02719	0.65	-0.5