Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02678

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
2,797,392	-		MPMX19_02676	0.55	+1.3
2,797,392	-		MPMX19_02676	0.55	-0.1
2,797,430	+		MPMX19_02676	0.60	-2.0
2,797,430	+		MPMX19_02676	0.60	-0.1
2,797,430	+		MPMX19_02676	0.60	+1.1
2,797,430	+		MPMX19_02676	0.60	-0.3
2,797,430	+		MPMX19_02676	0.60	-0.9
2,797,430	+		MPMX19_02676	0.60	-1.3
2,797,430	+		MPMX19_02676	0.60	+0.1
2,797,430	+		MPMX19_02676	0.60	+1.0
2,797,430	+		MPMX19_02676	0.60	-1.5
2,797,430	+		MPMX19_02676	0.60	-2.7
2,797,430	+		MPMX19_02676	0.60	-0.1
2,797,430	+		MPMX19_02676	0.60	-0.8
2,797,430	+		MPMX19_02676	0.60	-1.0
2,797,430	+		MPMX19_02676	0.60	-0.5
2,797,430	+		MPMX19_02676	0.60	-0.7
2,797,430	+		MPMX19_02676	0.60	+0.2
2,797,431	-		MPMX19_02676	0.60	-1.1
2,797,431	-		MPMX19_02676	0.60	-0.7
2,797,431	-		MPMX19_02676	0.60	+0.9
2,797,431	-		MPMX19_02676	0.60	-1.6
2,797,431	-		MPMX19_02676	0.60	-0.6
2,797,431	-		MPMX19_02676	0.60	-1.3
2,797,431	-		MPMX19_02676	0.60	+0.1
2,797,431	-		MPMX19_02676	0.60	+0.5
2,797,431	-		MPMX19_02676	0.60	-1.7
2,797,431	-		MPMX19_02676	0.60	+1.1
2,797,431	-		MPMX19_02676	0.60	-1.7
2,797,511	+		MPMX19_02676	0.70	-1.6
2,797,511	+		MPMX19_02676	0.70	-0.6
2,797,512	-		MPMX19_02676	0.70	-1.7
2,797,512	-		MPMX19_02676	0.70	+0.2
2,797,523	+		MPMX19_02676	0.71	-1.7
2,797,523	+		MPMX19_02676	0.71	-0.2
2,797,523	+		MPMX19_02676	0.71	-1.1
2,797,523	+		MPMX19_02676	0.71	+0.2
2,797,524	-		MPMX19_02676	0.71	-0.1
2,797,524	-		MPMX19_02676	0.71	-0.2
2,797,524	-		MPMX19_02676	0.71	-1.5
2,797,524	-		MPMX19_02676	0.71	-0.5
2,797,524	-		MPMX19_02676	0.71	-0.5
2,797,524	-		MPMX19_02676	0.71	+0.4
2,797,589	+		MPMX19_02676	0.79	-1.5
2,797,589	+		MPMX19_02676	0.79	-1.0
2,797,589	+		MPMX19_02676	0.79	+0.8
2,797,589	+		MPMX19_02676	0.79	+0.3
2,797,589	+		MPMX19_02676	0.79	-0.1
2,797,589	+		MPMX19_02676	0.79	-0.2
2,797,589	+		MPMX19_02676	0.79	+1.2
2,797,589	+		MPMX19_02676	0.79	-1.2
2,797,589	+		MPMX19_02676	0.79	-0.3
2,797,589	+		MPMX19_02676	0.79	-0.2
2,797,589	+		MPMX19_02676	0.79	+0.4
2,797,589	+		MPMX19_02676	0.79	-0.3
2,797,589	+		MPMX19_02676	0.79	-1.2
2,797,589	+		MPMX19_02676	0.79	-0.5
2,797,589	+		MPMX19_02676	0.79	-0.0
2,797,589	+		MPMX19_02676	0.79	+0.6
2,797,589	+		MPMX19_02676	0.79	-1.3
2,797,589	+		MPMX19_02676	0.79	-0.3
2,797,589	+		MPMX19_02676	0.79	-1.0
2,797,589	+		MPMX19_02676	0.79	+1.3
2,797,589	+		MPMX19_02676	0.79	+0.5
2,797,590	-		MPMX19_02676	0.79	+0.0
2,797,590	-		MPMX19_02676	0.79	-0.7
2,797,590	-		MPMX19_02676	0.79	-1.3
2,797,590	-		MPMX19_02676	0.79	-1.2
2,797,590	-		MPMX19_02676	0.79	-0.5
2,797,590	-		MPMX19_02676	0.79	-0.4
2,797,590	-		MPMX19_02676	0.79	-0.5
2,797,590	-		MPMX19_02676	0.79	+0.1
2,797,590	-		MPMX19_02676	0.79	-0.7
2,797,590	-		MPMX19_02676	0.79	+0.4
2,797,590	-		MPMX19_02676	0.79	-0.7
2,797,590	-		MPMX19_02676	0.79	+2.0
2,797,590	-		MPMX19_02676	0.79	-0.1
2,797,754	+				-0.0
2,797,755	-				+0.5
2,797,950	+		MPMX19_02677	0.36	-0.5
2,797,950	+		MPMX19_02677	0.36	-0.7
2,797,950	+		MPMX19_02677	0.36	-0.0
2,797,951	-		MPMX19_02677	0.36	-0.9
2,797,951	-		MPMX19_02677	0.36	+0.2
2,797,951	-		MPMX19_02677	0.36	+0.5
2,797,951	-		MPMX19_02677	0.36	-0.9
2,797,951	-		MPMX19_02677	0.36	-0.6
2,797,951	-		MPMX19_02677	0.36	-0.1
2,797,951	-		MPMX19_02677	0.36	+0.1
2,797,951	-		MPMX19_02677	0.36	+0.5
2,798,100	+		MPMX19_02677	0.79	-0.8
2,798,100	+		MPMX19_02677	0.79	-1.7
2,798,100	+		MPMX19_02677	0.79	+0.1
2,798,100	+		MPMX19_02677	0.79	-0.4
2,798,101	-		MPMX19_02677	0.79	+1.1
2,798,101	-		MPMX19_02677	0.79	-0.7
2,798,101	-		MPMX19_02677	0.79	-0.4
2,798,101	-		MPMX19_02677	0.79	+0.7
2,798,101	-		MPMX19_02677	0.79	+0.4
2,798,101	-		MPMX19_02677	0.79	-0.8
2,798,101	-		MPMX19_02677	0.79	-2.9
2,798,101	-		MPMX19_02677	0.79	-0.6
2,798,101	-		MPMX19_02677	0.79	-0.9
2,798,154	+				-0.4
2,798,154	+				-1.0
2,798,154	+				-0.6
2,798,154	+				+0.7
2,798,154	+				-0.4
2,798,154	+				+0.5
2,798,154	+				-1.2
2,798,154	+				-1.6
2,798,154	+				+0.4
2,798,154	+				-0.5
2,798,154	+				+0.7
2,798,154	+				+0.5
2,798,154	+				-1.0
2,798,154	+				-3.3
2,798,154	+				-1.7
2,798,154	+				-0.2
2,798,154	+				+0.1
2,798,154	+				+0.2
2,798,154	+				-0.2
2,798,154	+				+0.1
2,798,154	+				-0.3
2,798,154	+				-0.6
2,798,154	+				-0.8
2,798,154	+				+0.4
2,798,154	+				-0.2
2,798,154	+				-1.3
2,798,154	+				-2.7
2,798,154	+				-0.8
2,798,154	+				-0.9
2,798,155	-				-0.1
2,798,155	-				-0.5
2,798,155	-				-0.7
2,798,155	-				-0.9
2,798,155	-				-0.5
2,798,155	-				+0.4
2,798,155	-				+0.9
2,798,155	-				+0.4
2,798,155	-				+0.1
2,798,155	-				+1.1
2,798,155	-				+0.1
2,798,155	-				+0.0
2,798,155	-				+0.3
2,798,155	-				-1.0
2,798,155	-				-1.1
2,798,155	-				+1.4
2,798,155	-				-0.7
2,798,155	-				+0.7
2,798,155	-				-0.1
2,798,155	-				+0.3
2,798,210	+				+0.6
2,798,210	+				+0.6
2,798,210	+				-0.3
2,798,210	+				-0.7
2,798,210	+				-2.5
2,798,210	+				-1.1
2,798,210	+				-0.3
2,798,210	+				+0.5
2,798,210	+				-0.6
2,798,211	-				-1.0
2,798,211	-				-1.1
2,798,211	-				-0.5
2,798,211	-				-0.0
2,798,211	-				-0.7
2,798,211	-				-0.0
2,798,211	-				+0.3
2,798,211	-				-0.5
2,798,855	+				-0.4
2,798,856	-				+0.6
2,798,856	-				-0.0
2,798,857	+				+0.1
2,798,857	+				+1.5
2,798,858	-				+0.1
2,798,858	-				-0.3
2,798,862	+				+0.3
2,798,862	+				-1.3
2,798,863	-				-0.5
2,798,883	-				-1.1
2,798,915	-				-0.4
2,799,057	+				+0.4
2,799,057	+				-0.4
2,799,057	+				-0.1
2,799,057	+				+0.7
2,799,058	-				+0.1
2,799,228	+		MPMX19_02679	0.33	-0.5
2,799,228	+		MPMX19_02679	0.33	+1.0
2,799,228	+		MPMX19_02679	0.33	-1.1
2,799,228	+		MPMX19_02679	0.33	+0.3
2,799,228	+		MPMX19_02679	0.33	-1.0
2,799,228	+		MPMX19_02679	0.33	-1.4
2,799,228	+		MPMX19_02679	0.33	-0.4
2,799,229	-		MPMX19_02679	0.34	+0.1
2,799,229	-		MPMX19_02679	0.34	-0.4
2,799,229	-		MPMX19_02679	0.34	-0.5
2,799,229	-		MPMX19_02679	0.34	-0.6
2,799,229	-		MPMX19_02679	0.34	+0.5