Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02648

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
2,762,788	+		MPMX19_02646	0.40	-1.2
2,762,788	+		MPMX19_02646	0.40	+0.5
2,762,858	-		MPMX19_02646	0.60	-2.2
2,762,858	-		MPMX19_02646	0.60	-0.7
2,762,878	+		MPMX19_02646	0.66	-0.7
2,762,878	+		MPMX19_02646	0.66	-0.6
2,762,878	+		MPMX19_02646	0.66	+0.7
2,762,878	+		MPMX19_02646	0.66	-0.5
2,762,879	-		MPMX19_02646	0.66	+0.4
2,762,879	-		MPMX19_02646	0.66	+0.9
2,762,879	-		MPMX19_02646	0.66	-1.6
2,762,995	+				+0.4
2,762,995	+				-0.4
2,762,995	+				+0.7
2,762,996	-				-1.4
2,762,996	-				-0.5
2,762,996	-				+0.1
2,762,996	-				+0.5
2,763,153	+		MPMX19_02647	0.21	+0.2
2,763,153	+		MPMX19_02647	0.21	-0.5
2,763,153	+		MPMX19_02647	0.21	+0.1
2,763,153	+		MPMX19_02647	0.21	-0.4
2,763,153	+		MPMX19_02647	0.21	+1.7
2,763,153	+		MPMX19_02647	0.21	-0.7
2,763,153	+		MPMX19_02647	0.21	-1.4
2,763,154	-		MPMX19_02647	0.21	+0.5
2,763,154	-		MPMX19_02647	0.21	+0.7
2,763,154	-		MPMX19_02647	0.21	+0.7
2,763,206	+		MPMX19_02647	0.30	-0.2
2,763,206	+		MPMX19_02647	0.30	+0.0
2,763,206	+		MPMX19_02647	0.30	+0.5
2,763,206	+		MPMX19_02647	0.30	+0.7
2,763,206	+		MPMX19_02647	0.30	-0.5
2,763,206	+		MPMX19_02647	0.30	+0.4
2,763,206	+		MPMX19_02647	0.30	+0.7
2,763,206	+		MPMX19_02647	0.30	-0.3
2,763,207	-		MPMX19_02647	0.30	-1.5
2,763,207	-		MPMX19_02647	0.30	+0.7
2,763,207	-		MPMX19_02647	0.30	-0.8
2,763,207	-		MPMX19_02647	0.30	-0.3
2,763,207	-		MPMX19_02647	0.30	-0.0
2,763,210	+		MPMX19_02647	0.31	-1.0
2,763,210	+		MPMX19_02647	0.31	-0.7
2,763,210	+		MPMX19_02647	0.31	-0.1
2,763,210	+		MPMX19_02647	0.31	+0.7
2,763,211	-		MPMX19_02647	0.31	+1.6
2,763,211	-		MPMX19_02647	0.31	+0.0
2,763,211	-		MPMX19_02647	0.31	-0.5
2,763,225	+		MPMX19_02647	0.33	+0.8
2,763,225	+		MPMX19_02647	0.33	-0.6
2,763,225	+		MPMX19_02647	0.33	+2.4
2,763,225	+		MPMX19_02647	0.33	-0.8
2,763,225	+		MPMX19_02647	0.33	-1.1
2,763,226	-		MPMX19_02647	0.33	-0.4
2,763,226	-		MPMX19_02647	0.33	+1.0
2,763,226	-		MPMX19_02647	0.33	+1.0
2,763,226	-		MPMX19_02647	0.33	-0.2
2,763,226	-		MPMX19_02647	0.33	-0.2
2,763,226	-		MPMX19_02647	0.33	-0.9
2,763,226	-		MPMX19_02647	0.33	+0.2
2,763,226	-		MPMX19_02647	0.33	+0.1
2,763,226	-		MPMX19_02647	0.33	-1.3
2,763,345	+		MPMX19_02647	0.53	+1.3
2,763,345	+		MPMX19_02647	0.53	-1.5
2,763,345	+		MPMX19_02647	0.53	-0.5
2,763,345	+		MPMX19_02647	0.53	-0.9
2,763,346	-		MPMX19_02647	0.53	-0.1
2,763,346	-		MPMX19_02647	0.53	-0.9
2,763,387	+		MPMX19_02647	0.59	-0.3
2,763,387	+		MPMX19_02647	0.59	+0.3
2,763,387	+		MPMX19_02647	0.59	-0.1
2,763,387	+		MPMX19_02647	0.59	-0.5
2,763,387	+		MPMX19_02647	0.59	-0.5
2,763,387	+		MPMX19_02647	0.59	-0.4
2,763,388	-		MPMX19_02647	0.60	+1.2
2,763,388	-		MPMX19_02647	0.60	+0.8
2,763,388	-		MPMX19_02647	0.60	-0.0
2,763,388	-		MPMX19_02647	0.60	-1.3
2,763,388	-		MPMX19_02647	0.60	-0.9
2,763,388	-		MPMX19_02647	0.60	-0.2
2,763,703	+		MPMX19_02648	0.10	-0.5
2,763,703	+		MPMX19_02648	0.10	-1.0
2,763,703	+		MPMX19_02648	0.10	-1.1
2,763,704	-		MPMX19_02648	0.10	+0.2
2,763,704	-		MPMX19_02648	0.10	-0.3
2,763,704	-		MPMX19_02648	0.10	-0.2
2,763,704	-		MPMX19_02648	0.10	-1.6
2,763,704	-		MPMX19_02648	0.10	-1.2
2,763,704	-		MPMX19_02648	0.10	-0.2
2,763,743	+		MPMX19_02648	0.16	+0.4
2,763,743	+		MPMX19_02648	0.16	-1.5
2,763,743	+		MPMX19_02648	0.16	+0.7
2,763,743	+		MPMX19_02648	0.16	+1.0
2,763,743	+		MPMX19_02648	0.16	-0.7
2,763,743	+		MPMX19_02648	0.16	+1.0
2,763,743	+		MPMX19_02648	0.16	+0.4
2,763,744	-		MPMX19_02648	0.16	-0.3
2,763,744	-		MPMX19_02648	0.16	-0.1
2,763,744	-		MPMX19_02648	0.16	+0.1
2,763,744	-		MPMX19_02648	0.16	-0.2
2,763,744	-		MPMX19_02648	0.16	-0.6
2,763,744	-		MPMX19_02648	0.16	-1.3
2,763,744	-		MPMX19_02648	0.16	+0.0
2,763,744	-		MPMX19_02648	0.16	+0.3
2,763,744	-		MPMX19_02648	0.16	-0.7
2,763,744	-		MPMX19_02648	0.16	+0.4
2,763,745	+		MPMX19_02648	0.16	-1.0
2,763,745	+		MPMX19_02648	0.16	+0.1
2,763,745	+		MPMX19_02648	0.16	-0.6
2,763,745	+		MPMX19_02648	0.16	+0.9
2,763,745	+		MPMX19_02648	0.16	-0.9
2,763,745	+		MPMX19_02648	0.16	-0.3
2,763,745	+		MPMX19_02648	0.16	-0.3
2,763,745	+		MPMX19_02648	0.16	-0.1
2,763,745	+		MPMX19_02648	0.16	-0.3
2,763,745	+		MPMX19_02648	0.16	+0.3
2,763,745	+		MPMX19_02648	0.16	-1.0
2,763,745	+		MPMX19_02648	0.16	+0.4
2,763,745	+		MPMX19_02648	0.16	+0.7
2,763,745	+		MPMX19_02648	0.16	-0.3
2,763,745	+		MPMX19_02648	0.16	+0.5
2,763,745	+		MPMX19_02648	0.16	+0.5
2,763,746	-		MPMX19_02648	0.16	-2.4
2,763,746	-		MPMX19_02648	0.16	+0.7
2,763,790	+		MPMX19_02648	0.22	-1.1
2,763,790	+		MPMX19_02648	0.22	+1.0
2,763,790	+		MPMX19_02648	0.22	+0.3
2,763,790	+		MPMX19_02648	0.22	-0.3
2,763,791	-		MPMX19_02648	0.22	-1.3
2,763,791	-		MPMX19_02648	0.22	+0.5
2,763,791	-		MPMX19_02648	0.22	+0.1
2,763,791	-		MPMX19_02648	0.22	-0.9
2,763,791	-		MPMX19_02648	0.22	+0.3
2,763,865	+		MPMX19_02648	0.32	-1.2
2,763,865	+		MPMX19_02648	0.32	+0.1
2,763,865	+		MPMX19_02648	0.32	+0.3
2,763,866	-		MPMX19_02648	0.32	-0.6
2,763,866	-		MPMX19_02648	0.32	+0.8
2,763,866	-		MPMX19_02648	0.32	-0.2
2,763,866	-		MPMX19_02648	0.32	-0.2
2,763,866	-		MPMX19_02648	0.32	+0.3
2,763,866	-		MPMX19_02648	0.32	+0.1
2,763,866	-		MPMX19_02648	0.32	+0.4
2,763,866	-		MPMX19_02648	0.32	-0.7
2,763,866	-		MPMX19_02648	0.32	-0.1
2,764,174	+		MPMX19_02648	0.74	-0.2
2,764,174	+		MPMX19_02648	0.74	+0.7
2,764,174	+		MPMX19_02648	0.74	+0.4
2,764,174	+		MPMX19_02648	0.74	-0.1
2,764,174	+		MPMX19_02648	0.74	-0.0
2,764,174	+		MPMX19_02648	0.74	-0.5
2,764,175	-		MPMX19_02648	0.74	-0.1
2,764,175	-		MPMX19_02648	0.74	-0.4
2,764,175	-		MPMX19_02648	0.74	-2.1
2,764,175	-		MPMX19_02648	0.74	+0.0
2,764,175	-		MPMX19_02648	0.74	-0.2
2,764,271	-		MPMX19_02648	0.87	-0.1
2,764,379	+				-0.5
2,764,380	-				-0.3
2,764,420	+				+1.0
2,764,420	+				+0.1
2,764,420	+				-1.2
2,764,420	+				-1.1
2,764,420	+				-1.2
2,764,420	+				-0.6
2,764,420	+				-0.5
2,764,420	+				-0.1
2,764,421	-				-0.6
2,764,421	-				-0.6
2,764,421	-				+1.0
2,764,421	-				-0.6
2,764,441	+				+0.1
2,764,441	+				+1.9
2,764,441	+				-0.2
2,764,441	+				-1.7
2,764,441	+				-0.9
2,764,441	+				+0.5
2,764,441	+				-0.8
2,764,442	-				+1.5
2,764,442	-				-1.4
2,764,442	-				-0.6
2,764,609	+		MPMX19_02649	0.28	+0.1
2,764,609	+		MPMX19_02649	0.28	+0.3
2,764,610	-		MPMX19_02649	0.28	+0.1
2,764,610	-		MPMX19_02649	0.28	-0.1
2,764,610	-		MPMX19_02649	0.28	-1.5
2,764,610	-		MPMX19_02649	0.28	+0.9
2,764,610	-		MPMX19_02649	0.28	-0.1
2,764,728	+		MPMX19_02649	0.51	+1.1
2,764,728	+		MPMX19_02649	0.51	-1.1
2,764,728	+		MPMX19_02649	0.51	+0.3
2,764,729	-		MPMX19_02649	0.51	-0.9
2,764,729	-		MPMX19_02649	0.51	+1.2
2,764,855	+		MPMX19_02649	0.76	+0.3
2,764,855	+		MPMX19_02649	0.76	-3.0
2,764,855	+		MPMX19_02649	0.76	+0.1
2,764,855	+		MPMX19_02649	0.76	+2.3
2,764,855	+		MPMX19_02649	0.76	-0.2
2,764,855	+		MPMX19_02649	0.76	-2.2
2,764,855	+		MPMX19_02649	0.76	+1.1
2,764,855	+		MPMX19_02649	0.76	-0.0
2,764,855	+		MPMX19_02649	0.76	-0.1
2,764,855	+		MPMX19_02649	0.76	-0.4
2,764,855	+		MPMX19_02649	0.76	-0.2
2,764,856	-		MPMX19_02649	0.77	+0.9
2,764,856	-		MPMX19_02649	0.77	-0.1
2,764,856	-		MPMX19_02649	0.77	-0.7
2,764,856	-		MPMX19_02649	0.77	+1.1
2,764,856	-		MPMX19_02649	0.77	-1.3
2,764,856	-		MPMX19_02649	0.77	-1.5
2,764,856	-		MPMX19_02649	0.77	+0.5
2,764,858	+		MPMX19_02649	0.77	+0.3
2,764,858	+		MPMX19_02649	0.77	-0.9
2,764,858	+		MPMX19_02649	0.77	-1.1
2,764,858	+		MPMX19_02649	0.77	+0.5
2,764,858	+		MPMX19_02649	0.77	+0.0
2,764,858	+		MPMX19_02649	0.77	+1.1
2,764,858	+		MPMX19_02649	0.77	+1.5
2,764,858	+		MPMX19_02649	0.77	-0.7
2,764,858	+		MPMX19_02649	0.77	-1.7
2,764,858	+		MPMX19_02649	0.77	-0.9
2,764,895	+		MPMX19_02649	0.84	+0.1
2,764,895	+		MPMX19_02649	0.84	-0.2
2,764,895	+		MPMX19_02649	0.84	+1.4
2,764,895	+		MPMX19_02649	0.84	-1.3
2,764,896	-		MPMX19_02649	0.84	-0.7
2,764,896	-		MPMX19_02649	0.84	-0.0
2,764,896	-		MPMX19_02649	0.84	-0.0
2,764,896	-		MPMX19_02649	0.84	+0.8
2,764,896	-		MPMX19_02649	0.84	+1.0
2,764,896	-		MPMX19_02649	0.84	+0.8
2,764,896	-		MPMX19_02649	0.84	-0.6
2,764,896	-		MPMX19_02649	0.84	+0.1
2,764,896	-		MPMX19_02649	0.84	-0.0
2,764,896	-		MPMX19_02649	0.84	+0.2
2,764,896	-		MPMX19_02649	0.84	-0.6
2,764,896	-		MPMX19_02649	0.84	+0.4
2,764,896	-		MPMX19_02649	0.84	-1.6
2,765,003	+				-0.6
2,765,003	+				-0.1
2,765,003	+				+0.7
2,765,003	+				-1.5
2,765,003	+				-0.9
2,765,003	+				+0.9
2,765,003	+				-1.5
2,765,003	+				-0.6
2,765,003	+				-0.2
2,765,003	+				+0.2
2,765,003	+				+0.6
2,765,003	+				-1.2
2,765,003	+				+0.7
2,765,003	+				+0.3
2,765,003	+				+1.1
2,765,003	+				+1.4
2,765,003	+				+0.2
2,765,003	+				-1.3
2,765,003	+				-0.3
2,765,003	+				-1.0
2,765,003	+				-0.8
2,765,003	+				-1.4
2,765,003	+				-0.6
2,765,003	+				+0.1
2,765,003	+				+0.0
2,765,003	+				+1.1
2,765,003	+				+0.6
2,765,003	+				-0.0
2,765,003	+				-0.2
2,765,003	+				-0.9
2,765,003	+				-0.3
2,765,003	+				-0.7
2,765,003	+				-1.1
2,765,003	+				+0.0
2,765,003	+				-0.2
2,765,003	+				-0.2
2,765,003	+				-1.0
2,765,003	+				+0.1
2,765,003	+				-0.5
2,765,003	+				+0.4
2,765,003	+				-0.5
2,765,003	+				-0.9
2,765,003	+				+0.0
2,765,003	+				-0.1
2,765,003	+				-0.0
2,765,003	+				+1.7
2,765,003	+				+0.0
2,765,003	+				-0.8
2,765,003	+				+0.1
2,765,003	+				-1.8
2,765,003	+				-1.0
2,765,003	+				-0.5
2,765,003	+				+0.5
2,765,003	+				-0.6
2,765,003	+				-1.6
2,765,003	+				-0.3
2,765,003	+				-0.7
2,765,003	+				-1.3
2,765,003	+				-0.5
2,765,003	+				+0.1
2,765,003	+				+2.0
2,765,003	+				-0.6
2,765,003	+				-0.9
2,765,003	+				-1.4
2,765,003	+				-0.5
2,765,003	+				-1.3
2,765,003	+				+0.5
2,765,003	+				-0.4
2,765,003	+				-0.6
2,765,003	+				+0.5
2,765,004	-				-0.2
2,765,004	-				-0.5
2,765,004	-				-0.1
2,765,004	-				+0.5
2,765,004	-				+0.4
2,765,004	-				-1.2
2,765,004	-				-0.1
2,765,004	-				-0.1
2,765,004	-				+0.2
2,765,004	-				+0.3
2,765,004	-				-0.5
2,765,004	-				-0.7
2,765,004	-				-0.2
2,765,004	-				+0.1
2,765,004	-				+0.2
2,765,004	-				-0.4
2,765,004	-				-0.5
2,765,004	-				-0.4
2,765,004	-				-1.6
2,765,004	-				-1.6
2,765,004	-				+0.1
2,765,004	-				+0.7
2,765,004	-				+0.5
2,765,004	-				-0.2
2,765,004	-				+0.5
2,765,004	-				+0.8
2,765,004	-				+0.5
2,765,004	-				-0.5
2,765,004	-				+0.6
2,765,004	-				+0.0
2,765,004	-				+0.2
2,765,004	-				-0.6
2,765,004	-				+0.7
2,765,004	-				-2.2
2,765,004	-				-0.1
2,765,004	-				-0.6
2,765,004	-				-1.9
2,765,004	-				+0.3
2,765,004	-				-0.4
2,765,004	-				+0.8
2,765,004	-				-0.5
2,765,004	-				-0.6
2,765,004	-				-1.3
2,765,004	-				-0.1
2,765,004	-				-0.2
2,765,215	+		MPMX19_02650	0.14	-0.7
2,765,215	+		MPMX19_02650	0.14	+0.1
2,765,215	+		MPMX19_02650	0.14	-0.5
2,765,215	+		MPMX19_02650	0.14	-0.6
2,765,215	+		MPMX19_02650	0.14	-0.7
2,765,215	+		MPMX19_02650	0.14	+0.2
2,765,215	+		MPMX19_02650	0.14	+0.3
2,765,215	+		MPMX19_02650	0.14	+0.8
2,765,215	+		MPMX19_02650	0.14	-1.1
2,765,215	+		MPMX19_02650	0.14	+1.0
2,765,215	+		MPMX19_02650	0.14	+0.3
2,765,215	+		MPMX19_02650	0.14	+0.3
2,765,215	+		MPMX19_02650	0.14	+0.2
2,765,215	+		MPMX19_02650	0.14	+0.2
2,765,215	+		MPMX19_02650	0.14	-0.8
2,765,215	+		MPMX19_02650	0.14	-1.1
2,765,215	+		MPMX19_02650	0.14	+0.1
2,765,215	+		MPMX19_02650	0.14	-1.1
2,765,216	-		MPMX19_02650	0.14	-0.1
2,765,216	-		MPMX19_02650	0.14	-0.4
2,765,216	-		MPMX19_02650	0.14	-0.2
2,765,216	-		MPMX19_02650	0.14	-1.1
2,765,216	-		MPMX19_02650	0.14	-0.2
2,765,216	-		MPMX19_02650	0.14	+0.5
2,765,216	-		MPMX19_02650	0.14	+0.6
2,765,216	-		MPMX19_02650	0.14	+0.6
2,765,216	-		MPMX19_02650	0.14	-0.1
2,765,216	-		MPMX19_02650	0.14	-0.2
2,765,216	-		MPMX19_02650	0.14	+0.8
2,765,216	-		MPMX19_02650	0.14	-0.6
2,765,216	-		MPMX19_02650	0.14	-1.2