Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02134

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
2,232,959	+		MPMX19_02132	0.20	-0.8
2,232,959	+		MPMX19_02132	0.20	-0.8
2,232,960	-		MPMX19_02132	0.20	-0.1
2,232,960	-		MPMX19_02132	0.20	-0.6
2,232,960	-		MPMX19_02132	0.20	-2.2
2,232,960	-		MPMX19_02132	0.20	+0.0
2,232,960	-		MPMX19_02132	0.20	+0.2
2,232,960	-		MPMX19_02132	0.20	-0.5
2,232,960	-		MPMX19_02132	0.20	-1.5
2,232,960	-		MPMX19_02132	0.20	+0.3
2,232,960	-		MPMX19_02132	0.20	+0.3
2,233,504	-				-2.1
2,233,571	+				-0.1
2,233,571	+				+0.0
2,233,571	+				-0.1
2,233,571	+				-0.6
2,233,572	-				-0.5
2,233,572	-				-1.0
2,233,572	-				-0.1
2,233,572	-				-0.1
2,233,572	-				-0.2
2,233,617	+				-1.0
2,233,617	+				+0.0
2,233,617	+				-0.4
2,233,627	+				-1.5
2,233,627	+				+1.2
2,233,627	+				+1.1
2,233,627	+				+0.0
2,233,628	-				+0.6
2,233,628	-				-0.4
2,233,628	-				+1.0
2,233,628	-				-0.0
2,233,628	-				+0.5
2,233,628	-				-0.5
2,233,681	+				+0.0
2,233,681	+				-0.4
2,233,682	-				+0.1
2,233,682	-				-1.9
2,233,682	-				-0.2
2,233,682	-				+0.5
2,233,682	-				-1.2
2,233,682	-				-0.2
2,233,682	-				+0.3
2,233,682	-				-1.0
2,233,934	+		MPMX19_02134	0.14	-0.2
2,233,934	+		MPMX19_02134	0.14	-1.2
2,233,934	+		MPMX19_02134	0.14	-0.7
2,233,934	+		MPMX19_02134	0.14	-2.3
2,233,935	-		MPMX19_02134	0.14	-0.7
2,233,935	-		MPMX19_02134	0.14	-0.1
2,233,935	-		MPMX19_02134	0.14	+0.4
2,233,935	-		MPMX19_02134	0.14	+0.3
2,233,935	-		MPMX19_02134	0.14	+0.1
2,233,935	-		MPMX19_02134	0.14	-1.1
2,233,935	-		MPMX19_02134	0.14	+0.8
2,233,935	-		MPMX19_02134	0.14	-0.2
2,234,054	+		MPMX19_02134	0.44	-1.0
2,234,054	+		MPMX19_02134	0.44	-0.5
2,234,054	+		MPMX19_02134	0.44	+0.3
2,234,055	-		MPMX19_02134	0.44	-0.3
2,234,099	+		MPMX19_02134	0.55	-0.8
2,234,099	+		MPMX19_02134	0.55	-1.5
2,234,099	+		MPMX19_02134	0.55	+0.6
2,234,099	+		MPMX19_02134	0.55	-0.2
2,234,099	+		MPMX19_02134	0.55	+1.6
2,234,100	-		MPMX19_02134	0.55	-1.5
2,234,100	-		MPMX19_02134	0.55	-2.3
2,234,100	-		MPMX19_02134	0.55	-0.7
2,234,100	-		MPMX19_02134	0.55	+0.1
2,234,180	+		MPMX19_02134	0.75	-1.2
2,234,181	-		MPMX19_02134	0.75	-3.0
2,234,181	-		MPMX19_02134	0.75	-1.4
2,234,200	+		MPMX19_02134	0.80	+0.9
2,234,201	-		MPMX19_02134	0.80	-1.1
2,234,201	-		MPMX19_02134	0.80	-1.7
2,234,201	-		MPMX19_02134	0.80	+0.8
2,234,201	-		MPMX19_02134	0.80	-1.5
2,234,234	+		MPMX19_02134	0.88	-0.1
2,234,235	-		MPMX19_02134	0.89	-1.8
2,234,235	-		MPMX19_02134	0.89	-0.8
2,234,261	+				-0.4
2,234,324	+				+0.5
2,234,324	+				-2.4
2,234,324	+				-0.8
2,234,325	-				-0.4
2,234,343	+				-1.7
2,234,343	+				-2.2
2,234,343	+				-0.4
2,234,343	+				+0.1
2,234,343	+				+0.4
2,234,343	+				+1.1
2,234,343	+				+0.3
2,234,344	-				+1.8
2,234,344	-				-0.2
2,234,344	-				+0.1
2,234,509	+		MPMX19_02135	0.68	-0.3
2,234,509	+		MPMX19_02135	0.68	-0.2
2,234,509	+		MPMX19_02135	0.68	-0.3
2,234,509	+		MPMX19_02135	0.68	-1.1
2,234,509	+		MPMX19_02135	0.68	+0.2
2,234,509	+		MPMX19_02135	0.68	-0.5
2,234,509	+		MPMX19_02135	0.68	-0.0
2,234,509	+		MPMX19_02135	0.68	-0.6
2,234,509	+		MPMX19_02135	0.68	-0.1
2,234,509	+		MPMX19_02135	0.68	+0.7
2,234,509	+		MPMX19_02135	0.68	+0.6
2,234,509	+		MPMX19_02135	0.68	-0.2
2,234,509	+		MPMX19_02135	0.68	-0.1
2,234,509	+		MPMX19_02135	0.68	+1.4
2,234,509	+		MPMX19_02135	0.68	+0.2
2,234,509	+		MPMX19_02135	0.68	-0.2
2,234,509	+		MPMX19_02135	0.68	+0.2
2,234,509	+		MPMX19_02135	0.68	-0.9
2,234,509	+		MPMX19_02135	0.68	+0.6
2,234,510	-		MPMX19_02135	0.68	-2.2
2,234,510	-		MPMX19_02135	0.68	-0.1
2,234,510	-		MPMX19_02135	0.68	-0.4
2,234,510	-		MPMX19_02135	0.68	-0.6
2,234,510	-		MPMX19_02135	0.68	+0.5
2,234,510	-		MPMX19_02135	0.68	+0.2
2,234,510	-		MPMX19_02135	0.68	+0.4
2,234,510	-		MPMX19_02135	0.68	+1.3
2,234,510	-		MPMX19_02135	0.68	+1.3
2,234,510	-		MPMX19_02135	0.68	-0.1
2,234,510	-		MPMX19_02135	0.68	+0.5
2,234,510	-		MPMX19_02135	0.68	-0.2
2,234,510	-		MPMX19_02135	0.68	+0.4
2,234,510	-		MPMX19_02135	0.68	+1.4
2,234,510	-		MPMX19_02135	0.68	+0.1
2,234,510	-		MPMX19_02135	0.68	+0.8
2,234,510	-		MPMX19_02135	0.68	-1.0
2,234,510	-		MPMX19_02135	0.68	-0.7
2,234,510	-		MPMX19_02135	0.68	+0.2
2,234,510	-		MPMX19_02135	0.68	-1.5
2,234,510	-		MPMX19_02135	0.68	+0.5
2,234,510	-		MPMX19_02135	0.68	+0.2
2,234,599	+				-0.7
2,234,599	+				+0.7
2,234,599	+				-1.2
2,234,599	+				-0.1
2,234,599	+				+0.7
2,234,599	+				-0.4
2,234,599	+				-0.0
2,234,599	+				-0.8
2,234,599	+				+0.4
2,234,599	+				+0.6
2,234,599	+				+0.0
2,234,599	+				+0.5
2,234,599	+				-0.7
2,234,599	+				+0.8
2,234,599	+				+0.8
2,234,599	+				-0.5
2,234,599	+				+0.7
2,234,599	+				-1.1
2,234,599	+				+0.9
2,234,599	+				+0.4
2,234,599	+				+1.2
2,234,599	+				+0.2
2,234,599	+				-1.5
2,234,600	-				-0.8
2,234,600	-				-0.4
2,234,600	-				+0.9
2,234,600	-				-2.1
2,234,600	-				+0.4
2,234,600	-				+0.3
2,234,600	-				-0.5
2,234,600	-				-0.6
2,234,600	-				+0.0
2,234,600	-				-0.7
2,234,600	-				+0.3
2,234,600	-				+0.5
2,234,600	-				+0.3
2,234,600	-				-0.5
2,234,600	-				+0.2
2,234,600	-				-0.9
2,234,600	-				-0.5
2,234,600	-				-0.4
2,234,600	-				-0.4
2,234,600	-				-0.3
2,234,600	-				+0.6
2,234,600	-				+0.8
2,234,600	-				-0.1
2,234,600	-				-1.8
2,234,600	-				-0.4
2,234,600	-				-1.5
2,234,600	-				-0.4
2,234,782	+		MPMX19_02136	0.18	-1.0
2,234,782	+		MPMX19_02136	0.18	-1.0
2,234,782	+		MPMX19_02136	0.18	-1.2