Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01729

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
1,819,185	-				-0.2
1,819,275	+				+0.4
1,819,275	+				+0.2
1,819,282	+				-0.2
1,819,283	-				-0.8
1,819,283	-				-0.5
1,819,389	+		MPMX19_01727	0.20	+0.8
1,819,390	-		MPMX19_01727	0.20	+1.2
1,819,390	-		MPMX19_01727	0.20	-0.4
1,819,632	+		MPMX19_01727	0.62	-1.5
1,819,633	-		MPMX19_01727	0.62	-0.6
1,819,633	-		MPMX19_01727	0.62	-0.1
1,819,633	-		MPMX19_01727	0.62	+0.0
1,819,782	+		MPMX19_01727	0.88	+0.4
1,819,782	+		MPMX19_01727	0.88	-1.6
1,819,783	-		MPMX19_01727	0.88	+1.0
1,819,783	-		MPMX19_01727	0.88	+0.4
1,819,783	-		MPMX19_01727	0.88	-0.7
1,819,783	-		MPMX19_01727	0.88	+1.8
1,819,798	-				-1.8
1,819,798	-				-1.1
1,819,836	+				-1.2
1,819,836	+				-0.1
1,819,836	+				-0.2
1,819,837	-				-0.1
1,819,837	-				-1.8
1,819,837	-				+2.2
1,819,837	-				-0.7
1,819,837	-				-0.3
1,819,837	-				+1.7
1,819,837	-				-0.5
1,819,837	-				-0.2
1,819,837	-				-0.4
1,819,837	-				-1.5
1,819,837	-				+0.8
1,820,094	+		MPMX19_01728	0.87	+0.5
1,820,094	+		MPMX19_01728	0.87	-0.1
1,820,094	+		MPMX19_01728	0.87	-0.1
1,820,094	+		MPMX19_01728	0.87	-0.4
1,820,094	+		MPMX19_01728	0.87	+0.8
1,820,094	+		MPMX19_01728	0.87	-0.1
1,820,094	+		MPMX19_01728	0.87	+0.5
1,820,095	-		MPMX19_01728	0.88	-0.1
1,820,095	-		MPMX19_01728	0.88	-0.2
1,820,095	-		MPMX19_01728	0.88	-1.8
1,820,095	-		MPMX19_01728	0.88	-0.6
1,820,095	-		MPMX19_01728	0.88	+0.7
1,820,095	-		MPMX19_01728	0.88	-0.8
1,820,095	-		MPMX19_01728	0.88	-0.0
1,820,095	-		MPMX19_01728	0.88	-0.5
1,820,095	-		MPMX19_01728	0.88	-0.6
1,820,095	-		MPMX19_01728	0.88	-1.5
1,820,095	-		MPMX19_01728	0.88	+0.3
1,820,095	-		MPMX19_01728	0.88	+0.1
1,820,095	-		MPMX19_01728	0.88	-1.8
1,820,095	-		MPMX19_01728	0.88	+0.2
1,820,095	-		MPMX19_01728	0.88	-1.3
1,820,095	-		MPMX19_01728	0.88	-1.8
1,820,342	+		MPMX19_01729	0.40	+1.2
1,820,342	+		MPMX19_01729	0.40	+1.2
1,820,342	+		MPMX19_01729	0.40	+1.2
1,820,343	-		MPMX19_01729	0.40	+1.0
1,820,343	-		MPMX19_01729	0.40	-0.5
1,820,343	-		MPMX19_01729	0.40	-1.0
1,820,343	-		MPMX19_01729	0.40	+1.5
1,820,343	-		MPMX19_01729	0.40	-0.8
1,820,343	-		MPMX19_01729	0.40	+1.1
1,820,515	-		MPMX19_01729	0.82	+2.0
1,820,619	+				+0.3
1,820,632	+				-0.8
1,820,632	+				-0.0
1,820,633	-				+1.4
1,820,633	-				+1.9
1,820,633	-				+0.1
1,820,641	+				-0.6
1,820,641	+				-0.5
1,820,641	+				+0.0
1,820,641	+				-0.1
1,820,641	+				-0.3
1,820,641	+				+1.8
1,820,641	+				-1.9
1,820,641	+				-1.0
1,820,641	+				-1.7
1,820,641	+				-0.0
1,820,641	+				+0.4
1,820,642	-				-0.9
1,820,642	-				-0.7
1,820,642	-				-0.2
1,820,642	-				+0.0
1,820,642	-				-1.0
1,820,642	-				-0.3
1,820,642	-				-1.0
1,820,642	-				-0.1
1,820,642	-				-1.2
1,820,642	-				-1.4
1,820,642	-				-0.7
1,820,642	-				+0.2
1,820,643	+				-0.9
1,820,643	+				-0.4
1,820,643	+				-0.8
1,820,643	+				+0.7
1,820,643	+				-1.0
1,820,643	+				+0.1
1,820,643	+				+0.5
1,820,643	+				-1.3
1,820,643	+				-1.1
1,820,643	+				-0.2
1,820,643	+				-1.5
1,820,643	+				-1.3
1,820,643	+				-0.0
1,820,643	+				-1.5
1,820,643	+				+0.5
1,820,643	+				-0.8
1,820,643	+				-0.8
1,820,643	+				-0.8
1,820,643	+				-0.7
1,820,643	+				-0.5
1,820,643	+				-1.3
1,820,643	+				-0.9
1,820,643	+				-0.7
1,820,643	+				-1.3
1,820,643	+				-0.9
1,820,643	+				-0.6
1,820,643	+				+0.6
1,820,643	+				-1.0
1,820,643	+				-0.8
1,820,644	-				-0.7
1,820,644	-				+0.5
1,820,644	-				-0.5
1,820,644	-				-0.3
1,820,644	-				+0.5
1,820,644	-				-1.2
1,820,644	-				-0.8
1,820,644	-				-0.6
1,820,644	-				-0.2
1,820,644	-				+0.8
1,820,644	-				-1.0
1,820,644	-				-0.2
1,820,644	-				-0.1
1,820,644	-				+0.5
1,820,644	-				-0.5
1,820,644	-				+0.6
1,820,644	-				-0.6
1,820,644	-				-0.5
1,820,644	-				+0.0
1,820,644	-				-0.5
1,820,644	-				-0.1
1,820,644	-				-0.3
1,820,644	-				-2.0
1,820,644	-				-0.9
1,820,644	-				-0.2
1,820,644	-				-0.6
1,820,644	-				-0.2
1,820,644	-				-1.5
1,821,151	+		MPMX19_01730	0.29	-0.2
1,821,151	+		MPMX19_01730	0.29	+0.1
1,821,151	+		MPMX19_01730	0.29	-2.3
1,821,151	+		MPMX19_01730	0.29	+1.2
1,821,151	+		MPMX19_01730	0.29	+0.1
1,821,151	+		MPMX19_01730	0.29	-0.0
1,821,151	+		MPMX19_01730	0.29	-0.6
1,821,151	+		MPMX19_01730	0.29	+0.8
1,821,151	+		MPMX19_01730	0.29	+0.4
1,821,151	+		MPMX19_01730	0.29	-1.0
1,821,151	+		MPMX19_01730	0.29	+1.0
1,821,151	+		MPMX19_01730	0.29	-2.2
1,821,151	+		MPMX19_01730	0.29	-0.6
1,821,152	-		MPMX19_01730	0.29	-0.7
1,821,152	-		MPMX19_01730	0.29	-1.2
1,821,152	-		MPMX19_01730	0.29	-0.6
1,821,152	-		MPMX19_01730	0.29	-0.6
1,821,152	-		MPMX19_01730	0.29	-0.2
1,821,152	-		MPMX19_01730	0.29	-1.0
1,821,152	-		MPMX19_01730	0.29	-0.1
1,821,152	-		MPMX19_01730	0.29	+0.5
1,821,152	-		MPMX19_01730	0.29	-0.2
1,821,152	-		MPMX19_01730	0.29	-0.3
1,821,152	-		MPMX19_01730	0.29	-0.2
1,821,152	-		MPMX19_01730	0.29	-0.3
1,821,185	+		MPMX19_01730	0.31	-0.1
1,821,185	+		MPMX19_01730	0.31	+0.8
1,821,185	+		MPMX19_01730	0.31	-0.2
1,821,185	+		MPMX19_01730	0.31	-0.9
1,821,185	+		MPMX19_01730	0.31	-1.3
1,821,185	+		MPMX19_01730	0.31	+0.2
1,821,185	+		MPMX19_01730	0.31	-0.7
1,821,185	+		MPMX19_01730	0.31	-0.2
1,821,185	+		MPMX19_01730	0.31	-1.2
1,821,185	+		MPMX19_01730	0.31	-0.4
1,821,185	+		MPMX19_01730	0.31	-0.2
1,821,185	+		MPMX19_01730	0.31	-1.0
1,821,185	+		MPMX19_01730	0.31	-0.3
1,821,185	+		MPMX19_01730	0.31	+0.5
1,821,185	+		MPMX19_01730	0.31	-0.4
1,821,185	+		MPMX19_01730	0.31	+0.1
1,821,185	+		MPMX19_01730	0.31	+0.1
1,821,185	+		MPMX19_01730	0.31	-0.5
1,821,185	+		MPMX19_01730	0.31	-0.5
1,821,185	+		MPMX19_01730	0.31	-1.5
1,821,185	+		MPMX19_01730	0.31	-0.6
1,821,185	+		MPMX19_01730	0.31	-0.3
1,821,186	-		MPMX19_01730	0.31	-0.0
1,821,186	-		MPMX19_01730	0.31	+0.8
1,821,186	-		MPMX19_01730	0.31	-0.9
1,821,186	-		MPMX19_01730	0.31	-1.0
1,821,186	-		MPMX19_01730	0.31	+0.8
1,821,186	-		MPMX19_01730	0.31	+1.3
1,821,186	-		MPMX19_01730	0.31	+0.5
1,821,186	-		MPMX19_01730	0.31	-0.8
1,821,186	-		MPMX19_01730	0.31	+0.3
1,821,186	-		MPMX19_01730	0.31	+0.4
1,821,186	-		MPMX19_01730	0.31	-0.8
1,821,186	-		MPMX19_01730	0.31	+0.2
1,821,186	-		MPMX19_01730	0.31	+0.3
1,821,186	-		MPMX19_01730	0.31	-0.5
1,821,186	-		MPMX19_01730	0.31	-0.3
1,821,186	-		MPMX19_01730	0.31	+0.3
1,821,186	-		MPMX19_01730	0.31	-0.3
1,821,186	-		MPMX19_01730	0.31	-0.3
1,821,186	-		MPMX19_01730	0.31	-0.0
1,821,186	-		MPMX19_01730	0.31	-0.3
1,821,186	-		MPMX19_01730	0.31	-1.0
1,821,186	-		MPMX19_01730	0.31	-0.2
1,821,186	-		MPMX19_01730	0.31	-0.3
1,821,186	-		MPMX19_01730	0.31	-0.1
1,821,186	-		MPMX19_01730	0.31	-0.4
1,821,186	-		MPMX19_01730	0.31	-0.5
1,821,458	+		MPMX19_01730	0.47	+0.4
1,821,458	+		MPMX19_01730	0.47	-0.3
1,821,458	+		MPMX19_01730	0.47	+0.1
1,821,458	+		MPMX19_01730	0.47	-0.0
1,821,458	+		MPMX19_01730	0.47	-1.1
1,821,458	+		MPMX19_01730	0.47	-0.5
1,821,458	+		MPMX19_01730	0.47	+0.4
1,821,458	+		MPMX19_01730	0.47	+0.1
1,821,458	+		MPMX19_01730	0.47	-0.7
1,821,458	+		MPMX19_01730	0.47	-0.7
1,821,458	+		MPMX19_01730	0.47	-0.3
1,821,459	-		MPMX19_01730	0.47	+0.1
1,821,459	-		MPMX19_01730	0.47	-0.7
1,821,459	-		MPMX19_01730	0.47	-0.7
1,821,459	-		MPMX19_01730	0.47	+0.5
1,821,459	-		MPMX19_01730	0.47	+1.5
1,821,459	-		MPMX19_01730	0.47	-0.6
1,821,459	-		MPMX19_01730	0.47	-0.6
1,821,459	-		MPMX19_01730	0.47	+0.8
1,821,459	-		MPMX19_01730	0.47	-1.6
1,821,459	-		MPMX19_01730	0.47	+0.4
1,821,503	+		MPMX19_01730	0.49	+0.3
1,821,503	+		MPMX19_01730	0.49	-0.3
1,821,504	-		MPMX19_01730	0.49	-0.9