Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01181

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
1,220,933	+		MPMX19_01178	0.84	+0.3
1,220,933	+		MPMX19_01178	0.84	+1.3
1,220,934	-		MPMX19_01178	0.84	-0.2
1,220,988	+		MPMX19_01178	0.87	+1.3
1,220,988	+		MPMX19_01178	0.87	-1.1
1,220,988	+		MPMX19_01178	0.87	-0.4
1,220,988	+		MPMX19_01178	0.87	-1.8
1,220,988	+		MPMX19_01178	0.87	-0.9
1,220,988	+		MPMX19_01178	0.87	-1.1
1,220,988	+		MPMX19_01178	0.87	-0.1
1,220,988	+		MPMX19_01178	0.87	+0.6
1,220,988	+		MPMX19_01178	0.87	+0.1
1,220,988	+		MPMX19_01178	0.87	+0.8
1,220,988	+		MPMX19_01178	0.87	-0.4
1,220,988	+		MPMX19_01178	0.87	+0.1
1,220,988	+		MPMX19_01178	0.87	+0.3
1,220,988	+		MPMX19_01178	0.87	-0.6
1,220,988	+		MPMX19_01178	0.87	-0.7
1,220,988	+		MPMX19_01178	0.87	-1.2
1,220,988	+		MPMX19_01178	0.87	-1.3
1,220,988	+		MPMX19_01178	0.87	+0.5
1,220,988	+		MPMX19_01178	0.87	+0.1
1,220,988	+		MPMX19_01178	0.87	+0.6
1,220,988	+		MPMX19_01178	0.87	-2.2
1,220,988	+		MPMX19_01178	0.87	+1.5
1,220,988	+		MPMX19_01178	0.87	+0.8
1,220,988	+		MPMX19_01178	0.87	-0.8
1,220,989	-		MPMX19_01178	0.87	-0.6
1,220,989	-		MPMX19_01178	0.87	-0.8
1,220,989	-		MPMX19_01178	0.87	+0.1
1,220,989	-		MPMX19_01178	0.87	-0.4
1,220,989	-		MPMX19_01178	0.87	+1.2
1,220,989	-		MPMX19_01178	0.87	+0.4
1,220,989	-		MPMX19_01178	0.87	-0.5
1,220,989	-		MPMX19_01178	0.87	+0.7
1,220,989	-		MPMX19_01178	0.87	+0.2
1,220,989	-		MPMX19_01178	0.87	-0.7
1,220,989	-		MPMX19_01178	0.87	+0.4
1,220,989	-		MPMX19_01178	0.87	-0.7
1,220,989	-		MPMX19_01178	0.87	+1.5
1,220,989	-		MPMX19_01178	0.87	+0.1
1,220,989	-		MPMX19_01178	0.87	+1.3
1,220,989	-		MPMX19_01178	0.87	-0.1
1,220,989	-		MPMX19_01178	0.87	-2.2
1,220,989	-		MPMX19_01178	0.87	+0.7
1,220,989	-		MPMX19_01178	0.87	-0.5
1,220,989	-		MPMX19_01178	0.87	-1.1
1,220,989	-		MPMX19_01178	0.87	+0.0
1,220,989	-		MPMX19_01178	0.87	+0.8
1,220,989	-		MPMX19_01178	0.87	+0.0
1,220,990	+		MPMX19_01178	0.87	+0.4
1,220,990	+		MPMX19_01178	0.87	+0.3
1,220,990	+		MPMX19_01178	0.87	-0.3
1,220,990	+		MPMX19_01178	0.87	+0.8
1,220,990	+		MPMX19_01178	0.87	+0.9
1,220,990	+		MPMX19_01178	0.87	+0.9
1,220,991	-		MPMX19_01178	0.87	-1.3
1,220,991	-		MPMX19_01178	0.87	+0.7
1,220,991	-		MPMX19_01178	0.87	-0.6
1,221,163	+				-1.2
1,221,164	-				-1.3
1,221,164	-				+1.5
1,221,164	-				-0.0
1,221,234	+				-0.8
1,221,234	+				-0.3
1,221,235	-				+1.9
1,221,385	+		MPMX19_01179	0.35	-0.5
1,221,987	+				+0.4
1,221,987	+				-1.1
1,221,987	+				-1.7
1,221,987	+				+0.5
1,221,987	+				-0.5
1,221,987	+				+1.4
1,221,987	+				+0.1
1,221,987	+				+0.5
1,221,987	+				-0.6
1,221,988	-				-0.4
1,221,988	-				+0.6
1,221,988	-				-1.2
1,221,988	-				+0.5
1,221,988	-				+0.0
1,221,988	-				-2.0
1,221,988	-				-0.3
1,221,993	+				-0.7
1,221,993	+				+0.1
1,221,993	+				-0.7
1,221,993	+				+0.3
1,221,994	-				+0.7
1,221,994	-				-2.5
1,221,994	-				-2.5
1,222,016	+				-0.8
1,222,016	+				+0.1
1,222,016	+				-1.1
1,222,016	+				-0.3
1,222,016	+				-0.6
1,222,016	+				+0.4
1,222,016	+				-1.0
1,222,016	+				-0.3
1,222,016	+				-0.2
1,222,016	+				+0.3
1,222,016	+				-0.5
1,222,016	+				+0.1
1,222,016	+				-0.5
1,222,016	+				-0.5
1,222,016	+				+0.5
1,222,016	+				-0.6
1,222,017	-				-0.7
1,222,017	-				-0.6
1,222,017	-				-0.1
1,222,017	-				+0.6
1,222,017	-				-0.2
1,222,017	-				+0.9
1,222,017	-				-0.3
1,222,017	-				-0.4
1,222,017	-				-0.2
1,222,017	-				+0.5
1,222,017	-				-0.5
1,222,017	-				-0.4
1,222,017	-				+0.8
1,222,017	-				-0.9
1,222,017	-				+2.7
1,222,017	-				+0.4
1,222,103	+		MPMX19_01181	0.13	+0.0
1,222,190	+		MPMX19_01181	0.18	-0.2
1,222,191	-		MPMX19_01181	0.18	+1.1
1,222,246	-		MPMX19_01181	0.21	+0.3
1,222,246	-		MPMX19_01181	0.21	-0.5
1,222,469	+		MPMX19_01181	0.34	-0.7
1,222,469	+		MPMX19_01181	0.34	+1.1
1,222,826	+		MPMX19_01181	0.55	-0.8
1,222,826	+		MPMX19_01181	0.55	+0.3
1,222,826	+		MPMX19_01181	0.55	-0.6
1,222,826	+		MPMX19_01181	0.55	+0.5
1,222,826	+		MPMX19_01181	0.55	-0.0
1,222,826	+		MPMX19_01181	0.55	+0.1
1,222,826	+		MPMX19_01181	0.55	+1.2
1,222,826	+		MPMX19_01181	0.55	-0.7
1,222,826	+		MPMX19_01181	0.55	+0.1
1,222,826	+		MPMX19_01181	0.55	+0.2
1,222,826	+		MPMX19_01181	0.55	+0.5
1,222,826	+		MPMX19_01181	0.55	-0.6
1,222,826	+		MPMX19_01181	0.55	-0.1
1,222,826	+		MPMX19_01181	0.55	+0.2
1,222,826	+		MPMX19_01181	0.55	-0.9
1,222,826	+		MPMX19_01181	0.55	+1.0
1,222,826	+		MPMX19_01181	0.55	-1.7
1,222,826	+		MPMX19_01181	0.55	-0.3
1,222,826	+		MPMX19_01181	0.55	-1.7
1,222,826	+		MPMX19_01181	0.55	-0.7
1,222,826	+		MPMX19_01181	0.55	-0.1
1,222,827	-		MPMX19_01181	0.55	+0.2
1,222,827	-		MPMX19_01181	0.55	-0.2
1,222,827	-		MPMX19_01181	0.55	-0.8
1,222,827	-		MPMX19_01181	0.55	+0.0
1,222,827	-		MPMX19_01181	0.55	-0.1
1,222,827	-		MPMX19_01181	0.55	-1.1
1,222,827	-		MPMX19_01181	0.55	+1.3
1,222,827	-		MPMX19_01181	0.55	-1.3
1,222,827	-		MPMX19_01181	0.55	+1.1
1,222,827	-		MPMX19_01181	0.55	+0.5
1,222,827	-		MPMX19_01181	0.55	+0.1
1,222,827	-		MPMX19_01181	0.55	+0.8
1,222,827	-		MPMX19_01181	0.55	-1.5
1,222,827	-		MPMX19_01181	0.55	-0.4
1,222,827	-		MPMX19_01181	0.55	-0.3
1,222,827	-		MPMX19_01181	0.55	-2.5
1,222,827	-		MPMX19_01181	0.55	+0.5
1,222,827	-		MPMX19_01181	0.55	+1.1
1,222,827	-		MPMX19_01181	0.55	+0.8
1,222,827	-		MPMX19_01181	0.55	+0.4
1,222,827	-		MPMX19_01181	0.55	+0.2
1,222,827	-		MPMX19_01181	0.55	+2.1
1,222,827	-		MPMX19_01181	0.55	+0.2
1,222,827	-		MPMX19_01181	0.55	+0.2
1,222,827	-		MPMX19_01181	0.55	-0.2
1,222,827	-		MPMX19_01181	0.55	-1.7
1,222,827	-		MPMX19_01181	0.55	-1.1
1,222,848	+		MPMX19_01181	0.57	+0.5
1,222,848	+		MPMX19_01181	0.57	+0.6
1,222,848	+		MPMX19_01181	0.57	+0.6
1,222,848	+		MPMX19_01181	0.57	-0.6
1,222,848	+		MPMX19_01181	0.57	-0.8
1,222,848	+		MPMX19_01181	0.57	-0.3
1,222,848	+		MPMX19_01181	0.57	-2.1
1,222,849	-		MPMX19_01181	0.57	+0.3
1,222,849	-		MPMX19_01181	0.57	+0.4
1,222,849	-		MPMX19_01181	0.57	-1.2
1,222,849	-		MPMX19_01181	0.57	-0.6
1,222,849	-		MPMX19_01181	0.57	-1.8
1,222,937	-		MPMX19_01181	0.62	+0.3
1,223,681	+				-1.8
1,223,682	-				-1.8
1,223,744	+				+0.3
1,223,744	+				-1.3
1,223,745	-				-0.3
1,223,745	-				-1.5
1,223,851	+		MPMX19_01182	0.11	-0.1
1,223,851	+		MPMX19_01182	0.11	-0.1
1,223,851	+		MPMX19_01182	0.11	-0.3
1,223,851	+		MPMX19_01182	0.11	+1.3
1,223,852	-		MPMX19_01182	0.12	-0.0
1,223,852	-		MPMX19_01182	0.12	-0.0
1,223,852	-		MPMX19_01182	0.12	+0.0
1,223,852	-		MPMX19_01182	0.12	-0.0
1,223,852	-		MPMX19_01182	0.12	-1.2
1,223,852	-		MPMX19_01182	0.12	+0.4
1,223,900	+		MPMX19_01182	0.20	-0.5
1,223,900	+		MPMX19_01182	0.20	-1.5
1,223,900	+		MPMX19_01182	0.20	+1.2
1,223,900	+		MPMX19_01182	0.20	-0.5
1,223,900	+		MPMX19_01182	0.20	-1.7
1,223,900	+		MPMX19_01182	0.20	+0.8
1,223,900	+		MPMX19_01182	0.20	-1.3
1,223,900	+		MPMX19_01182	0.20	-0.8
1,223,901	-		MPMX19_01182	0.20	-1.5
1,223,901	-		MPMX19_01182	0.20	-0.8
1,223,901	-		MPMX19_01182	0.20	+1.3
1,223,901	-		MPMX19_01182	0.20	+0.9
1,223,901	-		MPMX19_01182	0.20	-0.7
1,223,901	-		MPMX19_01182	0.20	+0.1
1,223,901	-		MPMX19_01182	0.20	-0.9
1,223,901	-		MPMX19_01182	0.20	-0.8
1,223,901	-		MPMX19_01182	0.20	-0.0
1,223,901	-		MPMX19_01182	0.20	+0.8
1,223,901	-		MPMX19_01182	0.20	+0.2
1,223,901	-		MPMX19_01182	0.20	-0.4
1,223,901	-		MPMX19_01182	0.20	+0.2
1,223,901	-		MPMX19_01182	0.20	+0.1
1,223,901	-		MPMX19_01182	0.20	-0.6
1,223,999	+		MPMX19_01182	0.37	-1.8
1,223,999	+		MPMX19_01182	0.37	-1.8
1,223,999	+		MPMX19_01182	0.37	-0.7
1,223,999	+		MPMX19_01182	0.37	-0.1
1,223,999	+		MPMX19_01182	0.37	-0.2
1,223,999	+		MPMX19_01182	0.37	-0.1
1,223,999	+		MPMX19_01182	0.37	+1.4
1,223,999	+		MPMX19_01182	0.37	-0.0
1,223,999	+		MPMX19_01182	0.37	-0.8
1,223,999	+		MPMX19_01182	0.37	+1.2
1,223,999	+		MPMX19_01182	0.37	+0.0
1,223,999	+		MPMX19_01182	0.37	-1.7
1,224,000	-		MPMX19_01182	0.38	+0.4
1,224,000	-		MPMX19_01182	0.38	-0.9
1,224,000	-		MPMX19_01182	0.38	-0.1
1,224,000	-		MPMX19_01182	0.38	+0.2
1,224,000	-		MPMX19_01182	0.38	-0.7
1,224,000	-		MPMX19_01182	0.38	-0.8
1,224,000	-		MPMX19_01182	0.38	-2.3
1,224,158	+		MPMX19_01182	0.65	-1.0
1,224,158	+		MPMX19_01182	0.65	-0.5
1,224,158	+		MPMX19_01182	0.65	-1.2
1,224,158	+		MPMX19_01182	0.65	+0.5
1,224,158	+		MPMX19_01182	0.65	-0.9
1,224,158	+		MPMX19_01182	0.65	-0.5
1,224,158	+		MPMX19_01182	0.65	+1.1
1,224,158	+		MPMX19_01182	0.65	+0.3
1,224,158	+		MPMX19_01182	0.65	-0.8
1,224,158	+		MPMX19_01182	0.65	-0.7
1,224,158	+		MPMX19_01182	0.65	+0.0
1,224,158	+		MPMX19_01182	0.65	-0.3
1,224,158	+		MPMX19_01182	0.65	-0.8
1,224,158	+		MPMX19_01182	0.65	+1.0
1,224,158	+		MPMX19_01182	0.65	-1.8
1,224,158	+		MPMX19_01182	0.65	+0.3
1,224,158	+		MPMX19_01182	0.65	+1.9
1,224,158	+		MPMX19_01182	0.65	-1.6
1,224,158	+		MPMX19_01182	0.65	+1.1
1,224,158	+		MPMX19_01182	0.65	-0.6
1,224,158	+		MPMX19_01182	0.65	-1.3
1,224,158	+		MPMX19_01182	0.65	-0.9
1,224,158	+		MPMX19_01182	0.65	+0.2
1,224,158	+		MPMX19_01182	0.65	-0.6
1,224,159	-		MPMX19_01182	0.65	-0.8
1,224,159	-		MPMX19_01182	0.65	-0.5
1,224,159	-		MPMX19_01182	0.65	+0.3
1,224,159	-		MPMX19_01182	0.65	+0.8
1,224,159	-		MPMX19_01182	0.65	-1.3
1,224,159	-		MPMX19_01182	0.65	-0.4
1,224,159	-		MPMX19_01182	0.65	-1.2
1,224,159	-		MPMX19_01182	0.65	+0.8
1,224,159	-		MPMX19_01182	0.65	-0.8
1,224,159	-		MPMX19_01182	0.65	-0.5
1,224,159	-		MPMX19_01182	0.65	-0.1
1,224,159	-		MPMX19_01182	0.65	-0.3
1,224,159	-		MPMX19_01182	0.65	+0.1
1,224,159	-		MPMX19_01182	0.65	-0.4
1,224,159	-		MPMX19_01182	0.65	-0.1
1,224,159	-		MPMX19_01182	0.65	+0.7
1,224,159	-		MPMX19_01182	0.65	+0.1
1,224,159	-		MPMX19_01182	0.65	-0.3
1,224,159	-		MPMX19_01182	0.65	-2.1
1,224,159	-		MPMX19_01182	0.65	-0.9
1,224,159	-		MPMX19_01182	0.65	-0.2
1,224,159	-		MPMX19_01182	0.65	-0.7
1,224,159	-		MPMX19_01182	0.65	-0.2
1,224,159	-		MPMX19_01182	0.65	-0.3
1,224,159	-		MPMX19_01182	0.65	-0.3
1,224,163	+		MPMX19_01182	0.66	-2.1
1,224,221	+		MPMX19_01182	0.76	-0.4
1,224,221	+		MPMX19_01182	0.76	-0.9
1,224,221	+		MPMX19_01182	0.76	+0.0
1,224,221	+		MPMX19_01182	0.76	+1.3
1,224,222	-		MPMX19_01182	0.76	+0.1
1,224,222	-		MPMX19_01182	0.76	-0.5
1,224,222	-		MPMX19_01182	0.76	-0.5
1,224,222	-		MPMX19_01182	0.76	+0.3
1,224,222	-		MPMX19_01182	0.76	+0.2
1,224,353	+				-2.0
1,224,353	+				-0.4
1,224,353	+				-1.1
1,224,353	+				+0.0
1,224,354	-				+0.4
1,224,354	-				-0.3
1,224,354	-				+1.2
1,224,354	-				-0.1
1,224,354	-				-0.6
1,224,354	-				-0.0