Experiment: NL-CCM; high oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00155 and MPMX19_00156 are separated by 904 nucleotides
MPMX19_00155: MPMX19_00155 - hypothetical protein, at 163,086 to 163,607
_00155
MPMX19_00156: MPMX19_00156 - hypothetical protein, at 164,512 to 165,792
_00156
Position (kb) 164
165
166 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 163.625 kb on + strand at 163.625 kb on + strand at 163.625 kb on + strand at 163.625 kb on + strand at 163.626 kb on - strand at 163.626 kb on - strand at 163.626 kb on - strand at 163.626 kb on - strand at 163.626 kb on - strand at 163.626 kb on - strand at 163.626 kb on - strand at 163.626 kb on - strand at 163.683 kb on + strand at 163.683 kb on + strand at 163.683 kb on + strand at 163.683 kb on + strand at 163.683 kb on + strand at 163.683 kb on + strand at 163.683 kb on + strand at 163.683 kb on + strand at 163.683 kb on + strand at 163.683 kb on + strand at 163.683 kb on + strand at 163.684 kb on - strand at 163.684 kb on - strand at 163.684 kb on - strand at 163.684 kb on - strand at 163.684 kb on - strand at 163.684 kb on - strand at 163.684 kb on - strand at 163.684 kb on - strand at 163.684 kb on - strand at 163.684 kb on - strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.805 kb on + strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.806 kb on - strand at 163.874 kb on + strand at 163.874 kb on + strand at 163.874 kb on + strand at 163.874 kb on + strand at 163.874 kb on + strand at 163.874 kb on + strand at 163.875 kb on - strand at 163.875 kb on - strand at 163.875 kb on - strand at 163.875 kb on - strand at 163.875 kb on - strand at 163.875 kb on - strand at 163.875 kb on - strand at 163.875 kb on - strand at 163.875 kb on - strand at 163.875 kb on - strand at 163.875 kb on - strand at 163.875 kb on - strand at 163.875 kb on - strand at 163.876 kb on + strand at 163.876 kb on + strand at 163.876 kb on + strand at 163.876 kb on + strand at 163.876 kb on + strand at 163.876 kb on + strand at 163.876 kb on + strand at 163.876 kb on + strand at 163.876 kb on + strand at 163.876 kb on + strand at 163.876 kb on + strand at 163.876 kb on + strand at 163.876 kb on + strand at 163.877 kb on - strand at 163.877 kb on - strand at 163.877 kb on - strand at 163.877 kb on - strand at 163.877 kb on - strand at 163.877 kb on - strand at 163.877 kb on - strand at 163.877 kb on - strand at 163.877 kb on - strand at 163.877 kb on - strand at 163.877 kb on - strand at 163.877 kb on - strand at 163.877 kb on - strand at 163.940 kb on + strand at 163.940 kb on + strand at 163.940 kb on + strand at 163.940 kb on + strand at 163.940 kb on + strand at 163.940 kb on + strand at 163.940 kb on + strand at 163.940 kb on + strand at 163.940 kb on + strand at 163.940 kb on + strand at 163.940 kb on + strand at 163.940 kb on + strand at 163.940 kb on + strand at 163.940 kb on + strand at 163.940 kb on + strand at 163.961 kb on - strand at 163.963 kb on + strand at 163.963 kb on + strand at 163.963 kb on + strand at 163.964 kb on - strand at 163.964 kb on - strand at 163.964 kb on - strand at 163.964 kb on - strand at 163.989 kb on - strand at 163.989 kb on - strand at 163.989 kb on - strand at 163.989 kb on - strand at 163.989 kb on - strand at 163.989 kb on - strand at 163.989 kb on - strand at 163.989 kb on - strand at 163.989 kb on - strand at 163.989 kb on - strand at 163.989 kb on - strand at 163.989 kb on - strand at 163.989 kb on - strand at 163.989 kb on - strand at 163.989 kb on - strand at 163.989 kb on - strand at 163.989 kb on - strand at 164.046 kb on + strand at 164.046 kb on + strand at 164.046 kb on + strand at 164.046 kb on + strand at 164.046 kb on + strand at 164.047 kb on - strand at 164.047 kb on - strand at 164.047 kb on - strand at 164.047 kb on - strand at 164.213 kb on + strand at 164.213 kb on + strand at 164.214 kb on - strand at 164.214 kb on - strand at 164.214 kb on - strand at 164.214 kb on - strand at 164.214 kb on - strand at 164.270 kb on - strand at 164.270 kb on - strand at 164.324 kb on + strand at 164.325 kb on - strand at 164.325 kb on - strand at 164.336 kb on - strand at 164.336 kb on - strand at 164.339 kb on + strand at 164.339 kb on + strand at 164.340 kb on - strand at 164.340 kb on - strand at 164.340 kb on - strand at 164.345 kb on - strand at 164.476 kb on + strand at 164.479 kb on - strand at 164.480 kb on + strand at 164.599 kb on - strand at 164.609 kb on + strand at 164.625 kb on + strand at 164.660 kb on + strand, within MPMX19_00156 at 164.847 kb on + strand, within MPMX19_00156 at 164.848 kb on - strand, within MPMX19_00156 at 164.848 kb on - strand, within MPMX19_00156 at 164.858 kb on + strand, within MPMX19_00156 at 164.965 kb on - strand, within MPMX19_00156 at 165.077 kb on - strand, within MPMX19_00156 at 165.080 kb on + strand, within MPMX19_00156 at 165.086 kb on - strand, within MPMX19_00156 at 165.183 kb on + strand, within MPMX19_00156 at 165.183 kb on + strand, within MPMX19_00156 at 165.304 kb on + strand, within MPMX19_00156 at 165.306 kb on + strand, within MPMX19_00156 at 165.344 kb on + strand, within MPMX19_00156 at 165.351 kb on - strand, within MPMX19_00156 at 165.371 kb on + strand, within MPMX19_00156 at 165.455 kb on + strand, within MPMX19_00156 at 165.456 kb on - strand, within MPMX19_00156 at 165.456 kb on - strand, within MPMX19_00156 at 165.456 kb on - strand, within MPMX19_00156 at 165.456 kb on - strand, within MPMX19_00156 at 165.456 kb on - strand, within MPMX19_00156 at 165.534 kb on + strand, within MPMX19_00156 at 165.538 kb on - strand, within MPMX19_00156 at 165.586 kb on - strand, within MPMX19_00156 at 165.594 kb on + strand, within MPMX19_00156 at 165.728 kb on + strand at 165.793 kb on + strand at 165.887 kb on + strand at 165.887 kb on + strand at 165.887 kb on + strand at 165.887 kb on + strand at 165.945 kb on + strand at 165.945 kb on + strand at 165.946 kb on - strand at 165.946 kb on - strand at 165.946 kb on - strand at 165.962 kb on + strand at 165.962 kb on + strand at 165.962 kb on + strand at 165.962 kb on + strand at 165.963 kb on - strand at 165.963 kb on - strand at 165.963 kb on - strand at 166.048 kb on - strand at 166.082 kb on + strand at 166.082 kb on + strand at 166.083 kb on - strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.163 kb on + strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.164 kb on - strand at 166.366 kb on + strand at 166.367 kb on - strand at 166.367 kb on - strand at 166.367 kb on - strand at 166.376 kb on + strand at 166.376 kb on + strand at 166.376 kb on + strand at 166.377 kb on - strand at 166.377 kb on - strand at 166.377 kb on - strand at 166.377 kb on - strand at 166.377 kb on - strand at 166.377 kb on - strand at 166.377 kb on - strand at 166.377 kb on - strand at 166.377 kb on - strand at 166.377 kb on - strand at 166.377 kb on - strand at 166.473 kb on - strand at 166.487 kb on + strand at 166.487 kb on + strand at 166.487 kb on + strand at 166.487 kb on + strand at 166.487 kb on + strand at 166.487 kb on + strand at 166.487 kb on + strand at 166.488 kb on - strand at 166.488 kb on - strand at 166.488 kb on - strand at 166.488 kb on - strand at 166.509 kb on + strand at 166.510 kb on - strand at 166.510 kb on - strand at 166.510 kb on - strand at 166.567 kb on + strand at 166.567 kb on + strand at 166.567 kb on + strand at 166.567 kb on + strand at 166.567 kb on + strand at 166.568 kb on - strand at 166.568 kb on - strand at 166.568 kb on - strand at 166.568 kb on - strand at 166.568 kb on - strand at 166.568 kb on - strand at 166.568 kb on - strand at 166.568 kb on - strand at 166.568 kb on - strand at 166.568 kb on - strand at 166.568 kb on - strand at 166.568 kb on - strand at 166.613 kb on + strand at 166.613 kb on + strand at 166.613 kb on + strand at 166.614 kb on - strand at 166.622 kb on + strand at 166.622 kb on + strand at 166.622 kb on + strand at 166.623 kb on - strand at 166.623 kb on - strand at 166.637 kb on + strand at 166.682 kb on - strand at 166.682 kb on - strand at 166.690 kb on + strand at 166.691 kb on - strand at 166.702 kb on - strand at 166.716 kb on + strand at 166.716 kb on + strand at 166.716 kb on + strand at 166.716 kb on + strand at 166.716 kb on + strand at 166.717 kb on - strand at 166.717 kb on - strand at 166.717 kb on - strand at 166.742 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; high oxygen remove 163,625 + -0.9 163,625 + -1.5 163,625 + -0.8 163,625 + +1.6 163,626 - -0.9 163,626 - -0.5 163,626 - -1.0 163,626 - +0.2 163,626 - +0.0 163,626 - -0.4 163,626 - -1.1 163,626 - -0.5 163,683 + -0.5 163,683 + -1.2 163,683 + -1.1 163,683 + +1.3 163,683 + -0.7 163,683 + +0.6 163,683 + -1.0 163,683 + +0.5 163,683 + -2.3 163,683 + +0.5 163,683 + -0.4 163,684 - -0.6 163,684 - +0.2 163,684 - -2.5 163,684 - +2.3 163,684 - +1.1 163,684 - +1.0 163,684 - +0.5 163,684 - +0.2 163,684 - +1.0 163,684 - -0.4 163,805 + +0.0 163,805 + -0.3 163,805 + -0.2 163,805 + -0.1 163,805 + -0.8 163,805 + -0.7 163,805 + -0.5 163,805 + -1.0 163,805 + -1.1 163,805 + +1.0 163,805 + -2.1 163,805 + +1.0 163,805 + -1.7 163,805 + -0.2 163,805 + -0.5 163,805 + -0.5 163,805 + -1.3 163,805 + +0.3 163,805 + -0.5 163,805 + -1.8 163,805 + -0.4 163,805 + -0.2 163,805 + +1.1 163,805 + -0.7 163,805 + +0.5 163,805 + -0.1 163,805 + -1.5 163,805 + -1.0 163,805 + +0.2 163,805 + -1.1 163,805 + -1.0 163,805 + -0.0 163,806 - +0.0 163,806 - +0.2 163,806 - -0.5 163,806 - -1.0 163,806 - -0.2 163,806 - -2.5 163,806 - +0.2 163,806 - -0.7 163,806 - -1.2 163,806 - +0.6 163,806 - -0.4 163,806 - -0.9 163,806 - +0.0 163,806 - -0.7 163,806 - -1.3 163,806 - -2.5 163,806 - -1.3 163,806 - -1.4 163,806 - -1.7 163,806 - +0.5 163,806 - +0.3 163,806 - +0.2 163,806 - +0.9 163,806 - -0.4 163,806 - -0.0 163,806 - -0.2 163,806 - -1.5 163,806 - +0.1 163,806 - -2.0 163,806 - -0.5 163,874 + -0.2 163,874 + -1.0 163,874 + -1.3 163,874 + -1.5 163,874 + -0.1 163,874 + -0.3 163,875 - -1.8 163,875 - -1.8 163,875 - +0.4 163,875 - -0.3 163,875 - -0.4 163,875 - +1.6 163,875 - +0.6 163,875 - +1.0 163,875 - -0.8 163,875 - +0.0 163,875 - +0.6 163,875 - -1.3 163,875 - -0.9 163,876 + +0.4 163,876 + +0.2 163,876 + -0.6 163,876 + +0.5 163,876 + -0.1 163,876 + +0.0 163,876 + +0.1 163,876 + -0.5 163,876 + -0.3 163,876 + -1.2 163,876 + -0.7 163,876 + -0.1 163,876 + +0.8 163,877 - -0.7 163,877 - -1.7 163,877 - +0.2 163,877 - +0.6 163,877 - +0.5 163,877 - -0.7 163,877 - -1.2 163,877 - +1.1 163,877 - -1.0 163,877 - +0.0 163,877 - +0.3 163,877 - -0.3 163,877 - +0.6 163,940 + -0.4 163,940 + -0.4 163,940 + +0.4 163,940 + +0.5 163,940 + -0.5 163,940 + -0.8 163,940 + -1.5 163,940 + -0.7 163,940 + +0.3 163,940 + -0.6 163,940 + -0.4 163,940 + +2.6 163,940 + +0.0 163,940 + +0.5 163,940 + -0.7 163,961 - -2.1 163,963 + -1.0 163,963 + -0.1 163,963 + -1.7 163,964 - -0.4 163,964 - -0.7 163,964 - -0.6 163,964 - -0.4 163,989 - +1.6 163,989 - -0.2 163,989 - +2.1 163,989 - +0.6 163,989 - -1.0 163,989 - -1.9 163,989 - -0.2 163,989 - -0.7 163,989 - -1.4 163,989 - -0.2 163,989 - +0.4 163,989 - +1.0 163,989 - -0.8 163,989 - +0.1 163,989 - -0.0 163,989 - +0.9 163,989 - +0.0 164,046 + +0.3 164,046 + -1.2 164,046 + -1.4 164,046 + -0.0 164,046 + -0.8 164,047 - -1.7 164,047 - -0.5 164,047 - +0.9 164,047 - -0.7 164,213 + -1.7 164,213 + -1.9 164,214 - -0.1 164,214 - -0.2 164,214 - -0.6 164,214 - -1.0 164,214 - -0.3 164,270 - +0.4 164,270 - +0.1 164,324 + -0.2 164,325 - -1.1 164,325 - -0.9 164,336 - -1.0 164,336 - +0.6 164,339 + -0.2 164,339 + -0.5 164,340 - -0.9 164,340 - -1.3 164,340 - -0.1 164,345 - +0.8 164,476 + -1.4 164,479 - -1.7 164,480 + +0.6 164,599 - -0.6 164,609 + -1.3 164,625 + -0.2 164,660 + MPMX19_00156 0.12 +1.0 164,847 + MPMX19_00156 0.26 +0.5 164,848 - MPMX19_00156 0.26 +0.5 164,848 - MPMX19_00156 0.26 +0.0 164,858 + MPMX19_00156 0.27 +0.5 164,965 - MPMX19_00156 0.35 -1.0 165,077 - MPMX19_00156 0.44 +1.0 165,080 + MPMX19_00156 0.44 +1.2 165,086 - MPMX19_00156 0.45 -1.0 165,183 + MPMX19_00156 0.52 -1.2 165,183 + MPMX19_00156 0.52 -0.8 165,304 + MPMX19_00156 0.62 -1.2 165,306 + MPMX19_00156 0.62 -1.4 165,344 + MPMX19_00156 0.65 -0.7 165,351 - MPMX19_00156 0.65 -1.0 165,371 + MPMX19_00156 0.67 -1.4 165,455 + MPMX19_00156 0.74 -0.5 165,456 - MPMX19_00156 0.74 -1.8 165,456 - MPMX19_00156 0.74 -0.2 165,456 - MPMX19_00156 0.74 +0.8 165,456 - MPMX19_00156 0.74 -1.7 165,456 - MPMX19_00156 0.74 -1.3 165,534 + MPMX19_00156 0.80 -2.2 165,538 - MPMX19_00156 0.80 -0.5 165,586 - MPMX19_00156 0.84 -0.2 165,594 + MPMX19_00156 0.84 -1.4 165,728 + -0.2 165,793 + -0.6 165,887 + -0.4 165,887 + +0.0 165,887 + +0.0 165,887 + -0.1 165,945 + -0.4 165,945 + -1.1 165,946 - -1.7 165,946 - -0.7 165,946 - -1.5 165,962 + -1.0 165,962 + +1.6 165,962 + -0.2 165,962 + -1.4 165,963 - +0.6 165,963 - +0.0 165,963 - -0.1 166,048 - +0.0 166,082 + +0.5 166,082 + +0.0 166,083 - -0.4 166,163 + -0.7 166,163 + -0.2 166,163 + -0.2 166,163 + +0.3 166,163 + -1.7 166,163 + -0.1 166,163 + +0.0 166,163 + -1.1 166,163 + +0.6 166,163 + -0.6 166,163 + +1.3 166,163 + +0.2 166,163 + +0.2 166,163 + -0.7 166,163 + -0.7 166,163 + -0.7 166,163 + -0.2 166,163 + +1.2 166,163 + -1.8 166,163 + +0.6 166,163 + -0.5 166,163 + +1.2 166,163 + -0.6 166,163 + -1.0 166,163 + -0.2 166,163 + -0.2 166,163 + +0.1 166,163 + +0.6 166,163 + +0.5 166,163 + +0.2 166,163 + +0.4 166,163 + -0.1 166,163 + -0.5 166,163 + -1.2 166,163 + -1.0 166,163 + +0.9 166,163 + -0.9 166,164 - -0.4 166,164 - +1.2 166,164 - +0.4 166,164 - -0.6 166,164 - -1.2 166,164 - -0.1 166,164 - +0.6 166,164 - -1.0 166,164 - +1.1 166,164 - -0.0 166,164 - +1.0 166,164 - +2.2 166,164 - +0.5 166,164 - +1.2 166,164 - +0.2 166,164 - -0.4 166,164 - -0.4 166,164 - -0.1 166,164 - -1.0 166,164 - +0.2 166,164 - +0.0 166,164 - -0.3 166,164 - -1.2 166,164 - +0.2 166,164 - -0.7 166,164 - +1.2 166,164 - +0.6 166,366 + -0.7 166,367 - +1.9 166,367 - -2.9 166,367 - -0.4 166,376 + +1.0 166,376 + -0.2 166,376 + -1.7 166,377 - -0.7 166,377 - -0.0 166,377 - -0.4 166,377 - +0.2 166,377 - +0.3 166,377 - -1.4 166,377 - +1.2 166,377 - +0.8 166,377 - -0.4 166,377 - +1.2 166,377 - +0.0 166,473 - -1.8 166,487 + -1.2 166,487 + -0.1 166,487 + -0.2 166,487 + -0.6 166,487 + -2.1 166,487 + -0.2 166,487 + -0.7 166,488 - -1.4 166,488 - +0.0 166,488 - -1.2 166,488 - -1.4 166,509 + -0.6 166,510 - -0.8 166,510 - -1.4 166,510 - +1.0 166,567 + -0.4 166,567 + -1.7 166,567 + -0.1 166,567 + +1.1 166,567 + +0.8 166,568 - -0.3 166,568 - -0.7 166,568 - +1.0 166,568 - +1.0 166,568 - -1.5 166,568 - +0.6 166,568 - -0.7 166,568 - +0.4 166,568 - -0.8 166,568 - +0.0 166,568 - +0.6 166,568 - -0.1 166,613 + -0.7 166,613 + +0.6 166,613 + -1.1 166,614 - -0.7 166,622 + -0.7 166,622 + -0.5 166,622 + +0.6 166,623 - +1.1 166,623 - -1.8 166,637 + -0.2 166,682 - -1.4 166,682 - -1.1 166,690 + -1.8 166,691 - +0.3 166,702 - -1.1 166,716 + +0.0 166,716 + -2.5 166,716 + -1.2 166,716 + -0.8 166,716 + -0.8 166,717 - -0.6 166,717 - -2.5 166,717 - +0.4 166,742 - -2.4
Or see this region's nucleotide sequence