Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS06025 and ABZR88_RS06030 are separated by 42 nucleotides ABZR88_RS06030 and ABZR88_RS06035 are separated by 14 nucleotides
ABZR88_RS06025: ABZR88_RS06025 - fasciclin domain-containing protein, at 1,471,718 to 1,473,451
_RS06025
ABZR88_RS06030: ABZR88_RS06030 - fasciclin domain-containing protein, at 1,473,494 to 1,475,068
_RS06030
ABZR88_RS06035: ABZR88_RS06035 - SusC/RagA family TonB-linked outer membrane protein, at 1,475,083 to 1,478,313
_RS06035
Position (kb)
1473
1474
1475
1476 Strain fitness (log2 ratio)
-1
0
1 at 1472.517 kb on + strand, within ABZR88_RS06025 at 1472.637 kb on + strand, within ABZR88_RS06025 at 1472.654 kb on - strand, within ABZR88_RS06025 at 1472.670 kb on + strand, within ABZR88_RS06025 at 1472.730 kb on + strand, within ABZR88_RS06025 at 1472.750 kb on + strand, within ABZR88_RS06025 at 1472.752 kb on + strand, within ABZR88_RS06025 at 1472.753 kb on - strand, within ABZR88_RS06025 at 1472.858 kb on - strand, within ABZR88_RS06025 at 1472.966 kb on - strand, within ABZR88_RS06025 at 1472.976 kb on - strand, within ABZR88_RS06025 at 1473.003 kb on + strand, within ABZR88_RS06025 at 1473.004 kb on - strand, within ABZR88_RS06025 at 1473.120 kb on + strand, within ABZR88_RS06025 at 1473.344 kb on - strand at 1473.344 kb on - strand at 1473.457 kb on + strand at 1473.458 kb on - strand at 1473.458 kb on - strand at 1473.580 kb on + strand at 1473.610 kb on + strand at 1473.650 kb on - strand at 1473.822 kb on - strand, within ABZR88_RS06030 at 1473.914 kb on - strand, within ABZR88_RS06030 at 1473.916 kb on + strand, within ABZR88_RS06030 at 1473.933 kb on - strand, within ABZR88_RS06030 at 1473.938 kb on - strand, within ABZR88_RS06030 at 1474.064 kb on + strand, within ABZR88_RS06030 at 1474.072 kb on + strand, within ABZR88_RS06030 at 1474.073 kb on - strand, within ABZR88_RS06030 at 1474.204 kb on + strand, within ABZR88_RS06030 at 1474.209 kb on - strand, within ABZR88_RS06030 at 1474.259 kb on - strand, within ABZR88_RS06030 at 1474.458 kb on - strand, within ABZR88_RS06030 at 1474.458 kb on - strand, within ABZR88_RS06030 at 1474.679 kb on - strand, within ABZR88_RS06030 at 1474.735 kb on + strand, within ABZR88_RS06030 at 1474.782 kb on + strand, within ABZR88_RS06030 at 1474.845 kb on - strand, within ABZR88_RS06030 at 1474.874 kb on + strand, within ABZR88_RS06030 at 1474.978 kb on + strand at 1474.981 kb on + strand at 1475.045 kb on - strand at 1475.218 kb on - strand at 1475.218 kb on - strand at 1475.621 kb on + strand, within ABZR88_RS06035 at 1475.727 kb on + strand, within ABZR88_RS06035 at 1475.755 kb on - strand, within ABZR88_RS06035 at 1475.850 kb on + strand, within ABZR88_RS06035 at 1475.851 kb on - strand, within ABZR88_RS06035 at 1475.855 kb on - strand, within ABZR88_RS06035 at 1476.027 kb on + strand, within ABZR88_RS06035 at 1476.027 kb on + strand, within ABZR88_RS06035
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 1,472,517 + ABZR88_RS06025 0.46 +0.1 1,472,637 + ABZR88_RS06025 0.53 +0.1 1,472,654 - ABZR88_RS06025 0.54 -0.2 1,472,670 + ABZR88_RS06025 0.55 +0.3 1,472,730 + ABZR88_RS06025 0.58 -0.3 1,472,750 + ABZR88_RS06025 0.60 +0.1 1,472,752 + ABZR88_RS06025 0.60 +0.1 1,472,753 - ABZR88_RS06025 0.60 +0.0 1,472,858 - ABZR88_RS06025 0.66 -0.2 1,472,966 - ABZR88_RS06025 0.72 -0.1 1,472,976 - ABZR88_RS06025 0.73 -0.1 1,473,003 + ABZR88_RS06025 0.74 +0.1 1,473,004 - ABZR88_RS06025 0.74 +0.3 1,473,120 + ABZR88_RS06025 0.81 +0.4 1,473,344 - -0.9 1,473,344 - +0.7 1,473,457 + +0.3 1,473,458 - -0.3 1,473,458 - +0.1 1,473,580 + -0.5 1,473,610 + +0.3 1,473,650 - -0.1 1,473,822 - ABZR88_RS06030 0.21 -0.2 1,473,914 - ABZR88_RS06030 0.27 -0.1 1,473,916 + ABZR88_RS06030 0.27 -0.1 1,473,933 - ABZR88_RS06030 0.28 -0.1 1,473,938 - ABZR88_RS06030 0.28 -0.2 1,474,064 + ABZR88_RS06030 0.36 -1.3 1,474,072 + ABZR88_RS06030 0.37 +1.2 1,474,073 - ABZR88_RS06030 0.37 -0.1 1,474,204 + ABZR88_RS06030 0.45 +0.1 1,474,209 - ABZR88_RS06030 0.45 +0.1 1,474,259 - ABZR88_RS06030 0.49 -0.2 1,474,458 - ABZR88_RS06030 0.61 -0.3 1,474,458 - ABZR88_RS06030 0.61 +0.1 1,474,679 - ABZR88_RS06030 0.75 -0.1 1,474,735 + ABZR88_RS06030 0.79 +0.1 1,474,782 + ABZR88_RS06030 0.82 +0.2 1,474,845 - ABZR88_RS06030 0.86 -0.0 1,474,874 + ABZR88_RS06030 0.88 +0.2 1,474,978 + +0.2 1,474,981 + +0.1 1,475,045 - -0.1 1,475,218 - -0.4 1,475,218 - +0.1 1,475,621 + ABZR88_RS06035 0.17 +0.1 1,475,727 + ABZR88_RS06035 0.20 -0.2 1,475,755 - ABZR88_RS06035 0.21 -0.3 1,475,850 + ABZR88_RS06035 0.24 -0.1 1,475,851 - ABZR88_RS06035 0.24 -0.0 1,475,855 - ABZR88_RS06035 0.24 -0.2 1,476,027 + ABZR88_RS06035 0.29 +0.1 1,476,027 + ABZR88_RS06035 0.29 -0.0
Or see this region's nucleotide sequence