Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS02985 and ABZR88_RS02990 are separated by 107 nucleotides ABZR88_RS02990 and ABZR88_RS02995 are separated by 129 nucleotides
ABZR88_RS02985: ABZR88_RS02985 - CAP domain-containing protein, at 711,623 to 712,198
_RS02985
ABZR88_RS02990: ABZR88_RS02990 - hypothetical protein, at 712,306 to 713,379
_RS02990
ABZR88_RS02995: ABZR88_RS02995 - phosphatase PAP2 family protein, at 713,509 to 714,453
_RS02995
Position (kb) 712
713
714 Strain fitness (log2 ratio) -1
0
1 at 711.349 kb on + strand at 711.450 kb on - strand at 711.479 kb on + strand at 711.480 kb on - strand at 711.507 kb on + strand at 711.510 kb on - strand at 711.741 kb on + strand, within ABZR88_RS02985 at 711.894 kb on + strand, within ABZR88_RS02985 at 711.988 kb on - strand, within ABZR88_RS02985 at 712.169 kb on + strand at 712.172 kb on + strand at 712.192 kb on + strand at 712.192 kb on + strand at 712.198 kb on + strand at 712.532 kb on + strand, within ABZR88_RS02990 at 712.620 kb on + strand, within ABZR88_RS02990 at 712.770 kb on + strand, within ABZR88_RS02990 at 712.771 kb on - strand, within ABZR88_RS02990 at 712.871 kb on + strand, within ABZR88_RS02990 at 712.931 kb on + strand, within ABZR88_RS02990 at 712.935 kb on - strand, within ABZR88_RS02990 at 713.026 kb on + strand, within ABZR88_RS02990 at 713.041 kb on - strand, within ABZR88_RS02990 at 713.074 kb on + strand, within ABZR88_RS02990 at 713.182 kb on - strand, within ABZR88_RS02990 at 713.186 kb on + strand, within ABZR88_RS02990 at 713.186 kb on + strand, within ABZR88_RS02990 at 713.341 kb on - strand at 713.389 kb on - strand at 713.450 kb on - strand at 713.618 kb on - strand, within ABZR88_RS02995 at 713.727 kb on - strand, within ABZR88_RS02995 at 713.744 kb on + strand, within ABZR88_RS02995 at 713.795 kb on + strand, within ABZR88_RS02995 at 713.896 kb on + strand, within ABZR88_RS02995 at 713.927 kb on + strand, within ABZR88_RS02995 at 714.181 kb on + strand, within ABZR88_RS02995 at 714.244 kb on - strand, within ABZR88_RS02995 at 714.250 kb on - strand, within ABZR88_RS02995 at 714.290 kb on + strand, within ABZR88_RS02995
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 711,349 + +0.2 711,450 - -0.2 711,479 + +0.0 711,480 - -0.1 711,507 + -0.2 711,510 - -0.0 711,741 + ABZR88_RS02985 0.20 +0.3 711,894 + ABZR88_RS02985 0.47 +0.8 711,988 - ABZR88_RS02985 0.63 -0.1 712,169 + -0.2 712,172 + +0.0 712,192 + -0.1 712,192 + +0.1 712,198 + +0.1 712,532 + ABZR88_RS02990 0.21 -0.4 712,620 + ABZR88_RS02990 0.29 +0.8 712,770 + ABZR88_RS02990 0.43 +0.0 712,771 - ABZR88_RS02990 0.43 -0.9 712,871 + ABZR88_RS02990 0.53 +0.5 712,931 + ABZR88_RS02990 0.58 +0.2 712,935 - ABZR88_RS02990 0.59 +0.4 713,026 + ABZR88_RS02990 0.67 +0.3 713,041 - ABZR88_RS02990 0.68 -0.5 713,074 + ABZR88_RS02990 0.72 -0.4 713,182 - ABZR88_RS02990 0.82 +0.3 713,186 + ABZR88_RS02990 0.82 +1.6 713,186 + ABZR88_RS02990 0.82 +0.6 713,341 - +0.2 713,389 - +0.3 713,450 - +0.2 713,618 - ABZR88_RS02995 0.12 -0.1 713,727 - ABZR88_RS02995 0.23 -0.5 713,744 + ABZR88_RS02995 0.25 -1.1 713,795 + ABZR88_RS02995 0.30 +0.4 713,896 + ABZR88_RS02995 0.41 -0.4 713,927 + ABZR88_RS02995 0.44 -0.3 714,181 + ABZR88_RS02995 0.71 -0.5 714,244 - ABZR88_RS02995 0.78 +0.1 714,250 - ABZR88_RS02995 0.78 +0.9 714,290 + ABZR88_RS02995 0.83 -0.7
Or see this region's nucleotide sequence