Experiment: L-Rhamnose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS08765 and ABZR88_RS08770 are separated by 68 nucleotides ABZR88_RS08770 and ABZR88_RS08775 are separated by 502 nucleotides
ABZR88_RS08765: ABZR88_RS08765 - glycoside hydrolase family 43 protein, at 2,198,862 to 2,199,926
_RS08765
ABZR88_RS08770: ABZR88_RS08770 - sialate O-acetylesterase, at 2,199,995 to 2,201,959
_RS08770
ABZR88_RS08775: ABZR88_RS08775 - glycosyl hydrolase 115 family protein, at 2,202,462 to 2,205,026
_RS08775
Position (kb)
2199
2200
2201
2202 Strain fitness (log2 ratio)
-1
0
1
2 at 2199.025 kb on + strand, within ABZR88_RS08765 at 2199.026 kb on - strand, within ABZR88_RS08765 at 2199.028 kb on - strand, within ABZR88_RS08765 at 2199.116 kb on + strand, within ABZR88_RS08765 at 2199.231 kb on + strand, within ABZR88_RS08765 at 2199.232 kb on - strand, within ABZR88_RS08765 at 2199.232 kb on - strand, within ABZR88_RS08765 at 2199.241 kb on - strand, within ABZR88_RS08765 at 2199.287 kb on + strand, within ABZR88_RS08765 at 2199.390 kb on + strand, within ABZR88_RS08765 at 2199.443 kb on + strand, within ABZR88_RS08765 at 2199.658 kb on - strand, within ABZR88_RS08765 at 2199.660 kb on + strand, within ABZR88_RS08765 at 2199.878 kb on - strand at 2200.038 kb on + strand at 2200.038 kb on + strand at 2200.117 kb on + strand at 2200.286 kb on - strand, within ABZR88_RS08770 at 2200.401 kb on - strand, within ABZR88_RS08770 at 2200.663 kb on - strand, within ABZR88_RS08770 at 2200.787 kb on + strand, within ABZR88_RS08770 at 2200.879 kb on - strand, within ABZR88_RS08770 at 2200.949 kb on - strand, within ABZR88_RS08770 at 2200.970 kb on + strand, within ABZR88_RS08770 at 2200.970 kb on + strand, within ABZR88_RS08770 at 2200.971 kb on - strand, within ABZR88_RS08770 at 2201.091 kb on + strand, within ABZR88_RS08770 at 2201.092 kb on - strand, within ABZR88_RS08770 at 2201.092 kb on - strand, within ABZR88_RS08770 at 2201.095 kb on + strand, within ABZR88_RS08770 at 2201.123 kb on + strand, within ABZR88_RS08770 at 2201.305 kb on + strand, within ABZR88_RS08770 at 2201.312 kb on - strand, within ABZR88_RS08770 at 2201.335 kb on + strand, within ABZR88_RS08770 at 2201.527 kb on + strand, within ABZR88_RS08770 at 2201.545 kb on + strand, within ABZR88_RS08770 at 2201.582 kb on - strand, within ABZR88_RS08770 at 2201.634 kb on - strand, within ABZR88_RS08770 at 2201.971 kb on + strand at 2201.981 kb on + strand at 2201.981 kb on + strand at 2202.184 kb on + strand at 2202.284 kb on + strand at 2202.284 kb on + strand at 2202.285 kb on - strand at 2202.287 kb on - strand at 2202.313 kb on + strand at 2202.328 kb on + strand at 2202.329 kb on - strand at 2202.832 kb on - strand, within ABZR88_RS08775
Per-strain Table
Position Strand Gene LocusTag Fraction L-Rhamnose (C) remove 2,199,025 + ABZR88_RS08765 0.15 -0.5 2,199,026 - ABZR88_RS08765 0.15 -1.2 2,199,028 - ABZR88_RS08765 0.16 -1.6 2,199,116 + ABZR88_RS08765 0.24 -0.6 2,199,231 + ABZR88_RS08765 0.35 +1.3 2,199,232 - ABZR88_RS08765 0.35 -0.0 2,199,232 - ABZR88_RS08765 0.35 -0.2 2,199,241 - ABZR88_RS08765 0.36 -0.9 2,199,287 + ABZR88_RS08765 0.40 -0.0 2,199,390 + ABZR88_RS08765 0.50 +1.9 2,199,443 + ABZR88_RS08765 0.55 -0.2 2,199,658 - ABZR88_RS08765 0.75 -0.4 2,199,660 + ABZR88_RS08765 0.75 +0.2 2,199,878 - -0.9 2,200,038 + -0.4 2,200,038 + -0.0 2,200,117 + -0.4 2,200,286 - ABZR88_RS08770 0.15 -0.5 2,200,401 - ABZR88_RS08770 0.21 +0.2 2,200,663 - ABZR88_RS08770 0.34 +0.1 2,200,787 + ABZR88_RS08770 0.40 -1.1 2,200,879 - ABZR88_RS08770 0.45 -0.4 2,200,949 - ABZR88_RS08770 0.49 +0.4 2,200,970 + ABZR88_RS08770 0.50 -0.2 2,200,970 + ABZR88_RS08770 0.50 -0.7 2,200,971 - ABZR88_RS08770 0.50 -0.6 2,201,091 + ABZR88_RS08770 0.56 -0.2 2,201,092 - ABZR88_RS08770 0.56 -0.4 2,201,092 - ABZR88_RS08770 0.56 +0.3 2,201,095 + ABZR88_RS08770 0.56 +0.2 2,201,123 + ABZR88_RS08770 0.57 -0.5 2,201,305 + ABZR88_RS08770 0.67 -0.5 2,201,312 - ABZR88_RS08770 0.67 -1.6 2,201,335 + ABZR88_RS08770 0.68 +0.2 2,201,527 + ABZR88_RS08770 0.78 -0.5 2,201,545 + ABZR88_RS08770 0.79 +0.2 2,201,582 - ABZR88_RS08770 0.81 -0.2 2,201,634 - ABZR88_RS08770 0.83 +0.0 2,201,971 + +0.1 2,201,981 + -0.5 2,201,981 + +0.0 2,202,184 + -0.1 2,202,284 + +1.3 2,202,284 + -0.3 2,202,285 - -1.5 2,202,287 - -0.9 2,202,313 + -0.4 2,202,328 + +0.1 2,202,329 - +1.3 2,202,832 - ABZR88_RS08775 0.14 +0.4
Or see this region's nucleotide sequence