Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS08770

Experiment: L-Rhamnose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS08765 and ABZR88_RS08770 are separated by 68 nucleotidesABZR88_RS08770 and ABZR88_RS08775 are separated by 502 nucleotides ABZR88_RS08765: ABZR88_RS08765 - glycoside hydrolase family 43 protein, at 2,198,862 to 2,199,926 _RS08765 ABZR88_RS08770: ABZR88_RS08770 - sialate O-acetylesterase, at 2,199,995 to 2,201,959 _RS08770 ABZR88_RS08775: ABZR88_RS08775 - glycosyl hydrolase 115 family protein, at 2,202,462 to 2,205,026 _RS08775 Position (kb) 2199 2200 2201 2202Strain fitness (log2 ratio) -1 0 1 2at 2199.025 kb on + strand, within ABZR88_RS08765at 2199.026 kb on - strand, within ABZR88_RS08765at 2199.028 kb on - strand, within ABZR88_RS08765at 2199.116 kb on + strand, within ABZR88_RS08765at 2199.231 kb on + strand, within ABZR88_RS08765at 2199.232 kb on - strand, within ABZR88_RS08765at 2199.232 kb on - strand, within ABZR88_RS08765at 2199.241 kb on - strand, within ABZR88_RS08765at 2199.287 kb on + strand, within ABZR88_RS08765at 2199.390 kb on + strand, within ABZR88_RS08765at 2199.443 kb on + strand, within ABZR88_RS08765at 2199.658 kb on - strand, within ABZR88_RS08765at 2199.660 kb on + strand, within ABZR88_RS08765at 2199.878 kb on - strandat 2200.038 kb on + strandat 2200.038 kb on + strandat 2200.117 kb on + strandat 2200.286 kb on - strand, within ABZR88_RS08770at 2200.401 kb on - strand, within ABZR88_RS08770at 2200.663 kb on - strand, within ABZR88_RS08770at 2200.787 kb on + strand, within ABZR88_RS08770at 2200.879 kb on - strand, within ABZR88_RS08770at 2200.949 kb on - strand, within ABZR88_RS08770at 2200.970 kb on + strand, within ABZR88_RS08770at 2200.970 kb on + strand, within ABZR88_RS08770at 2200.971 kb on - strand, within ABZR88_RS08770at 2201.091 kb on + strand, within ABZR88_RS08770at 2201.092 kb on - strand, within ABZR88_RS08770at 2201.092 kb on - strand, within ABZR88_RS08770at 2201.095 kb on + strand, within ABZR88_RS08770at 2201.123 kb on + strand, within ABZR88_RS08770at 2201.305 kb on + strand, within ABZR88_RS08770at 2201.312 kb on - strand, within ABZR88_RS08770at 2201.335 kb on + strand, within ABZR88_RS08770at 2201.527 kb on + strand, within ABZR88_RS08770at 2201.545 kb on + strand, within ABZR88_RS08770at 2201.582 kb on - strand, within ABZR88_RS08770at 2201.634 kb on - strand, within ABZR88_RS08770at 2201.971 kb on + strandat 2201.981 kb on + strandat 2201.981 kb on + strandat 2202.184 kb on + strandat 2202.284 kb on + strandat 2202.284 kb on + strandat 2202.285 kb on - strandat 2202.287 kb on - strandat 2202.313 kb on + strandat 2202.328 kb on + strandat 2202.329 kb on - strandat 2202.832 kb on - strand, within ABZR88_RS08775

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Rhamnose (C)
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2,199,025 + ABZR88_RS08765 0.15 -0.5
2,199,026 - ABZR88_RS08765 0.15 -1.2
2,199,028 - ABZR88_RS08765 0.16 -1.6
2,199,116 + ABZR88_RS08765 0.24 -0.6
2,199,231 + ABZR88_RS08765 0.35 +1.3
2,199,232 - ABZR88_RS08765 0.35 -0.0
2,199,232 - ABZR88_RS08765 0.35 -0.2
2,199,241 - ABZR88_RS08765 0.36 -0.9
2,199,287 + ABZR88_RS08765 0.40 -0.0
2,199,390 + ABZR88_RS08765 0.50 +1.9
2,199,443 + ABZR88_RS08765 0.55 -0.2
2,199,658 - ABZR88_RS08765 0.75 -0.4
2,199,660 + ABZR88_RS08765 0.75 +0.2
2,199,878 - -0.9
2,200,038 + -0.4
2,200,038 + -0.0
2,200,117 + -0.4
2,200,286 - ABZR88_RS08770 0.15 -0.5
2,200,401 - ABZR88_RS08770 0.21 +0.2
2,200,663 - ABZR88_RS08770 0.34 +0.1
2,200,787 + ABZR88_RS08770 0.40 -1.1
2,200,879 - ABZR88_RS08770 0.45 -0.4
2,200,949 - ABZR88_RS08770 0.49 +0.4
2,200,970 + ABZR88_RS08770 0.50 -0.2
2,200,970 + ABZR88_RS08770 0.50 -0.7
2,200,971 - ABZR88_RS08770 0.50 -0.6
2,201,091 + ABZR88_RS08770 0.56 -0.2
2,201,092 - ABZR88_RS08770 0.56 -0.4
2,201,092 - ABZR88_RS08770 0.56 +0.3
2,201,095 + ABZR88_RS08770 0.56 +0.2
2,201,123 + ABZR88_RS08770 0.57 -0.5
2,201,305 + ABZR88_RS08770 0.67 -0.5
2,201,312 - ABZR88_RS08770 0.67 -1.6
2,201,335 + ABZR88_RS08770 0.68 +0.2
2,201,527 + ABZR88_RS08770 0.78 -0.5
2,201,545 + ABZR88_RS08770 0.79 +0.2
2,201,582 - ABZR88_RS08770 0.81 -0.2
2,201,634 - ABZR88_RS08770 0.83 +0.0
2,201,971 + +0.1
2,201,981 + -0.5
2,201,981 + +0.0
2,202,184 + -0.1
2,202,284 + +1.3
2,202,284 + -0.3
2,202,285 - -1.5
2,202,287 - -0.9
2,202,313 + -0.4
2,202,328 + +0.1
2,202,329 - +1.3
2,202,832 - ABZR88_RS08775 0.14 +0.4

Or see this region's nucleotide sequence