Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS15365 and ABZR88_RS15370 are separated by 89 nucleotides ABZR88_RS15370 and ABZR88_RS15375 are separated by 263 nucleotides
ABZR88_RS15365: ABZR88_RS15365 - hypothetical protein, at 3,801,835 to 3,804,612
_RS15365
ABZR88_RS15370: ABZR88_RS15370 - transcriptional regulator, at 3,804,702 to 3,805,112
_RS15370
ABZR88_RS15375: ABZR88_RS15375 - TonB-dependent receptor, at 3,805,376 to 3,807,832
_RS15375
Position (kb)
3804
3805
3806 Strain fitness (log2 ratio)
-1
0
1 at 3803.846 kb on - strand, within ABZR88_RS15365 at 3803.895 kb on - strand, within ABZR88_RS15365 at 3803.961 kb on + strand, within ABZR88_RS15365 at 3803.961 kb on + strand, within ABZR88_RS15365 at 3804.066 kb on + strand, within ABZR88_RS15365 at 3804.066 kb on + strand, within ABZR88_RS15365 at 3804.067 kb on - strand, within ABZR88_RS15365 at 3804.127 kb on + strand, within ABZR88_RS15365 at 3804.295 kb on + strand, within ABZR88_RS15365 at 3804.296 kb on - strand, within ABZR88_RS15365 at 3804.409 kb on + strand at 3804.409 kb on + strand at 3804.670 kb on + strand at 3804.915 kb on + strand, within ABZR88_RS15370 at 3804.951 kb on + strand, within ABZR88_RS15370 at 3804.952 kb on - strand, within ABZR88_RS15370 at 3805.110 kb on + strand at 3805.114 kb on + strand at 3805.162 kb on + strand at 3805.320 kb on + strand at 3805.377 kb on + strand at 3805.660 kb on - strand, within ABZR88_RS15375 at 3805.767 kb on + strand, within ABZR88_RS15375 at 3805.768 kb on - strand, within ABZR88_RS15375 at 3805.771 kb on + strand, within ABZR88_RS15375 at 3805.771 kb on + strand, within ABZR88_RS15375 at 3805.894 kb on + strand, within ABZR88_RS15375 at 3805.948 kb on + strand, within ABZR88_RS15375 at 3806.059 kb on - strand, within ABZR88_RS15375 at 3806.059 kb on - strand, within ABZR88_RS15375 at 3806.073 kb on - strand, within ABZR88_RS15375 at 3806.104 kb on - strand, within ABZR88_RS15375
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 3,803,846 - ABZR88_RS15365 0.72 -0.1 3,803,895 - ABZR88_RS15365 0.74 +0.7 3,803,961 + ABZR88_RS15365 0.77 -0.5 3,803,961 + ABZR88_RS15365 0.77 -0.1 3,804,066 + ABZR88_RS15365 0.80 +0.4 3,804,066 + ABZR88_RS15365 0.80 -0.1 3,804,067 - ABZR88_RS15365 0.80 -0.2 3,804,127 + ABZR88_RS15365 0.83 -0.0 3,804,295 + ABZR88_RS15365 0.89 +0.6 3,804,296 - ABZR88_RS15365 0.89 -0.5 3,804,409 + -0.3 3,804,409 + +0.2 3,804,670 + +0.1 3,804,915 + ABZR88_RS15370 0.52 -0.3 3,804,951 + ABZR88_RS15370 0.61 +0.6 3,804,952 - ABZR88_RS15370 0.61 +0.3 3,805,110 + +0.4 3,805,114 + +0.2 3,805,162 + -0.2 3,805,320 + -0.1 3,805,377 + +0.0 3,805,660 - ABZR88_RS15375 0.12 -0.0 3,805,767 + ABZR88_RS15375 0.16 +0.0 3,805,768 - ABZR88_RS15375 0.16 -0.2 3,805,771 + ABZR88_RS15375 0.16 +0.6 3,805,771 + ABZR88_RS15375 0.16 -0.1 3,805,894 + ABZR88_RS15375 0.21 +0.0 3,805,948 + ABZR88_RS15375 0.23 +0.0 3,806,059 - ABZR88_RS15375 0.28 -0.0 3,806,059 - ABZR88_RS15375 0.28 -0.3 3,806,073 - ABZR88_RS15375 0.28 -0.2 3,806,104 - ABZR88_RS15375 0.30 -0.0
Or see this region's nucleotide sequence