Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS05910

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS05905 and ABZR88_RS05910 are separated by 18 nucleotidesABZR88_RS05910 and ABZR88_RS05915 are separated by 185 nucleotidesABZR88_RS05915 and ABZR88_RS05920 are separated by 148 nucleotides ABZR88_RS05905: ABZR88_RS05905 - MFS transporter, at 1,438,734 to 1,440,053 _RS05905 ABZR88_RS05910: ABZR88_RS05910 - (Fe-S)-binding protein, at 1,440,072 to 1,440,800 _RS05910 ABZR88_RS05915: ABZR88_RS05915 - hypothetical protein, at 1,440,986 to 1,441,315 _RS05915 ABZR88_RS05920: ABZR88_RS05920 - hypothetical protein, at 1,441,464 to 1,442,060 _RS05920 Position (kb) 1440 1441Strain fitness (log2 ratio) -1 0 1at 1439.107 kb on + strand, within ABZR88_RS05905at 1439.174 kb on - strand, within ABZR88_RS05905at 1439.404 kb on - strand, within ABZR88_RS05905at 1439.516 kb on - strand, within ABZR88_RS05905at 1439.641 kb on - strand, within ABZR88_RS05905at 1439.663 kb on + strand, within ABZR88_RS05905at 1439.759 kb on - strand, within ABZR88_RS05905at 1439.818 kb on - strand, within ABZR88_RS05905at 1439.890 kb on + strand, within ABZR88_RS05905at 1439.918 kb on - strand, within ABZR88_RS05905at 1439.918 kb on - strand, within ABZR88_RS05905at 1440.051 kb on + strandat 1440.090 kb on - strandat 1440.090 kb on - strandat 1440.174 kb on + strand, within ABZR88_RS05910at 1440.467 kb on - strand, within ABZR88_RS05910at 1440.678 kb on + strand, within ABZR88_RS05910at 1440.681 kb on - strand, within ABZR88_RS05910at 1440.690 kb on - strand, within ABZR88_RS05910at 1440.726 kb on - strand, within ABZR88_RS05910at 1440.772 kb on + strandat 1440.828 kb on - strandat 1440.828 kb on - strandat 1440.828 kb on - strandat 1440.832 kb on - strandat 1441.189 kb on + strand, within ABZR88_RS05915at 1441.206 kb on + strand, within ABZR88_RS05915at 1441.219 kb on + strand, within ABZR88_RS05915at 1441.284 kb on - strandat 1441.305 kb on + strandat 1441.404 kb on + strandat 1441.639 kb on + strand, within ABZR88_RS05920at 1441.683 kb on - strand, within ABZR88_RS05920at 1441.707 kb on + strand, within ABZR88_RS05920at 1441.725 kb on - strand, within ABZR88_RS05920

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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1,439,107 + ABZR88_RS05905 0.28 -0.8
1,439,174 - ABZR88_RS05905 0.33 +0.3
1,439,404 - ABZR88_RS05905 0.51 +0.5
1,439,516 - ABZR88_RS05905 0.59 -0.1
1,439,641 - ABZR88_RS05905 0.69 +0.2
1,439,663 + ABZR88_RS05905 0.70 +0.0
1,439,759 - ABZR88_RS05905 0.78 +0.1
1,439,818 - ABZR88_RS05905 0.82 +0.4
1,439,890 + ABZR88_RS05905 0.88 -0.2
1,439,918 - ABZR88_RS05905 0.90 +0.4
1,439,918 - ABZR88_RS05905 0.90 +0.7
1,440,051 + -0.0
1,440,090 - +0.4
1,440,090 - +0.2
1,440,174 + ABZR88_RS05910 0.14 +0.4
1,440,467 - ABZR88_RS05910 0.54 +0.1
1,440,678 + ABZR88_RS05910 0.83 +0.5
1,440,681 - ABZR88_RS05910 0.84 +0.2
1,440,690 - ABZR88_RS05910 0.85 -0.1
1,440,726 - ABZR88_RS05910 0.90 -0.1
1,440,772 + +0.2
1,440,828 - -0.1
1,440,828 - -0.2
1,440,828 - +1.5
1,440,832 - -0.0
1,441,189 + ABZR88_RS05915 0.62 +0.9
1,441,206 + ABZR88_RS05915 0.67 -0.2
1,441,219 + ABZR88_RS05915 0.71 +0.1
1,441,284 - +0.1
1,441,305 + -0.3
1,441,404 + -0.4
1,441,639 + ABZR88_RS05920 0.29 +0.1
1,441,683 - ABZR88_RS05920 0.37 +0.4
1,441,707 + ABZR88_RS05920 0.41 +0.3
1,441,725 - ABZR88_RS05920 0.44 +0.2

Or see this region's nucleotide sequence