Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS05905 and ABZR88_RS05910 are separated by 18 nucleotides ABZR88_RS05910 and ABZR88_RS05915 are separated by 185 nucleotides ABZR88_RS05915 and ABZR88_RS05920 are separated by 148 nucleotides
ABZR88_RS05905: ABZR88_RS05905 - MFS transporter, at 1,438,734 to 1,440,053
_RS05905
ABZR88_RS05910: ABZR88_RS05910 - (Fe-S)-binding protein, at 1,440,072 to 1,440,800
_RS05910
ABZR88_RS05915: ABZR88_RS05915 - hypothetical protein, at 1,440,986 to 1,441,315
_RS05915
ABZR88_RS05920: ABZR88_RS05920 - hypothetical protein, at 1,441,464 to 1,442,060
_RS05920
Position (kb)
1440
1441 Strain fitness (log2 ratio)
-1
0
1 at 1439.107 kb on + strand, within ABZR88_RS05905 at 1439.174 kb on - strand, within ABZR88_RS05905 at 1439.404 kb on - strand, within ABZR88_RS05905 at 1439.516 kb on - strand, within ABZR88_RS05905 at 1439.641 kb on - strand, within ABZR88_RS05905 at 1439.663 kb on + strand, within ABZR88_RS05905 at 1439.759 kb on - strand, within ABZR88_RS05905 at 1439.818 kb on - strand, within ABZR88_RS05905 at 1439.890 kb on + strand, within ABZR88_RS05905 at 1439.918 kb on - strand, within ABZR88_RS05905 at 1439.918 kb on - strand, within ABZR88_RS05905 at 1440.051 kb on + strand at 1440.090 kb on - strand at 1440.090 kb on - strand at 1440.174 kb on + strand, within ABZR88_RS05910 at 1440.467 kb on - strand, within ABZR88_RS05910 at 1440.678 kb on + strand, within ABZR88_RS05910 at 1440.681 kb on - strand, within ABZR88_RS05910 at 1440.690 kb on - strand, within ABZR88_RS05910 at 1440.726 kb on - strand, within ABZR88_RS05910 at 1440.772 kb on + strand at 1440.828 kb on - strand at 1440.828 kb on - strand at 1440.828 kb on - strand at 1440.832 kb on - strand at 1441.189 kb on + strand, within ABZR88_RS05915 at 1441.206 kb on + strand, within ABZR88_RS05915 at 1441.219 kb on + strand, within ABZR88_RS05915 at 1441.284 kb on - strand at 1441.305 kb on + strand at 1441.404 kb on + strand at 1441.639 kb on + strand, within ABZR88_RS05920 at 1441.683 kb on - strand, within ABZR88_RS05920 at 1441.707 kb on + strand, within ABZR88_RS05920 at 1441.725 kb on - strand, within ABZR88_RS05920
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,439,107 + ABZR88_RS05905 0.28 -0.8 1,439,174 - ABZR88_RS05905 0.33 +0.3 1,439,404 - ABZR88_RS05905 0.51 +0.5 1,439,516 - ABZR88_RS05905 0.59 -0.1 1,439,641 - ABZR88_RS05905 0.69 +0.2 1,439,663 + ABZR88_RS05905 0.70 +0.0 1,439,759 - ABZR88_RS05905 0.78 +0.1 1,439,818 - ABZR88_RS05905 0.82 +0.4 1,439,890 + ABZR88_RS05905 0.88 -0.2 1,439,918 - ABZR88_RS05905 0.90 +0.4 1,439,918 - ABZR88_RS05905 0.90 +0.7 1,440,051 + -0.0 1,440,090 - +0.4 1,440,090 - +0.2 1,440,174 + ABZR88_RS05910 0.14 +0.4 1,440,467 - ABZR88_RS05910 0.54 +0.1 1,440,678 + ABZR88_RS05910 0.83 +0.5 1,440,681 - ABZR88_RS05910 0.84 +0.2 1,440,690 - ABZR88_RS05910 0.85 -0.1 1,440,726 - ABZR88_RS05910 0.90 -0.1 1,440,772 + +0.2 1,440,828 - -0.1 1,440,828 - -0.2 1,440,828 - +1.5 1,440,832 - -0.0 1,441,189 + ABZR88_RS05915 0.62 +0.9 1,441,206 + ABZR88_RS05915 0.67 -0.2 1,441,219 + ABZR88_RS05915 0.71 +0.1 1,441,284 - +0.1 1,441,305 + -0.3 1,441,404 + -0.4 1,441,639 + ABZR88_RS05920 0.29 +0.1 1,441,683 - ABZR88_RS05920 0.37 +0.4 1,441,707 + ABZR88_RS05920 0.41 +0.3 1,441,725 - ABZR88_RS05920 0.44 +0.2
Or see this region's nucleotide sequence