Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05958

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
105,232	+				-0.4
105,232	+				-2.0
105,233	-				+0.7
105,233	-				-0.4
105,244	-				+0.1
105,352	+				-0.5
105,353	-				+0.4
105,355	+				-0.6
105,355	+				-0.6
105,355	+				-0.8
105,355	+				+0.8
105,355	+				-1.6
105,355	+				-2.3
105,355	+				-0.6
105,356	-				-0.4
105,356	-				+0.1
105,356	-				+0.1
105,356	-				-1.0
105,356	-				+0.8
105,356	-				+0.5
105,356	-				-0.1
105,424	+		MPMX19_05957	0.16	-0.0
105,424	+		MPMX19_05957	0.16	-1.5
105,424	+		MPMX19_05957	0.16	-0.1
105,424	+		MPMX19_05957	0.16	+0.5
105,425	-		MPMX19_05957	0.16	+0.6
105,425	-		MPMX19_05957	0.16	+0.8
105,425	-		MPMX19_05957	0.16	-1.1
105,425	-		MPMX19_05957	0.16	+0.4
105,425	-		MPMX19_05957	0.16	-0.4
105,425	-		MPMX19_05957	0.16	-0.1
105,425	-		MPMX19_05957	0.16	-0.2
105,460	+		MPMX19_05957	0.22	-0.2
105,460	+		MPMX19_05957	0.22	+0.3
105,461	-		MPMX19_05957	0.22	-1.6
105,461	-		MPMX19_05957	0.22	+0.1
105,461	-		MPMX19_05957	0.22	-1.0
105,691	+		MPMX19_05957	0.59	-0.6
105,691	+		MPMX19_05957	0.59	-1.2
105,691	+		MPMX19_05957	0.59	-1.6
105,691	+		MPMX19_05957	0.59	+0.5
105,691	+		MPMX19_05957	0.59	+0.1
105,691	+		MPMX19_05957	0.59	-0.0
105,691	+		MPMX19_05957	0.59	-0.4
105,691	+		MPMX19_05957	0.59	-0.8
105,691	+		MPMX19_05957	0.59	-0.6
105,691	+		MPMX19_05957	0.59	+0.2
105,691	+		MPMX19_05957	0.59	+0.5
105,691	+		MPMX19_05957	0.59	+0.5
105,691	+		MPMX19_05957	0.59	-0.9
105,691	+		MPMX19_05957	0.59	-0.6
105,691	+		MPMX19_05957	0.59	-1.4
105,691	+		MPMX19_05957	0.59	-1.7
105,691	+		MPMX19_05957	0.59	-0.5
105,691	+		MPMX19_05957	0.59	+1.3
105,692	-		MPMX19_05957	0.60	+0.7
105,692	-		MPMX19_05957	0.60	+0.5
105,692	-		MPMX19_05957	0.60	-1.0
105,692	-		MPMX19_05957	0.60	+1.3
105,692	-		MPMX19_05957	0.60	+0.7
105,692	-		MPMX19_05957	0.60	-0.3
105,692	-		MPMX19_05957	0.60	-0.8
105,692	-		MPMX19_05957	0.60	-1.0
105,692	-		MPMX19_05957	0.60	-0.1
105,692	-		MPMX19_05957	0.60	-0.0
105,692	-		MPMX19_05957	0.60	-0.1
105,692	-		MPMX19_05957	0.60	-0.0
105,692	-		MPMX19_05957	0.60	-0.4
105,692	-		MPMX19_05957	0.60	+0.4
105,692	-		MPMX19_05957	0.60	+0.2
105,692	-		MPMX19_05957	0.60	+2.3
105,693	-		MPMX19_05957	0.60	-0.3
105,781	+		MPMX19_05957	0.74	+0.7
105,781	+		MPMX19_05957	0.74	-0.6
105,781	+		MPMX19_05957	0.74	+0.3
105,781	+		MPMX19_05957	0.74	+0.7
105,782	-		MPMX19_05957	0.74	-0.1
105,782	-		MPMX19_05957	0.74	+0.7
105,782	-		MPMX19_05957	0.74	-1.2
105,782	-		MPMX19_05957	0.74	+0.3
105,782	-		MPMX19_05957	0.74	-0.1
105,782	-		MPMX19_05957	0.74	+0.3
105,782	-		MPMX19_05957	0.74	-1.9
105,961	+				+1.3
105,962	-				-0.1
105,962	-				-0.0
105,962	-				+0.2
105,962	-				-1.3
105,962	-				+1.1
106,001	+				-0.6
106,001	+				-1.3
106,001	+				-1.5
106,001	+				-0.8
106,002	-				-0.5
106,002	-				-0.5
106,002	-				-0.8
106,002	-				+0.3
106,002	-				-0.5
106,002	-				-0.1
106,002	-				+0.1
106,002	-				-1.3
106,002	-				-0.3
106,003	+				-0.3
106,003	+				-2.3
106,003	+				-0.8
106,003	+				-0.9
106,003	+				-0.8
106,003	+				+0.3
106,003	+				-1.0
106,003	+				-1.1
106,003	+				+0.2
106,003	+				-0.6
106,003	+				+0.1
106,003	+				-0.2
106,004	-				+0.0
106,004	-				-0.6
106,004	-				-0.1
106,004	-				-0.3
106,004	-				+0.2
106,004	-				-1.5
106,004	-				+0.8
106,004	-				-0.1
106,035	+				-0.6
106,035	+				+0.2
106,035	+				+0.6
106,035	+				-2.2
106,035	+				-0.9
106,036	-				+0.2
106,036	-				-0.3
106,044	+				-1.1
106,044	+				+0.2
106,045	-				-0.5
106,045	-				-0.3
106,050	+				-1.0
106,050	+				-1.1
106,050	+				-0.3
106,051	-				-1.9
106,051	-				-0.1
106,051	-				-0.1
106,117	+				-0.2
106,117	+				-0.7
106,117	+				-0.6
106,117	+				-0.4
106,117	+				-0.2
106,117	+				+0.5
106,117	+				-0.1
106,117	+				-2.1
106,117	+				-1.5
106,117	+				-1.1
106,117	+				-0.8
106,118	-				-0.1
106,118	-				+0.4
106,118	-				-0.5
106,118	-				-1.6
106,118	-				-0.6
106,118	-				-1.9
106,118	-				-0.9
106,118	-				-1.6
106,118	-				-0.3
106,122	+				+0.1
106,122	+				+0.6
106,122	+				+0.5
106,122	+				+0.7
106,122	+				-0.3
106,122	+				-1.5
106,122	+				-1.4
106,122	+				+0.6
106,122	+				+0.7
106,122	+				-0.5
106,122	+				+0.1
106,122	+				+0.1
106,122	+				+0.9
106,122	+				-1.9
106,122	+				-1.2
106,123	-				-0.7
106,123	-				+0.1
106,123	-				-1.9
106,123	-				+0.5
106,123	-				-0.3
106,123	-				-0.3
106,123	-				-1.0
106,123	-				+0.2
106,123	-				-0.6
106,123	-				-0.3
106,123	-				-0.6
106,123	-				-0.2
106,316	-		MPMX19_05958	0.13	-0.1
106,321	+		MPMX19_05958	0.13	-2.7
106,321	+		MPMX19_05958	0.13	-0.4
106,321	+		MPMX19_05958	0.13	-0.5
106,321	+		MPMX19_05958	0.13	+0.9
106,322	-		MPMX19_05958	0.13	+0.8
106,322	-		MPMX19_05958	0.13	-0.5
106,322	-		MPMX19_05958	0.13	-1.2
106,322	-		MPMX19_05958	0.13	-1.1
106,405	+		MPMX19_05958	0.19	-1.0
106,406	-		MPMX19_05958	0.19	-0.5
106,912	+		MPMX19_05958	0.51	-0.2
106,912	+		MPMX19_05958	0.51	-0.6
106,912	+		MPMX19_05958	0.51	+0.3
106,912	+		MPMX19_05958	0.51	+0.4
106,912	+		MPMX19_05958	0.51	-0.0
106,912	+		MPMX19_05958	0.51	+0.6
106,912	+		MPMX19_05958	0.51	-0.3
106,912	+		MPMX19_05958	0.51	+0.4
106,912	+		MPMX19_05958	0.51	-1.3
106,912	+		MPMX19_05958	0.51	-0.6
106,912	+		MPMX19_05958	0.51	-1.6
106,912	+		MPMX19_05958	0.51	+0.2
106,912	+		MPMX19_05958	0.51	+0.1
106,912	+		MPMX19_05958	0.51	-0.2
106,913	-		MPMX19_05958	0.51	-0.2
106,913	-		MPMX19_05958	0.51	+0.3
106,913	-		MPMX19_05958	0.51	+0.0
106,913	-		MPMX19_05958	0.51	+0.4
106,913	-		MPMX19_05958	0.51	+0.4
106,913	-		MPMX19_05958	0.51	+0.3
106,913	-		MPMX19_05958	0.51	+1.7
106,913	-		MPMX19_05958	0.51	+0.1
106,913	-		MPMX19_05958	0.51	-1.8
106,913	-		MPMX19_05958	0.51	-2.4
106,987	+		MPMX19_05958	0.55	+0.0
106,987	+		MPMX19_05958	0.55	-0.7
106,987	+		MPMX19_05958	0.55	-1.8
106,988	-		MPMX19_05958	0.55	+0.6
106,988	-		MPMX19_05958	0.55	-0.7
106,988	-		MPMX19_05958	0.55	-2.1
107,008	+		MPMX19_05958	0.57	-1.3
107,008	+		MPMX19_05958	0.57	-3.5
107,008	+		MPMX19_05958	0.57	-2.0
107,134	+		MPMX19_05958	0.65	+0.1
107,134	+		MPMX19_05958	0.65	-0.5
107,134	+		MPMX19_05958	0.65	+1.2
107,135	-		MPMX19_05958	0.65	-0.5
107,135	-		MPMX19_05958	0.65	-0.4
107,368	+		MPMX19_05958	0.79	+0.1
107,368	+		MPMX19_05958	0.79	-1.0
107,368	+		MPMX19_05958	0.79	-1.9
107,368	+		MPMX19_05958	0.79	-0.0
107,368	+		MPMX19_05958	0.79	+0.3
107,368	+		MPMX19_05958	0.79	+0.1
107,368	+		MPMX19_05958	0.79	-0.9
107,368	+		MPMX19_05958	0.79	+0.7
107,368	+		MPMX19_05958	0.79	+1.0
107,368	+		MPMX19_05958	0.79	-1.2
107,368	+		MPMX19_05958	0.79	+0.7
107,368	+		MPMX19_05958	0.79	-0.7
107,368	+		MPMX19_05958	0.79	-1.0
107,368	+		MPMX19_05958	0.79	-0.3
107,369	-		MPMX19_05958	0.79	+0.5
107,369	-		MPMX19_05958	0.79	-1.1
107,381	-		MPMX19_05958	0.80	+0.2
107,608	+				-0.4
107,608	+				+0.5
107,609	-				+0.0
107,609	-				-1.1
107,695	+				-0.7
107,696	-				-0.9
107,696	-				-0.9
107,719	-				-0.1
107,727	+				-0.3
107,727	+				-2.2
107,727	+				-0.5
107,727	+				-1.1
107,728	-				+0.7
107,728	-				+1.4
107,728	-				+0.4
107,728	-				-1.3
107,728	-				-0.1
107,728	-				-0.3
107,728	-				+0.2
107,728	-				-2.7
107,733	+				-0.2
107,882	+				+0.1
107,882	+				+0.2
107,882	+				-1.3
107,882	+				-2.9
107,882	+				-1.2
107,882	+				+0.2
107,882	+				+0.6
107,882	+				-0.8
107,882	+				+1.3
107,882	+				-0.4
107,883	-				-1.0
107,883	-				+0.3
107,883	-				-1.5
107,883	-				-1.2
107,883	-				-1.0
107,883	-				+0.1
107,883	-				-0.8
107,883	-				+0.2
107,883	-				-1.6
107,883	-				-0.3
108,296	+		MPMX19_05959	0.48	-0.8
108,296	+		MPMX19_05959	0.48	-0.8
108,296	+		MPMX19_05959	0.48	-0.9
108,296	+		MPMX19_05959	0.48	-0.4
108,296	+		MPMX19_05959	0.48	-0.2
108,296	+		MPMX19_05959	0.48	-0.8
108,296	+		MPMX19_05959	0.48	-0.2
108,297	-		MPMX19_05959	0.49	+1.7
108,297	-		MPMX19_05959	0.49	-2.4
108,297	-		MPMX19_05959	0.49	-2.6
108,297	-		MPMX19_05959	0.49	-0.1
108,297	-		MPMX19_05959	0.49	-0.6
108,297	-		MPMX19_05959	0.49	+0.4
108,297	-		MPMX19_05959	0.49	-0.0
108,297	-		MPMX19_05959	0.49	-0.1
108,527	+		MPMX19_05959	0.75	-0.9
108,527	+		MPMX19_05959	0.75	-1.4
108,527	+		MPMX19_05959	0.75	-1.7
108,528	-		MPMX19_05959	0.75	+1.7
108,528	-		MPMX19_05959	0.75	-0.2
108,528	-		MPMX19_05959	0.75	+0.4
108,528	-		MPMX19_05959	0.75	+1.7
108,528	-		MPMX19_05959	0.75	-0.8
108,558	+		MPMX19_05959	0.79	-1.5
108,558	+		MPMX19_05959	0.79	+0.0
108,558	+		MPMX19_05959	0.79	-0.7
108,558	+		MPMX19_05959	0.79	-0.3
108,559	-		MPMX19_05959	0.79	+0.5
108,559	-		MPMX19_05959	0.79	-0.6
108,559	-		MPMX19_05959	0.79	-0.4
108,559	-		MPMX19_05959	0.79	+0.5
108,559	-		MPMX19_05959	0.79	-0.1
108,559	-		MPMX19_05959	0.79	-0.6
108,559	-		MPMX19_05959	0.79	-0.6
108,559	-		MPMX19_05959	0.79	-1.1
108,559	-		MPMX19_05959	0.79	+0.7
108,559	-		MPMX19_05959	0.79	-1.5
108,564	+		MPMX19_05959	0.79	+0.4
108,564	+		MPMX19_05959	0.79	-0.1
108,564	+		MPMX19_05959	0.79	+0.7
108,564	+		MPMX19_05959	0.79	-1.8
108,564	+		MPMX19_05959	0.79	+1.3
108,564	+		MPMX19_05959	0.79	-0.6
108,564	+		MPMX19_05959	0.79	-0.6
108,565	-		MPMX19_05959	0.79	+0.0
108,565	-		MPMX19_05959	0.79	-1.1
108,565	-		MPMX19_05959	0.79	-0.4
108,651	-		MPMX19_05959	0.89	-0.3
108,651	-		MPMX19_05959	0.89	-0.7