Experiment: NL-CCM; high oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03471 and MPMX19_03472 overlap by 4 nucleotides MPMX19_03472 and MPMX19_03473 are separated by 217 nucleotides MPMX19_03473 and MPMX19_03474 are separated by 19 nucleotides
MPMX19_03471: MPMX19_03471 - Bifunctional protein Aas, at 880,857 to 884,270
_03471
MPMX19_03472: MPMX19_03472 - Fatty acid metabolism regulator protein, at 884,267 to 884,875
_03472
MPMX19_03473: MPMX19_03473 - hypothetical protein, at 885,093 to 885,506
_03473
MPMX19_03474: MPMX19_03474 - hypothetical protein, at 885,526 to 886,110
_03474
Position (kb) 884
885 Strain fitness (log2 ratio) -2
-1
0
1
2 at 883.438 kb on + strand, within MPMX19_03471 at 883.438 kb on + strand, within MPMX19_03471 at 883.438 kb on + strand, within MPMX19_03471 at 883.438 kb on + strand, within MPMX19_03471 at 883.438 kb on + strand, within MPMX19_03471 at 883.438 kb on + strand, within MPMX19_03471 at 883.439 kb on - strand, within MPMX19_03471 at 883.439 kb on - strand, within MPMX19_03471 at 883.439 kb on - strand, within MPMX19_03471 at 883.439 kb on - strand, within MPMX19_03471 at 883.885 kb on + strand, within MPMX19_03471 at 883.885 kb on + strand, within MPMX19_03471 at 883.885 kb on + strand, within MPMX19_03471 at 883.885 kb on + strand, within MPMX19_03471 at 883.885 kb on + strand, within MPMX19_03471 at 883.885 kb on + strand, within MPMX19_03471 at 884.155 kb on + strand at 884.155 kb on + strand at 884.155 kb on + strand at 884.155 kb on + strand at 884.155 kb on + strand at 884.155 kb on + strand at 884.155 kb on + strand at 884.155 kb on + strand at 884.155 kb on + strand at 884.156 kb on - strand at 884.156 kb on - strand at 884.394 kb on + strand, within MPMX19_03472 at 884.395 kb on - strand, within MPMX19_03472 at 884.395 kb on - strand, within MPMX19_03472 at 884.470 kb on + strand, within MPMX19_03472 at 884.471 kb on - strand, within MPMX19_03472 at 884.697 kb on + strand, within MPMX19_03472 at 884.697 kb on + strand, within MPMX19_03472 at 884.697 kb on + strand, within MPMX19_03472 at 884.698 kb on - strand, within MPMX19_03472 at 884.944 kb on - strand at 884.944 kb on - strand at 884.944 kb on - strand at 884.944 kb on - strand at 884.948 kb on - strand at 884.948 kb on - strand at 884.948 kb on - strand at 884.949 kb on + strand at 884.981 kb on + strand at 884.981 kb on + strand at 884.982 kb on - strand at 884.982 kb on - strand at 884.982 kb on - strand at 884.984 kb on - strand at 884.984 kb on - strand at 884.991 kb on - strand at 885.092 kb on + strand at 885.092 kb on + strand at 885.092 kb on + strand at 885.092 kb on + strand at 885.092 kb on + strand at 885.092 kb on + strand at 885.092 kb on + strand at 885.093 kb on - strand at 885.093 kb on - strand at 885.093 kb on - strand at 885.093 kb on - strand at 885.132 kb on + strand at 885.132 kb on + strand at 885.133 kb on - strand at 885.133 kb on - strand at 885.133 kb on - strand at 885.186 kb on + strand, within MPMX19_03473 at 885.186 kb on + strand, within MPMX19_03473 at 885.186 kb on + strand, within MPMX19_03473 at 885.187 kb on - strand, within MPMX19_03473 at 885.187 kb on - strand, within MPMX19_03473 at 885.187 kb on - strand, within MPMX19_03473 at 885.187 kb on - strand, within MPMX19_03473 at 885.187 kb on - strand, within MPMX19_03473 at 885.372 kb on + strand, within MPMX19_03473 at 885.372 kb on + strand, within MPMX19_03473 at 885.372 kb on + strand, within MPMX19_03473 at 885.372 kb on + strand, within MPMX19_03473 at 885.372 kb on + strand, within MPMX19_03473 at 885.372 kb on + strand, within MPMX19_03473 at 885.372 kb on + strand, within MPMX19_03473 at 885.373 kb on - strand, within MPMX19_03473 at 885.373 kb on - strand, within MPMX19_03473 at 885.373 kb on - strand, within MPMX19_03473 at 885.373 kb on - strand, within MPMX19_03473 at 885.373 kb on - strand, within MPMX19_03473 at 885.373 kb on - strand, within MPMX19_03473 at 885.373 kb on - strand, within MPMX19_03473 at 885.438 kb on + strand, within MPMX19_03473 at 885.439 kb on - strand, within MPMX19_03473 at 885.486 kb on + strand at 885.486 kb on + strand at 885.486 kb on + strand at 885.487 kb on - strand at 885.487 kb on - strand at 885.487 kb on - strand at 885.487 kb on - strand at 885.501 kb on + strand at 885.501 kb on + strand at 885.502 kb on - strand at 885.502 kb on - strand at 885.502 kb on - strand at 885.502 kb on - strand at 885.502 kb on - strand at 885.502 kb on - strand at 885.502 kb on - strand at 885.502 kb on - strand at 885.502 kb on - strand at 885.623 kb on - strand, within MPMX19_03474 at 885.623 kb on - strand, within MPMX19_03474
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; high oxygen remove 883,438 + MPMX19_03471 0.76 -1.5 883,438 + MPMX19_03471 0.76 +0.7 883,438 + MPMX19_03471 0.76 -1.5 883,438 + MPMX19_03471 0.76 -0.4 883,438 + MPMX19_03471 0.76 -1.2 883,438 + MPMX19_03471 0.76 -0.4 883,439 - MPMX19_03471 0.76 +0.1 883,439 - MPMX19_03471 0.76 -2.0 883,439 - MPMX19_03471 0.76 -1.1 883,439 - MPMX19_03471 0.76 +0.8 883,885 + MPMX19_03471 0.89 +0.2 883,885 + MPMX19_03471 0.89 -1.4 883,885 + MPMX19_03471 0.89 +0.5 883,885 + MPMX19_03471 0.89 -2.1 883,885 + MPMX19_03471 0.89 -1.0 883,885 + MPMX19_03471 0.89 +0.6 884,155 + -0.9 884,155 + -0.1 884,155 + +0.1 884,155 + +1.5 884,155 + +0.0 884,155 + -1.3 884,155 + -0.6 884,155 + -1.4 884,155 + -1.4 884,156 - -0.3 884,156 - -0.8 884,394 + MPMX19_03472 0.21 +0.5 884,395 - MPMX19_03472 0.21 -0.8 884,395 - MPMX19_03472 0.21 -0.1 884,470 + MPMX19_03472 0.33 +0.0 884,471 - MPMX19_03472 0.33 -1.3 884,697 + MPMX19_03472 0.71 +1.1 884,697 + MPMX19_03472 0.71 -1.0 884,697 + MPMX19_03472 0.71 -0.8 884,698 - MPMX19_03472 0.71 +0.5 884,944 - -0.3 884,944 - +0.9 884,944 - -1.1 884,944 - -0.1 884,948 - -1.2 884,948 - +0.6 884,948 - +0.8 884,949 + -1.5 884,981 + -2.1 884,981 + +0.4 884,982 - -0.4 884,982 - -0.9 884,982 - +1.8 884,984 - -1.3 884,984 - -1.1 884,991 - +0.6 885,092 + -1.1 885,092 + -0.5 885,092 + -2.1 885,092 + -0.5 885,092 + +1.0 885,092 + -1.0 885,092 + -0.5 885,093 - -1.1 885,093 - -1.0 885,093 - -0.5 885,093 - +0.2 885,132 + +0.2 885,132 + -0.1 885,133 - -1.4 885,133 - -0.4 885,133 - +0.8 885,186 + MPMX19_03473 0.22 -1.1 885,186 + MPMX19_03473 0.22 -1.3 885,186 + MPMX19_03473 0.22 -1.7 885,187 - MPMX19_03473 0.23 +0.7 885,187 - MPMX19_03473 0.23 +1.0 885,187 - MPMX19_03473 0.23 -1.3 885,187 - MPMX19_03473 0.23 +1.1 885,187 - MPMX19_03473 0.23 -1.3 885,372 + MPMX19_03473 0.67 -0.3 885,372 + MPMX19_03473 0.67 -0.7 885,372 + MPMX19_03473 0.67 -0.9 885,372 + MPMX19_03473 0.67 -0.5 885,372 + MPMX19_03473 0.67 -0.6 885,372 + MPMX19_03473 0.67 -1.3 885,372 + MPMX19_03473 0.67 -1.2 885,373 - MPMX19_03473 0.68 -1.1 885,373 - MPMX19_03473 0.68 -1.3 885,373 - MPMX19_03473 0.68 -0.8 885,373 - MPMX19_03473 0.68 -0.4 885,373 - MPMX19_03473 0.68 -0.8 885,373 - MPMX19_03473 0.68 -0.2 885,373 - MPMX19_03473 0.68 -0.1 885,438 + MPMX19_03473 0.83 -1.8 885,439 - MPMX19_03473 0.84 -0.5 885,486 + +1.0 885,486 + +0.0 885,486 + +1.9 885,487 - +0.8 885,487 - -2.3 885,487 - -0.7 885,487 - +0.0 885,501 + -1.1 885,501 + -0.2 885,502 - +0.3 885,502 - -0.6 885,502 - +0.1 885,502 - -1.7 885,502 - -0.7 885,502 - -0.5 885,502 - -2.0 885,502 - +0.5 885,502 - -0.7 885,623 - MPMX19_03474 0.17 +0.2 885,623 - MPMX19_03474 0.17 -1.7
Or see this region's nucleotide sequence