Experiment: NL-CCM; high oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02520 and MPMX19_02521 are separated by 74 nucleotides MPMX19_02521 and MPMX19_02522 are separated by 21 nucleotides MPMX19_02522 and MPMX19_02523 are separated by 252 nucleotides MPMX19_02523 and MPMX19_02524 overlap by 11 nucleotides
MPMX19_02520: MPMX19_02520 - Transcription termination/antitermination protein NusA, at 2,637,976 to 2,639,547
_02520
MPMX19_02521: MPMX19_02521 - hypothetical protein, at 2,639,622 to 2,640,422
_02521
MPMX19_02522: MPMX19_02522 - Translation initiation factor IF-2, at 2,640,444 to 2,643,329
_02522
MPMX19_02523: MPMX19_02523 - Ribosome-binding factor A, at 2,643,582 to 2,644,196
_02523
MPMX19_02524: MPMX19_02524 - tRNA pseudouridine synthase B, at 2,644,186 to 2,645,127
_02524
Position (kb)
2640
2641
2642
2643
2644 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2639.590 kb on + strand at 2639.590 kb on + strand at 2639.590 kb on + strand at 2639.590 kb on + strand at 2640.420 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.428 kb on + strand at 2643.430 kb on + strand at 2643.430 kb on + strand at 2643.430 kb on + strand at 2643.430 kb on + strand at 2643.430 kb on + strand at 2643.578 kb on + strand at 2644.194 kb on + strand at 2644.194 kb on + strand at 2644.194 kb on + strand at 2644.194 kb on + strand at 2644.195 kb on - strand at 2644.195 kb on - strand at 2644.195 kb on - strand at 2644.195 kb on - strand at 2644.195 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; high oxygen remove 2,639,590 + -1.0 2,639,590 + +0.5 2,639,590 + +1.0 2,639,590 + -0.4 2,640,420 + -1.3 2,643,428 + +0.0 2,643,428 + +0.6 2,643,428 + +0.0 2,643,428 + -0.0 2,643,428 + +0.7 2,643,428 + +0.0 2,643,428 + +0.1 2,643,428 + +0.3 2,643,428 + -1.7 2,643,428 + -2.3 2,643,428 + -1.0 2,643,428 + -0.9 2,643,428 + -0.9 2,643,428 + +1.1 2,643,428 + -1.1 2,643,428 + -0.2 2,643,428 + +1.0 2,643,428 + -1.6 2,643,428 + -1.3 2,643,428 + -0.4 2,643,428 + +0.6 2,643,428 + -0.3 2,643,428 + +0.1 2,643,428 + -0.3 2,643,428 + -1.2 2,643,430 + -1.7 2,643,430 + +0.6 2,643,430 + -1.1 2,643,430 + +0.7 2,643,430 + +1.1 2,643,578 + -1.3 2,644,194 + -1.0 2,644,194 + -0.2 2,644,194 + -0.9 2,644,194 + -0.2 2,644,195 - -0.1 2,644,195 - -0.5 2,644,195 - -1.4 2,644,195 - +2.0 2,644,195 - -0.0
Or see this region's nucleotide sequence