Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02198

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
2,300,164	+		MPMX19_02196	0.77	-1.1
2,300,164	+		MPMX19_02196	0.77	-0.1
2,300,164	+		MPMX19_02196	0.77	-0.3
2,300,164	+		MPMX19_02196	0.77	-1.1
2,300,164	+		MPMX19_02196	0.77	+0.3
2,300,164	+		MPMX19_02196	0.77	-0.3
2,300,164	+		MPMX19_02196	0.77	-0.5
2,300,165	-		MPMX19_02196	0.77	-1.7
2,300,165	-		MPMX19_02196	0.77	-0.8
2,300,165	-		MPMX19_02196	0.77	-0.9
2,300,165	-		MPMX19_02196	0.77	-0.5
2,300,165	-		MPMX19_02196	0.77	-0.4
2,300,165	-		MPMX19_02196	0.77	-0.5
2,300,165	-		MPMX19_02196	0.77	-0.0
2,300,165	-		MPMX19_02196	0.77	-1.5
2,300,165	-		MPMX19_02196	0.77	+1.7
2,300,165	-		MPMX19_02196	0.77	-0.9
2,300,165	-		MPMX19_02196	0.77	-0.9
2,300,165	-		MPMX19_02196	0.77	-0.7
2,300,250	-		MPMX19_02196	0.83	-1.5
2,300,285	+		MPMX19_02196	0.86	-0.7
2,300,285	+		MPMX19_02196	0.86	+0.3
2,300,285	+		MPMX19_02196	0.86	-1.1
2,300,285	+		MPMX19_02196	0.86	-1.7
2,300,285	+		MPMX19_02196	0.86	-0.5
2,300,285	+		MPMX19_02196	0.86	+1.2
2,300,285	+		MPMX19_02196	0.86	-1.6
2,300,285	+		MPMX19_02196	0.86	+0.7
2,300,285	+		MPMX19_02196	0.86	-2.6
2,300,285	+		MPMX19_02196	0.86	-1.2
2,300,285	+		MPMX19_02196	0.86	-0.5
2,300,286	-		MPMX19_02196	0.86	+0.1
2,300,286	-		MPMX19_02196	0.86	+0.7
2,300,286	-		MPMX19_02196	0.86	-0.4
2,300,311	+		MPMX19_02196	0.88	-0.1
2,300,311	+		MPMX19_02196	0.88	-0.7
2,300,311	+		MPMX19_02196	0.88	-2.2
2,300,311	+		MPMX19_02196	0.88	+0.1
2,300,311	+		MPMX19_02196	0.88	-0.6
2,300,311	+		MPMX19_02196	0.88	+0.4
2,300,311	+		MPMX19_02196	0.88	-1.7
2,300,311	+		MPMX19_02196	0.88	+0.3
2,300,311	+		MPMX19_02196	0.88	-0.6
2,300,311	+		MPMX19_02196	0.88	+0.5
2,300,312	-		MPMX19_02196	0.88	-0.7
2,300,312	-		MPMX19_02196	0.88	-0.5
2,300,312	-		MPMX19_02196	0.88	-1.1
2,300,312	-		MPMX19_02196	0.88	-0.8
2,300,312	-		MPMX19_02196	0.88	-0.9
2,300,312	-		MPMX19_02196	0.88	+1.0
2,300,312	-		MPMX19_02196	0.88	-1.3
2,300,312	-		MPMX19_02196	0.88	+0.5
2,300,312	-		MPMX19_02196	0.88	-0.5
2,300,312	-		MPMX19_02196	0.88	+1.1
2,300,313	+		MPMX19_02196	0.88	-0.1
2,300,314	-		MPMX19_02196	0.88	-0.3
2,300,314	-		MPMX19_02196	0.88	-0.9
2,300,314	-		MPMX19_02196	0.88	+0.3
2,300,314	-		MPMX19_02196	0.88	-0.2
2,300,314	-		MPMX19_02196	0.88	-0.3
2,300,518	+				-0.3
2,300,518	+				-1.1
2,300,518	+				-1.0
2,300,519	-				-0.2
2,300,519	-				+0.2
2,300,707	+		MPMX19_02197	0.43	-0.4
2,300,707	+		MPMX19_02197	0.43	-0.9
2,300,707	+		MPMX19_02197	0.43	+0.7
2,300,707	+		MPMX19_02197	0.43	-0.3
2,300,708	-		MPMX19_02197	0.44	+0.3
2,300,725	+		MPMX19_02197	0.47	-0.8
2,300,725	+		MPMX19_02197	0.47	-1.7
2,300,725	+		MPMX19_02197	0.47	+0.1
2,300,725	+		MPMX19_02197	0.47	+0.1
2,300,725	+		MPMX19_02197	0.47	-0.9
2,300,725	+		MPMX19_02197	0.47	-1.6
2,300,726	-		MPMX19_02197	0.48	-0.5
2,300,726	-		MPMX19_02197	0.48	-0.7
2,300,726	-		MPMX19_02197	0.48	-1.0
2,300,726	-		MPMX19_02197	0.48	+0.9
2,300,726	-		MPMX19_02197	0.48	-0.6
2,300,726	-		MPMX19_02197	0.48	-0.4
2,300,726	-		MPMX19_02197	0.48	-0.1
2,300,726	-		MPMX19_02197	0.48	+0.1
2,300,726	-		MPMX19_02197	0.48	+0.3
2,300,726	-		MPMX19_02197	0.48	-0.9
2,300,726	-		MPMX19_02197	0.48	-0.2
2,300,726	-		MPMX19_02197	0.48	-0.9
2,300,726	-		MPMX19_02197	0.48	+1.7
2,300,726	-		MPMX19_02197	0.48	-0.2
2,300,726	-		MPMX19_02197	0.48	+0.2
2,300,726	-		MPMX19_02197	0.48	-0.8
2,300,726	-		MPMX19_02197	0.48	-3.0
2,300,726	-		MPMX19_02197	0.48	-0.5
2,300,726	-		MPMX19_02197	0.48	-0.0
2,300,726	-		MPMX19_02197	0.48	-1.2
2,300,821	+		MPMX19_02197	0.69	-2.1
2,300,822	-		MPMX19_02197	0.70	-0.7
2,300,902	+		MPMX19_02197	0.88	+1.5
2,300,902	+		MPMX19_02197	0.88	-1.5
2,300,902	+		MPMX19_02197	0.88	-0.9
2,300,902	+		MPMX19_02197	0.88	-0.3
2,300,902	+		MPMX19_02197	0.88	-0.8
2,300,902	+		MPMX19_02197	0.88	-0.9
2,300,902	+		MPMX19_02197	0.88	-0.9
2,300,902	+		MPMX19_02197	0.88	+0.8
2,300,903	-		MPMX19_02197	0.88	+0.2
2,300,903	-		MPMX19_02197	0.88	-1.1
2,300,903	-		MPMX19_02197	0.88	+0.2
2,300,971	+				+0.3
2,300,971	+				-0.4
2,300,973	+				-0.3
2,300,973	+				+0.1
2,300,973	+				-0.3
2,300,973	+				+0.1
2,300,973	+				-0.5
2,300,973	+				-0.3
2,300,973	+				+0.5
2,300,973	+				-0.0
2,300,973	+				-0.7
2,300,973	+				-0.2
2,300,974	-				+0.5
2,300,974	-				+0.2
2,300,974	-				+0.9
2,300,974	-				-0.8
2,300,974	-				+0.3
2,300,974	-				-1.0
2,300,974	-				+0.3
2,300,974	-				+0.1
2,300,974	-				-0.2
2,300,974	-				-0.0
2,300,974	-				+0.1
2,300,974	-				-0.7
2,300,974	-				-2.2
2,300,974	-				-2.8
2,300,974	-				-0.5
2,301,001	+				-2.1
2,301,001	+				-1.8
2,301,001	+				-0.3
2,301,001	+				-0.1
2,301,001	+				-0.1
2,301,002	-				+0.3
2,301,002	-				-1.7
2,301,058	+				-0.1
2,301,058	+				+0.4
2,301,058	+				+0.1
2,301,058	+				-0.2
2,301,058	+				-1.5
2,301,058	+				-0.3
2,301,058	+				+0.8
2,301,058	+				+1.2
2,301,058	+				-1.2
2,301,058	+				-1.7
2,301,058	+				-0.1
2,301,058	+				+1.5
2,301,058	+				+0.7
2,301,059	-				+0.8
2,301,059	-				+1.2
2,301,059	-				-0.8
2,301,059	-				-0.7
2,301,059	-				-0.3
2,301,059	-				+0.4
2,301,059	-				+1.0
2,301,059	-				-2.2
2,301,059	-				-0.4
2,301,109	+				+0.1
2,301,109	+				-1.9
2,301,109	+				+1.7
2,301,109	+				+0.2
2,301,109	+				-1.1
2,301,109	+				+0.5
2,301,109	+				+0.7
2,301,109	+				-0.3
2,301,258	+		MPMX19_02198	0.45	-0.1
2,301,258	+		MPMX19_02198	0.45	-2.2
2,301,258	+		MPMX19_02198	0.45	-1.6
2,301,258	+		MPMX19_02198	0.45	+0.2
2,301,258	+		MPMX19_02198	0.45	-0.3
2,301,258	+		MPMX19_02198	0.45	-1.5
2,301,258	+		MPMX19_02198	0.45	-2.3
2,301,258	+		MPMX19_02198	0.45	-0.2
2,301,258	+		MPMX19_02198	0.45	+0.3
2,301,259	-		MPMX19_02198	0.46	-1.0
2,301,259	-		MPMX19_02198	0.46	+0.1
2,301,259	-		MPMX19_02198	0.46	-0.3
2,301,259	-		MPMX19_02198	0.46	-1.0
2,301,259	-		MPMX19_02198	0.46	-1.2
2,301,259	-		MPMX19_02198	0.46	-2.0
2,301,259	-		MPMX19_02198	0.46	+0.7
2,301,397	+				-0.5
2,301,397	+				+0.3
2,301,398	-				-0.1
2,301,398	-				+0.7
2,301,398	-				-1.3
2,301,398	-				+0.5
2,301,398	-				-0.4
2,301,398	-				+0.1
2,301,463	+				+0.4
2,301,463	+				-0.7
2,301,463	+				-2.8
2,301,463	+				-0.9
2,301,464	-				-0.2
2,301,464	-				-1.9
2,301,556	+		MPMX19_02199	0.19	+0.4
2,301,556	+		MPMX19_02199	0.19	-0.7
2,301,556	+		MPMX19_02199	0.19	-1.3
2,301,556	+		MPMX19_02199	0.19	-1.3
2,301,556	+		MPMX19_02199	0.19	-0.3
2,301,556	+		MPMX19_02199	0.19	-0.4
2,301,557	-		MPMX19_02199	0.19	+0.7
2,301,557	-		MPMX19_02199	0.19	-2.0
2,301,557	-		MPMX19_02199	0.19	-0.9
2,301,557	-		MPMX19_02199	0.19	-0.2
2,301,557	-		MPMX19_02199	0.19	-1.1
2,301,557	-		MPMX19_02199	0.19	-1.2
2,301,557	-		MPMX19_02199	0.19	-1.3
2,301,557	-		MPMX19_02199	0.19	-0.6
2,301,604	+		MPMX19_02199	0.25	+0.3
2,301,604	+		MPMX19_02199	0.25	-0.7
2,301,604	+		MPMX19_02199	0.25	+0.2
2,301,604	+		MPMX19_02199	0.25	+0.2
2,301,604	+		MPMX19_02199	0.25	+1.7
2,301,604	+		MPMX19_02199	0.25	+0.6
2,301,604	+		MPMX19_02199	0.25	-0.3
2,301,604	+		MPMX19_02199	0.25	-2.0
2,301,604	+		MPMX19_02199	0.25	+1.2
2,301,605	-		MPMX19_02199	0.25	-0.0
2,301,605	-		MPMX19_02199	0.25	+0.7
2,301,605	-		MPMX19_02199	0.25	-0.1
2,301,605	-		MPMX19_02199	0.25	-0.8
2,301,605	-		MPMX19_02199	0.25	+0.2
2,301,605	-		MPMX19_02199	0.25	+0.1
2,301,605	-		MPMX19_02199	0.25	-0.4
2,301,605	-		MPMX19_02199	0.25	+2.0
2,301,605	-		MPMX19_02199	0.25	-0.4
2,301,605	-		MPMX19_02199	0.25	-2.2
2,301,605	-		MPMX19_02199	0.25	-0.7
2,301,605	-		MPMX19_02199	0.25	-0.7
2,301,605	-		MPMX19_02199	0.25	-1.0
2,301,605	-		MPMX19_02199	0.25	-0.8
2,301,664	+		MPMX19_02199	0.32	+0.4
2,301,664	+		MPMX19_02199	0.32	-0.9
2,301,664	+		MPMX19_02199	0.32	-0.7
2,301,665	-		MPMX19_02199	0.32	-1.3
2,301,665	-		MPMX19_02199	0.32	+0.1
2,301,665	-		MPMX19_02199	0.32	-1.3
2,301,665	-		MPMX19_02199	0.32	-0.3
2,301,778	+		MPMX19_02199	0.46	-1.3
2,301,779	-		MPMX19_02199	0.46	-0.4
2,301,916	+		MPMX19_02199	0.63	-0.7
2,301,916	+		MPMX19_02199	0.63	-1.1
2,301,916	+		MPMX19_02199	0.63	+0.2
2,301,917	-		MPMX19_02199	0.63	-1.5
2,301,917	-		MPMX19_02199	0.63	+0.5
2,302,162	+				+0.7
2,302,162	+				-0.9
2,302,162	+				+1.2
2,302,162	+				-0.5
2,302,162	+				-0.5
2,302,162	+				-2.0
2,302,162	+				-1.5
2,302,162	+				-0.8
2,302,162	+				-0.5
2,302,163	-				+0.2
2,302,163	-				-1.1
2,302,183	+				-0.3
2,302,183	+				+0.4
2,302,183	+				-1.8
2,302,183	+				-0.9
2,302,184	-				-1.3
2,302,184	-				+1.2
2,302,184	-				-0.1
2,302,259	+				+1.1
2,302,336	+				+0.4
2,302,336	+				-0.4
2,302,336	+				+0.2
2,302,336	+				-0.3
2,302,336	+				-1.3
2,302,337	-		MPMX19_02200	0.10	+0.1
2,302,381	+		MPMX19_02200	0.15	-0.1
2,302,381	+		MPMX19_02200	0.15	-2.8
2,302,381	+		MPMX19_02200	0.15	-0.5
2,302,381	+		MPMX19_02200	0.15	-1.7
2,302,381	+		MPMX19_02200	0.15	-0.7
2,302,381	+		MPMX19_02200	0.15	-1.0
2,302,381	+		MPMX19_02200	0.15	-0.7
2,302,381	+		MPMX19_02200	0.15	+0.8
2,302,381	+		MPMX19_02200	0.15	-1.2
2,302,381	+		MPMX19_02200	0.15	-0.3
2,302,381	+		MPMX19_02200	0.15	+0.5
2,302,381	+		MPMX19_02200	0.15	-0.2
2,302,381	+		MPMX19_02200	0.15	-2.8
2,302,381	+		MPMX19_02200	0.15	+0.2
2,302,381	+		MPMX19_02200	0.15	-0.7
2,302,381	+		MPMX19_02200	0.15	+0.2
2,302,381	+		MPMX19_02200	0.15	+1.1
2,302,381	+		MPMX19_02200	0.15	-0.1
2,302,382	-		MPMX19_02200	0.15	+1.2
2,302,382	-		MPMX19_02200	0.15	+1.2
2,302,382	-		MPMX19_02200	0.15	-0.4
2,302,382	-		MPMX19_02200	0.15	-0.8
2,302,382	-		MPMX19_02200	0.15	-0.5
2,302,382	-		MPMX19_02200	0.15	-2.2
2,302,382	-		MPMX19_02200	0.15	-0.2
2,302,382	-		MPMX19_02200	0.15	-0.4
2,302,382	-		MPMX19_02200	0.15	+1.9
2,302,382	-		MPMX19_02200	0.15	+0.3
2,302,382	-		MPMX19_02200	0.15	-0.1
2,302,382	-		MPMX19_02200	0.15	-1.5
2,302,382	-		MPMX19_02200	0.15	-0.1
2,302,382	-		MPMX19_02200	0.15	-0.3
2,302,382	-		MPMX19_02200	0.15	+0.4