Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01965

Experiment: NL-CCM; high oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; high oxygen
2,045,050	+		MPMX19_01963	0.42	-1.0
2,045,050	+		MPMX19_01963	0.42	-0.2
2,045,050	+		MPMX19_01963	0.42	-0.6
2,045,050	+		MPMX19_01963	0.42	-0.5
2,045,050	+		MPMX19_01963	0.42	-0.4
2,045,050	+		MPMX19_01963	0.42	-0.6
2,045,050	+		MPMX19_01963	0.42	+0.2
2,045,050	+		MPMX19_01963	0.42	-0.6
2,045,050	+		MPMX19_01963	0.42	+0.3
2,045,050	+		MPMX19_01963	0.42	-0.3
2,045,050	+		MPMX19_01963	0.42	+0.8
2,045,050	+		MPMX19_01963	0.42	-0.5
2,045,050	+		MPMX19_01963	0.42	+1.3
2,045,050	+		MPMX19_01963	0.42	-0.6
2,045,050	+		MPMX19_01963	0.42	+0.2
2,045,050	+		MPMX19_01963	0.42	+0.6
2,045,050	+		MPMX19_01963	0.42	-0.7
2,045,050	+		MPMX19_01963	0.42	+0.0
2,045,050	+		MPMX19_01963	0.42	+1.5
2,045,050	+		MPMX19_01963	0.42	+0.4
2,045,050	+		MPMX19_01963	0.42	+1.4
2,045,050	+		MPMX19_01963	0.42	-1.8
2,045,050	+		MPMX19_01963	0.42	+0.2
2,045,050	+		MPMX19_01963	0.42	+1.3
2,045,050	+		MPMX19_01963	0.42	-0.7
2,045,050	+		MPMX19_01963	0.42	+0.7
2,045,050	+		MPMX19_01963	0.42	-2.6
2,045,050	+		MPMX19_01963	0.42	+0.2
2,045,050	+		MPMX19_01963	0.42	+0.6
2,045,050	+		MPMX19_01963	0.42	+0.5
2,045,050	+		MPMX19_01963	0.42	-0.2
2,045,050	+		MPMX19_01963	0.42	+0.7
2,045,050	+		MPMX19_01963	0.42	-0.4
2,045,050	+		MPMX19_01963	0.42	-1.2
2,045,050	+		MPMX19_01963	0.42	-0.5
2,045,050	+		MPMX19_01963	0.42	-0.5
2,045,051	-		MPMX19_01963	0.42	+1.7
2,045,051	-		MPMX19_01963	0.42	-1.3
2,045,051	-		MPMX19_01963	0.42	-0.0
2,045,051	-		MPMX19_01963	0.42	-0.8
2,045,051	-		MPMX19_01963	0.42	+0.2
2,045,051	-		MPMX19_01963	0.42	+0.7
2,045,051	-		MPMX19_01963	0.42	+2.1
2,045,051	-		MPMX19_01963	0.42	-0.6
2,045,051	-		MPMX19_01963	0.42	-0.5
2,045,051	-		MPMX19_01963	0.42	-1.8
2,045,051	-		MPMX19_01963	0.42	+0.9
2,045,051	-		MPMX19_01963	0.42	+1.4
2,045,051	-		MPMX19_01963	0.42	+0.8
2,045,051	-		MPMX19_01963	0.42	+0.1
2,045,051	-		MPMX19_01963	0.42	-0.3
2,045,051	-		MPMX19_01963	0.42	+1.3
2,045,051	-		MPMX19_01963	0.42	+0.0
2,045,051	-		MPMX19_01963	0.42	-2.5
2,045,051	-		MPMX19_01963	0.42	-1.2
2,045,051	-		MPMX19_01963	0.42	-0.4
2,045,051	-		MPMX19_01963	0.42	-0.3
2,045,051	-		MPMX19_01963	0.42	-1.0
2,045,051	-		MPMX19_01963	0.42	+0.7
2,045,051	-		MPMX19_01963	0.42	-0.2
2,045,051	-		MPMX19_01963	0.42	+0.3
2,045,051	-		MPMX19_01963	0.42	-0.9
2,045,051	-		MPMX19_01963	0.42	-0.2
2,045,051	-		MPMX19_01963	0.42	-0.3
2,045,051	-		MPMX19_01963	0.42	-0.2
2,045,051	-		MPMX19_01963	0.42	-0.5
2,045,051	-		MPMX19_01963	0.42	-1.1
2,045,056	+		MPMX19_01963	0.43	+0.1
2,045,056	+		MPMX19_01963	0.43	-0.8
2,045,056	+		MPMX19_01963	0.43	+0.7
2,045,056	+		MPMX19_01963	0.43	+0.5
2,045,056	+		MPMX19_01963	0.43	+0.5
2,045,056	+		MPMX19_01963	0.43	+0.2
2,045,057	-		MPMX19_01963	0.43	-0.3
2,045,057	-		MPMX19_01963	0.43	-2.0
2,045,057	-		MPMX19_01963	0.43	-2.8
2,045,057	-		MPMX19_01963	0.43	-0.7
2,045,057	-		MPMX19_01963	0.43	+0.7
2,045,206	+		MPMX19_01963	0.57	-1.0
2,045,206	+		MPMX19_01963	0.57	-0.0
2,045,206	+		MPMX19_01963	0.57	-0.3
2,045,206	+		MPMX19_01963	0.57	+0.2
2,045,206	+		MPMX19_01963	0.57	-0.3
2,045,206	+		MPMX19_01963	0.57	-0.3
2,045,207	-		MPMX19_01963	0.57	-0.7
2,045,207	-		MPMX19_01963	0.57	+0.9
2,045,207	-		MPMX19_01963	0.57	+0.3
2,045,207	-		MPMX19_01963	0.57	-1.0
2,045,207	-		MPMX19_01963	0.57	-0.6
2,045,233	+		MPMX19_01963	0.59	+0.5
2,045,233	+		MPMX19_01963	0.59	+0.4
2,045,233	+		MPMX19_01963	0.59	-1.0
2,045,233	+		MPMX19_01963	0.59	+0.7
2,045,234	-		MPMX19_01963	0.59	-0.5
2,045,234	-		MPMX19_01963	0.59	-2.0
2,045,234	-		MPMX19_01963	0.59	+0.5
2,045,234	-		MPMX19_01963	0.59	+1.0
2,045,234	-		MPMX19_01963	0.59	-0.0
2,045,668	+				-0.3
2,045,668	+				-0.3
2,045,668	+				-1.3
2,045,668	+				-0.1
2,045,668	+				+0.0
2,045,668	+				-0.7
2,045,668	+				+0.7
2,045,668	+				-0.4
2,045,668	+				-0.5
2,045,668	+				-0.3
2,045,668	+				-0.4
2,045,668	+				-0.0
2,045,668	+				-0.0
2,045,668	+				+0.5
2,045,668	+				+0.1
2,045,668	+				+0.3
2,045,668	+				+0.2
2,045,669	-				+0.3
2,045,669	-				+0.3
2,045,669	-				+0.5
2,045,669	-				+0.6
2,045,669	-				-0.2
2,045,669	-				-0.9
2,045,669	-				-1.1
2,045,669	-				+1.0
2,045,669	-				-0.6
2,045,669	-				+0.5
2,045,669	-				-0.3
2,045,669	-				-0.1
2,045,669	-				+0.1
2,045,669	-				-1.9
2,045,850	+		MPMX19_01964	0.80	-0.5
2,045,865	+		MPMX19_01964	0.87	-0.3
2,045,865	+		MPMX19_01964	0.87	-0.9
2,045,865	+		MPMX19_01964	0.87	-0.2
2,045,866	-		MPMX19_01964	0.88	+0.1
2,045,866	-		MPMX19_01964	0.88	-0.6
2,045,866	-		MPMX19_01964	0.88	+0.2
2,046,900	+		MPMX19_01965	0.43	-1.0
2,046,901	-		MPMX19_01965	0.43	-1.1
2,046,901	-		MPMX19_01965	0.43	-2.2
2,047,511	+		MPMX19_01965	0.72	-0.0
2,047,511	+		MPMX19_01965	0.72	+1.1
2,047,511	+		MPMX19_01965	0.72	+1.1
2,047,511	+		MPMX19_01965	0.72	-0.4
2,047,511	+		MPMX19_01965	0.72	+0.1
2,047,511	+		MPMX19_01965	0.72	-0.0
2,047,511	+		MPMX19_01965	0.72	-1.1
2,047,511	+		MPMX19_01965	0.72	-0.3
2,047,511	+		MPMX19_01965	0.72	+1.5
2,047,511	+		MPMX19_01965	0.72	-1.0
2,047,511	+		MPMX19_01965	0.72	-1.3
2,047,511	+		MPMX19_01965	0.72	-0.9
2,047,511	+		MPMX19_01965	0.72	-0.8
2,047,511	+		MPMX19_01965	0.72	-0.8
2,047,511	+		MPMX19_01965	0.72	-1.2
2,047,512	-		MPMX19_01965	0.72	+0.4
2,047,512	-		MPMX19_01965	0.72	-0.4
2,047,512	-		MPMX19_01965	0.72	-1.9
2,047,512	-		MPMX19_01965	0.72	+0.3
2,047,512	-		MPMX19_01965	0.72	-0.1
2,047,512	-		MPMX19_01965	0.72	-0.2
2,047,512	-		MPMX19_01965	0.72	+0.4
2,047,512	-		MPMX19_01965	0.72	-1.8
2,047,512	-		MPMX19_01965	0.72	+0.7
2,047,512	-		MPMX19_01965	0.72	+1.0
2,047,512	-		MPMX19_01965	0.72	-2.2
2,047,512	-		MPMX19_01965	0.72	-0.0
2,047,512	-		MPMX19_01965	0.72	-0.3
2,047,512	-		MPMX19_01965	0.72	-0.8
2,047,532	+		MPMX19_01965	0.73	+0.5
2,047,532	+		MPMX19_01965	0.73	-1.8
2,047,532	+		MPMX19_01965	0.73	-0.8
2,047,533	-		MPMX19_01965	0.73	-0.9
2,047,533	-		MPMX19_01965	0.73	+1.4
2,047,533	-		MPMX19_01965	0.73	+0.4
2,047,533	-		MPMX19_01965	0.73	+0.5
2,047,583	+		MPMX19_01965	0.76	+0.2
2,047,583	+		MPMX19_01965	0.76	-0.0
2,047,583	+		MPMX19_01965	0.76	-0.2
2,047,583	+		MPMX19_01965	0.76	+0.2
2,047,584	-		MPMX19_01965	0.76	+0.0
2,047,584	-		MPMX19_01965	0.76	+0.1
2,047,584	-		MPMX19_01965	0.76	-1.9
2,047,584	-		MPMX19_01965	0.76	+0.5
2,047,584	-		MPMX19_01965	0.76	-0.2
2,047,584	-		MPMX19_01965	0.76	-0.9
2,047,584	-		MPMX19_01965	0.76	+0.3
2,047,584	-		MPMX19_01965	0.76	-0.3
2,047,584	-		MPMX19_01965	0.76	+0.2
2,047,584	-		MPMX19_01965	0.76	+0.3
2,047,584	-		MPMX19_01965	0.76	+0.2
2,047,584	-		MPMX19_01965	0.76	+0.3
2,047,584	-		MPMX19_01965	0.76	+0.3
2,047,584	-		MPMX19_01965	0.76	+0.3
2,047,604	+		MPMX19_01965	0.77	+0.1
2,047,604	+		MPMX19_01965	0.77	-0.3
2,047,604	+		MPMX19_01965	0.77	+1.1
2,047,604	+		MPMX19_01965	0.77	-0.0
2,047,605	-		MPMX19_01965	0.77	+0.3
2,047,605	-		MPMX19_01965	0.77	-0.3
2,047,605	-		MPMX19_01965	0.77	-0.6
2,047,605	-		MPMX19_01965	0.77	-1.5
2,047,751	+		MPMX19_01965	0.84	+0.4
2,047,751	+		MPMX19_01965	0.84	-0.0
2,047,751	+		MPMX19_01965	0.84	+0.1
2,047,751	+		MPMX19_01965	0.84	-2.3
2,047,751	+		MPMX19_01965	0.84	+0.3
2,047,751	+		MPMX19_01965	0.84	+0.1
2,047,752	-		MPMX19_01965	0.84	-0.1
2,047,752	-		MPMX19_01965	0.84	+0.5
2,047,752	-		MPMX19_01965	0.84	-1.0
2,047,752	-		MPMX19_01965	0.84	+0.5
2,047,752	-		MPMX19_01965	0.84	+0.5
2,047,752	-		MPMX19_01965	0.84	-0.5
2,047,752	-		MPMX19_01965	0.84	+1.1
2,047,752	-		MPMX19_01965	0.84	-0.5
2,047,752	-		MPMX19_01965	0.84	-0.8
2,047,752	-		MPMX19_01965	0.84	-0.3
2,047,752	-		MPMX19_01965	0.84	-0.5
2,047,769	+		MPMX19_01965	0.85	-0.0
2,047,769	+		MPMX19_01965	0.85	-1.0
2,047,769	+		MPMX19_01965	0.85	+0.5
2,047,770	-		MPMX19_01965	0.85	-0.6
2,047,770	-		MPMX19_01965	0.85	+0.1
2,047,770	-		MPMX19_01965	0.85	-2.4
2,047,850	+		MPMX19_01965	0.89	-0.1
2,047,850	+		MPMX19_01965	0.89	-2.0
2,047,850	+		MPMX19_01965	0.89	+0.8
2,047,850	+		MPMX19_01965	0.89	-1.0
2,047,850	+		MPMX19_01965	0.89	+0.5
2,047,850	+		MPMX19_01965	0.89	+0.1
2,047,850	+		MPMX19_01965	0.89	-1.0
2,047,850	+		MPMX19_01965	0.89	-1.9
2,047,850	+		MPMX19_01965	0.89	-0.3
2,047,851	-		MPMX19_01965	0.89	-0.3
2,047,851	-		MPMX19_01965	0.89	-0.3
2,047,851	-		MPMX19_01965	0.89	+1.3
2,047,851	-		MPMX19_01965	0.89	-0.1
2,047,865	+		MPMX19_01965	0.90	-0.2
2,047,865	+		MPMX19_01965	0.90	-1.4
2,047,865	+		MPMX19_01965	0.90	-0.7
2,047,865	+		MPMX19_01965	0.90	-0.5
2,047,865	+		MPMX19_01965	0.90	-0.8
2,047,865	+		MPMX19_01965	0.90	+0.3
2,047,865	+		MPMX19_01965	0.90	+0.3
2,047,865	+		MPMX19_01965	0.90	-1.3
2,047,865	+		MPMX19_01965	0.90	-0.0
2,047,865	+		MPMX19_01965	0.90	-0.7
2,047,865	+		MPMX19_01965	0.90	-0.8
2,047,865	+		MPMX19_01965	0.90	-1.5
2,047,865	+		MPMX19_01965	0.90	-0.9
2,047,865	+		MPMX19_01965	0.90	-0.5
2,047,865	+		MPMX19_01965	0.90	-0.7
2,047,866	-		MPMX19_01965	0.90	-1.0
2,047,866	-		MPMX19_01965	0.90	-0.3
2,047,866	-		MPMX19_01965	0.90	-1.4
2,047,866	-		MPMX19_01965	0.90	+0.4
2,047,866	-		MPMX19_01965	0.90	+0.5
2,047,866	-		MPMX19_01965	0.90	-0.4
2,047,866	-		MPMX19_01965	0.90	-0.2
2,047,866	-		MPMX19_01965	0.90	+0.1
2,047,866	-		MPMX19_01965	0.90	-1.6
2,047,866	-		MPMX19_01965	0.90	-1.0
2,047,866	-		MPMX19_01965	0.90	-0.4
2,047,866	-		MPMX19_01965	0.90	+0.9
2,047,866	-		MPMX19_01965	0.90	-0.9
2,047,866	-		MPMX19_01965	0.90	+0.2
2,047,922	+				+0.9
2,047,922	+				-0.3
2,047,922	+				-0.5
2,047,922	+				-0.1
2,047,922	+				-0.4
2,047,922	+				-1.3
2,047,923	-				-0.0
2,047,923	-				+0.3
2,047,923	-				-0.5
2,047,923	-				-0.2
2,047,923	-				-2.5
2,047,923	-				+1.2
2,047,923	-				+0.3
2,048,019	+				-0.2
2,048,019	+				-1.5
2,048,019	+				-1.0
2,048,019	+				-1.2
2,048,019	+				-0.4
2,048,019	+				-1.5
2,048,020	-				+0.0
2,048,020	-				-0.3
2,048,020	-				-2.2
2,048,020	-				-0.3
2,048,020	-				-0.2
2,048,020	-				-1.8
2,048,020	-				-0.4
2,048,020	-				-0.6
2,048,097	+				-1.1
2,048,098	-				-0.8
2,048,098	-				-1.5
2,048,103	+				-0.4
2,048,104	-				-2.5
2,048,467	+				-0.3
2,048,467	+				+0.2
2,048,468	-				-1.3
2,048,468	-				+1.8
2,048,489	+				-0.5
2,048,489	+				-1.0
2,048,489	+				-0.9
2,048,489	+				-2.3
2,048,489	+				-1.6
2,048,490	-				-1.3
2,048,490	-				+1.1
2,048,490	-				-0.4
2,048,490	-				-0.4
2,048,490	-				+0.1
2,048,490	-				-0.1
2,048,712	+		MPMX19_01967	0.13	-0.5
2,048,712	+		MPMX19_01967	0.13	+0.2
2,048,712	+		MPMX19_01967	0.13	-0.4
2,048,712	+		MPMX19_01967	0.13	-0.3
2,048,712	+		MPMX19_01967	0.13	-1.1
2,048,713	-		MPMX19_01967	0.13	+0.8
2,048,713	-		MPMX19_01967	0.13	-1.6
2,048,713	-		MPMX19_01967	0.13	-0.0
2,048,713	-		MPMX19_01967	0.13	-1.0
2,048,713	-		MPMX19_01967	0.13	+0.3
2,048,713	-		MPMX19_01967	0.13	-1.9
2,048,713	-		MPMX19_01967	0.13	-0.7
2,048,713	-		MPMX19_01967	0.13	-0.9
2,048,713	-		MPMX19_01967	0.13	-0.7
2,048,713	-		MPMX19_01967	0.13	+0.5
2,048,755	+		MPMX19_01967	0.16	+0.6
2,048,755	+		MPMX19_01967	0.16	-0.6
2,048,755	+		MPMX19_01967	0.16	-0.6
2,048,756	-		MPMX19_01967	0.16	+0.3
2,048,756	-		MPMX19_01967	0.16	-0.7
2,048,756	-		MPMX19_01967	0.16	+0.1
2,048,756	-		MPMX19_01967	0.16	-0.7
2,048,784	+		MPMX19_01967	0.18	+0.4
2,048,784	+		MPMX19_01967	0.18	-0.2
2,048,784	+		MPMX19_01967	0.18	+0.1
2,048,785	-		MPMX19_01967	0.18	-1.3
2,048,785	-		MPMX19_01967	0.18	+0.4
2,048,785	-		MPMX19_01967	0.18	-0.3
2,048,785	-		MPMX19_01967	0.18	-1.2
2,048,785	-		MPMX19_01967	0.18	+0.8
2,048,850	+		MPMX19_01967	0.22	-0.3
2,048,850	+		MPMX19_01967	0.22	-0.7
2,048,850	+		MPMX19_01967	0.22	-0.8
2,048,851	-		MPMX19_01967	0.22	+0.2
2,048,851	-		MPMX19_01967	0.22	+0.3
2,048,851	-		MPMX19_01967	0.22	+0.0
2,049,021	+		MPMX19_01967	0.34	-0.0
2,049,021	+		MPMX19_01967	0.34	-0.8
2,049,021	+		MPMX19_01967	0.34	+0.1
2,049,021	+		MPMX19_01967	0.34	+0.4
2,049,022	-		MPMX19_01967	0.34	+1.1
2,049,022	-		MPMX19_01967	0.34	-1.0