Experiment: NL-CCM; high oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00931 and MPMX19_00932 are separated by 254 nucleotides MPMX19_00932 and MPMX19_00933 overlap by 1 nucleotides
MPMX19_00931: MPMX19_00931 - Cyclopropane-fatty-acyl-phospholipid synthase, at 968,596 to 969,864
_00931
MPMX19_00932: MPMX19_00932 - 50S ribosomal protein L9, at 970,119 to 970,682
_00932
MPMX19_00933: MPMX19_00933 - hypothetical protein, at 970,682 to 971,641
_00933
Position (kb) 970
971 Strain fitness (log2 ratio) -2
-1
0
1 at 969.185 kb on + strand, within MPMX19_00931 at 969.185 kb on + strand, within MPMX19_00931 at 969.311 kb on + strand, within MPMX19_00931 at 969.311 kb on + strand, within MPMX19_00931 at 969.311 kb on + strand, within MPMX19_00931 at 969.312 kb on - strand, within MPMX19_00931 at 969.312 kb on - strand, within MPMX19_00931 at 969.443 kb on + strand, within MPMX19_00931 at 969.443 kb on + strand, within MPMX19_00931 at 969.443 kb on + strand, within MPMX19_00931 at 969.443 kb on + strand, within MPMX19_00931 at 969.443 kb on + strand, within MPMX19_00931 at 969.455 kb on + strand, within MPMX19_00931 at 969.455 kb on + strand, within MPMX19_00931 at 969.456 kb on - strand, within MPMX19_00931 at 969.456 kb on - strand, within MPMX19_00931 at 969.456 kb on - strand, within MPMX19_00931 at 969.485 kb on + strand, within MPMX19_00931 at 969.485 kb on + strand, within MPMX19_00931 at 969.485 kb on + strand, within MPMX19_00931 at 969.485 kb on + strand, within MPMX19_00931 at 969.485 kb on + strand, within MPMX19_00931 at 969.485 kb on + strand, within MPMX19_00931 at 969.485 kb on + strand, within MPMX19_00931 at 969.485 kb on + strand, within MPMX19_00931 at 969.485 kb on + strand, within MPMX19_00931 at 969.486 kb on - strand, within MPMX19_00931 at 969.486 kb on - strand, within MPMX19_00931 at 969.486 kb on - strand, within MPMX19_00931 at 969.486 kb on - strand, within MPMX19_00931 at 969.486 kb on - strand, within MPMX19_00931 at 969.486 kb on - strand, within MPMX19_00931 at 969.486 kb on - strand, within MPMX19_00931 at 969.486 kb on - strand, within MPMX19_00931 at 969.486 kb on - strand, within MPMX19_00931 at 969.486 kb on - strand, within MPMX19_00931 at 969.486 kb on - strand, within MPMX19_00931 at 969.506 kb on + strand, within MPMX19_00931 at 969.506 kb on + strand, within MPMX19_00931 at 969.506 kb on + strand, within MPMX19_00931 at 969.506 kb on + strand, within MPMX19_00931 at 969.506 kb on + strand, within MPMX19_00931 at 969.506 kb on + strand, within MPMX19_00931 at 969.506 kb on + strand, within MPMX19_00931 at 969.506 kb on + strand, within MPMX19_00931 at 969.506 kb on + strand, within MPMX19_00931 at 969.506 kb on + strand, within MPMX19_00931 at 969.506 kb on + strand, within MPMX19_00931 at 969.507 kb on - strand, within MPMX19_00931 at 969.507 kb on - strand, within MPMX19_00931 at 969.507 kb on - strand, within MPMX19_00931 at 969.507 kb on - strand, within MPMX19_00931 at 969.507 kb on - strand, within MPMX19_00931 at 969.548 kb on + strand, within MPMX19_00931 at 969.548 kb on + strand, within MPMX19_00931 at 969.548 kb on + strand, within MPMX19_00931 at 969.548 kb on + strand, within MPMX19_00931 at 969.548 kb on + strand, within MPMX19_00931 at 969.548 kb on + strand, within MPMX19_00931 at 969.548 kb on + strand, within MPMX19_00931 at 969.548 kb on + strand, within MPMX19_00931 at 969.548 kb on + strand, within MPMX19_00931 at 969.548 kb on + strand, within MPMX19_00931 at 969.548 kb on + strand, within MPMX19_00931 at 969.548 kb on + strand, within MPMX19_00931 at 969.548 kb on + strand, within MPMX19_00931 at 969.548 kb on + strand, within MPMX19_00931 at 969.548 kb on + strand, within MPMX19_00931 at 969.548 kb on + strand, within MPMX19_00931 at 969.548 kb on + strand, within MPMX19_00931 at 969.549 kb on - strand, within MPMX19_00931 at 969.549 kb on - strand, within MPMX19_00931 at 969.549 kb on - strand, within MPMX19_00931 at 969.549 kb on - strand, within MPMX19_00931 at 969.549 kb on - strand, within MPMX19_00931 at 969.549 kb on - strand, within MPMX19_00931 at 969.549 kb on - strand, within MPMX19_00931 at 969.549 kb on - strand, within MPMX19_00931 at 969.549 kb on - strand, within MPMX19_00931 at 969.549 kb on - strand, within MPMX19_00931 at 969.549 kb on - strand, within MPMX19_00931 at 969.549 kb on - strand, within MPMX19_00931 at 969.549 kb on - strand, within MPMX19_00931 at 969.549 kb on - strand, within MPMX19_00931 at 969.549 kb on - strand, within MPMX19_00931 at 969.549 kb on - strand, within MPMX19_00931 at 969.549 kb on - strand, within MPMX19_00931 at 969.647 kb on + strand, within MPMX19_00931 at 969.647 kb on + strand, within MPMX19_00931 at 969.647 kb on + strand, within MPMX19_00931 at 969.647 kb on + strand, within MPMX19_00931 at 969.647 kb on + strand, within MPMX19_00931 at 969.647 kb on + strand, within MPMX19_00931 at 969.647 kb on + strand, within MPMX19_00931 at 969.647 kb on + strand, within MPMX19_00931 at 969.648 kb on - strand, within MPMX19_00931 at 969.648 kb on - strand, within MPMX19_00931 at 969.648 kb on - strand, within MPMX19_00931 at 969.648 kb on - strand, within MPMX19_00931 at 969.648 kb on - strand, within MPMX19_00931 at 969.648 kb on - strand, within MPMX19_00931 at 969.648 kb on - strand, within MPMX19_00931 at 969.648 kb on - strand, within MPMX19_00931 at 969.648 kb on - strand, within MPMX19_00931 at 969.684 kb on + strand, within MPMX19_00931 at 969.684 kb on + strand, within MPMX19_00931 at 969.684 kb on + strand, within MPMX19_00931 at 969.684 kb on + strand, within MPMX19_00931 at 969.684 kb on + strand, within MPMX19_00931 at 969.685 kb on - strand, within MPMX19_00931 at 969.685 kb on - strand, within MPMX19_00931 at 969.685 kb on - strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.966 kb on + strand at 969.967 kb on - strand at 969.978 kb on + strand at 969.978 kb on + strand at 969.978 kb on + strand at 969.978 kb on + strand at 969.978 kb on + strand at 969.978 kb on + strand at 969.978 kb on + strand at 969.978 kb on + strand at 969.978 kb on + strand at 969.978 kb on + strand at 969.979 kb on - strand at 969.979 kb on - strand at 969.979 kb on - strand at 969.979 kb on - strand at 969.979 kb on - strand at 969.979 kb on - strand at 969.979 kb on - strand at 969.979 kb on - strand at 969.979 kb on - strand at 970.804 kb on - strand, within MPMX19_00933 at 970.804 kb on - strand, within MPMX19_00933 at 970.804 kb on - strand, within MPMX19_00933 at 970.804 kb on - strand, within MPMX19_00933 at 970.804 kb on - strand, within MPMX19_00933 at 970.804 kb on - strand, within MPMX19_00933 at 970.804 kb on - strand, within MPMX19_00933 at 970.804 kb on - strand, within MPMX19_00933 at 970.804 kb on - strand, within MPMX19_00933 at 970.804 kb on - strand, within MPMX19_00933 at 970.851 kb on - strand, within MPMX19_00933 at 971.401 kb on - strand, within MPMX19_00933
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; high oxygen remove 969,185 + MPMX19_00931 0.46 -0.3 969,185 + MPMX19_00931 0.46 -1.2 969,311 + MPMX19_00931 0.56 -0.3 969,311 + MPMX19_00931 0.56 -0.0 969,311 + MPMX19_00931 0.56 +0.5 969,312 - MPMX19_00931 0.56 +0.2 969,312 - MPMX19_00931 0.56 -0.1 969,443 + MPMX19_00931 0.67 -0.5 969,443 + MPMX19_00931 0.67 +0.6 969,443 + MPMX19_00931 0.67 +0.2 969,443 + MPMX19_00931 0.67 -1.0 969,443 + MPMX19_00931 0.67 +0.2 969,455 + MPMX19_00931 0.68 -0.9 969,455 + MPMX19_00931 0.68 -1.7 969,456 - MPMX19_00931 0.68 +0.3 969,456 - MPMX19_00931 0.68 -0.4 969,456 - MPMX19_00931 0.68 -0.5 969,485 + MPMX19_00931 0.70 -0.5 969,485 + MPMX19_00931 0.70 +0.3 969,485 + MPMX19_00931 0.70 -0.8 969,485 + MPMX19_00931 0.70 -2.3 969,485 + MPMX19_00931 0.70 -0.7 969,485 + MPMX19_00931 0.70 +0.1 969,485 + MPMX19_00931 0.70 -1.2 969,485 + MPMX19_00931 0.70 -0.9 969,485 + MPMX19_00931 0.70 +0.1 969,486 - MPMX19_00931 0.70 -1.8 969,486 - MPMX19_00931 0.70 -0.7 969,486 - MPMX19_00931 0.70 -1.5 969,486 - MPMX19_00931 0.70 -0.0 969,486 - MPMX19_00931 0.70 -0.8 969,486 - MPMX19_00931 0.70 +0.4 969,486 - MPMX19_00931 0.70 +0.0 969,486 - MPMX19_00931 0.70 -0.1 969,486 - MPMX19_00931 0.70 -1.5 969,486 - MPMX19_00931 0.70 -0.3 969,486 - MPMX19_00931 0.70 -0.7 969,506 + MPMX19_00931 0.72 -0.6 969,506 + MPMX19_00931 0.72 -0.3 969,506 + MPMX19_00931 0.72 -0.4 969,506 + MPMX19_00931 0.72 -0.1 969,506 + MPMX19_00931 0.72 -0.1 969,506 + MPMX19_00931 0.72 -0.8 969,506 + MPMX19_00931 0.72 -0.3 969,506 + MPMX19_00931 0.72 +0.4 969,506 + MPMX19_00931 0.72 -0.4 969,506 + MPMX19_00931 0.72 -0.1 969,506 + MPMX19_00931 0.72 -0.0 969,507 - MPMX19_00931 0.72 -0.9 969,507 - MPMX19_00931 0.72 -1.3 969,507 - MPMX19_00931 0.72 -0.3 969,507 - MPMX19_00931 0.72 -1.4 969,507 - MPMX19_00931 0.72 +0.2 969,548 + MPMX19_00931 0.75 +0.3 969,548 + MPMX19_00931 0.75 +0.1 969,548 + MPMX19_00931 0.75 -1.1 969,548 + MPMX19_00931 0.75 +0.3 969,548 + MPMX19_00931 0.75 -1.1 969,548 + MPMX19_00931 0.75 -1.4 969,548 + MPMX19_00931 0.75 -0.1 969,548 + MPMX19_00931 0.75 -2.2 969,548 + MPMX19_00931 0.75 -0.6 969,548 + MPMX19_00931 0.75 -1.7 969,548 + MPMX19_00931 0.75 +0.9 969,548 + MPMX19_00931 0.75 -0.6 969,548 + MPMX19_00931 0.75 -0.8 969,548 + MPMX19_00931 0.75 +0.3 969,548 + MPMX19_00931 0.75 -1.1 969,548 + MPMX19_00931 0.75 -1.7 969,548 + MPMX19_00931 0.75 -0.3 969,549 - MPMX19_00931 0.75 -0.5 969,549 - MPMX19_00931 0.75 -0.2 969,549 - MPMX19_00931 0.75 -0.5 969,549 - MPMX19_00931 0.75 -0.8 969,549 - MPMX19_00931 0.75 -1.1 969,549 - MPMX19_00931 0.75 -0.9 969,549 - MPMX19_00931 0.75 +0.3 969,549 - MPMX19_00931 0.75 -1.4 969,549 - MPMX19_00931 0.75 +0.9 969,549 - MPMX19_00931 0.75 -2.3 969,549 - MPMX19_00931 0.75 -0.1 969,549 - MPMX19_00931 0.75 -0.2 969,549 - MPMX19_00931 0.75 -0.1 969,549 - MPMX19_00931 0.75 -0.4 969,549 - MPMX19_00931 0.75 -1.3 969,549 - MPMX19_00931 0.75 -2.0 969,549 - MPMX19_00931 0.75 -0.1 969,647 + MPMX19_00931 0.83 -0.7 969,647 + MPMX19_00931 0.83 +0.8 969,647 + MPMX19_00931 0.83 -1.3 969,647 + MPMX19_00931 0.83 -0.3 969,647 + MPMX19_00931 0.83 -0.6 969,647 + MPMX19_00931 0.83 +0.8 969,647 + MPMX19_00931 0.83 -0.8 969,647 + MPMX19_00931 0.83 +0.1 969,648 - MPMX19_00931 0.83 -2.0 969,648 - MPMX19_00931 0.83 -0.6 969,648 - MPMX19_00931 0.83 +0.0 969,648 - MPMX19_00931 0.83 +0.2 969,648 - MPMX19_00931 0.83 +0.3 969,648 - MPMX19_00931 0.83 -0.1 969,648 - MPMX19_00931 0.83 -0.6 969,648 - MPMX19_00931 0.83 -0.9 969,648 - MPMX19_00931 0.83 +0.4 969,684 + MPMX19_00931 0.86 +0.8 969,684 + MPMX19_00931 0.86 +0.4 969,684 + MPMX19_00931 0.86 +0.8 969,684 + MPMX19_00931 0.86 +0.2 969,684 + MPMX19_00931 0.86 +0.5 969,685 - MPMX19_00931 0.86 -0.9 969,685 - MPMX19_00931 0.86 +0.3 969,685 - MPMX19_00931 0.86 +0.2 969,686 + MPMX19_00931 0.86 -0.4 969,686 + MPMX19_00931 0.86 -0.3 969,686 + MPMX19_00931 0.86 -2.0 969,686 + MPMX19_00931 0.86 -0.4 969,686 + MPMX19_00931 0.86 -0.8 969,686 + MPMX19_00931 0.86 -0.3 969,686 + MPMX19_00931 0.86 -1.5 969,686 + MPMX19_00931 0.86 +0.1 969,686 + MPMX19_00931 0.86 -0.1 969,686 + MPMX19_00931 0.86 +0.2 969,686 + MPMX19_00931 0.86 -0.2 969,686 + MPMX19_00931 0.86 -0.7 969,686 + MPMX19_00931 0.86 -0.8 969,686 + MPMX19_00931 0.86 -0.4 969,686 + MPMX19_00931 0.86 +1.5 969,687 - MPMX19_00931 0.86 +0.0 969,687 - MPMX19_00931 0.86 +0.1 969,687 - MPMX19_00931 0.86 -0.6 969,687 - MPMX19_00931 0.86 -0.2 969,687 - MPMX19_00931 0.86 +0.3 969,687 - MPMX19_00931 0.86 +1.5 969,687 - MPMX19_00931 0.86 +0.2 969,687 - MPMX19_00931 0.86 +1.3 969,687 - MPMX19_00931 0.86 +0.1 969,687 - MPMX19_00931 0.86 -2.0 969,687 - MPMX19_00931 0.86 -0.8 969,687 - MPMX19_00931 0.86 -1.7 969,687 - MPMX19_00931 0.86 -1.3 969,687 - MPMX19_00931 0.86 -0.3 969,687 - MPMX19_00931 0.86 +0.0 969,687 - MPMX19_00931 0.86 -1.5 969,687 - MPMX19_00931 0.86 -0.4 969,687 - MPMX19_00931 0.86 -1.6 969,687 - MPMX19_00931 0.86 -0.3 969,687 - MPMX19_00931 0.86 +0.0 969,687 - MPMX19_00931 0.86 -0.3 969,966 + -0.9 969,967 - -1.0 969,978 + -0.0 969,978 + -0.9 969,978 + -0.2 969,978 + +0.5 969,978 + +0.6 969,978 + -0.4 969,978 + +0.3 969,978 + -0.5 969,978 + +0.0 969,978 + -0.4 969,979 - +0.5 969,979 - -0.6 969,979 - -0.8 969,979 - -1.2 969,979 - +0.3 969,979 - +0.3 969,979 - -0.7 969,979 - +0.4 969,979 - -0.3 970,804 - MPMX19_00933 0.13 -1.0 970,804 - MPMX19_00933 0.13 -2.1 970,804 - MPMX19_00933 0.13 -2.1 970,804 - MPMX19_00933 0.13 -1.7 970,804 - MPMX19_00933 0.13 -1.2 970,804 - MPMX19_00933 0.13 -1.4 970,804 - MPMX19_00933 0.13 -2.4 970,804 - MPMX19_00933 0.13 -1.2 970,804 - MPMX19_00933 0.13 -0.0 970,804 - MPMX19_00933 0.13 -1.5 970,851 - MPMX19_00933 0.18 +0.5 971,401 - MPMX19_00933 0.75 -0.4
Or see this region's nucleotide sequence