Experiment: Erythromycin stress 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS15460 and ABZR88_RS15465 are separated by 69 nucleotides ABZR88_RS15465 and ABZR88_RS15470 are separated by 245 nucleotides ABZR88_RS15470 and ABZR88_RS15475 are separated by 257 nucleotides ABZR88_RS15475 and ABZR88_RS15480 are separated by 156 nucleotides
ABZR88_RS15460: ABZR88_RS15460 - YpdA family putative bacillithiol disulfide reductase, at 3,826,825 to 3,827,781
_RS15460
ABZR88_RS15465: ABZR88_RS15465 - response regulator, at 3,827,851 to 3,828,219
_RS15465
ABZR88_RS15470: ABZR88_RS15470 - response regulator transcription factor, at 3,828,465 to 3,828,830
_RS15470
ABZR88_RS15475: ABZR88_RS15475 - helix-turn-helix domain-containing protein, at 3,829,088 to 3,829,339
_RS15475
ABZR88_RS15480: ABZR88_RS15480 - enoyl-CoA hydratase/isomerase family protein, at 3,829,496 to 3,830,272
_RS15480
Position (kb)
3828
3829 Strain fitness (log2 ratio)
-1
0
1
2 at 3827.486 kb on + strand, within ABZR88_RS15460 at 3827.506 kb on - strand, within ABZR88_RS15460 at 3827.528 kb on + strand, within ABZR88_RS15460 at 3827.771 kb on + strand at 3827.779 kb on + strand at 3827.822 kb on - strand at 3827.872 kb on - strand at 3828.047 kb on + strand, within ABZR88_RS15465 at 3828.138 kb on + strand, within ABZR88_RS15465 at 3828.138 kb on + strand, within ABZR88_RS15465 at 3828.180 kb on + strand, within ABZR88_RS15465 at 3828.339 kb on - strand at 3828.339 kb on - strand at 3828.587 kb on + strand, within ABZR88_RS15470 at 3828.662 kb on + strand, within ABZR88_RS15470 at 3828.745 kb on + strand, within ABZR88_RS15470 at 3828.890 kb on + strand at 3828.957 kb on - strand at 3829.365 kb on + strand at 3829.366 kb on - strand at 3829.437 kb on + strand at 3829.546 kb on + strand at 3829.553 kb on - strand at 3829.789 kb on + strand, within ABZR88_RS15480 at 3829.789 kb on + strand, within ABZR88_RS15480 at 3829.819 kb on - strand, within ABZR88_RS15480
Per-strain Table
Position Strand Gene LocusTag Fraction Erythromycin stress 0.05 mg/ml remove 3,827,486 + ABZR88_RS15460 0.69 +0.2 3,827,506 - ABZR88_RS15460 0.71 +1.0 3,827,528 + ABZR88_RS15460 0.73 +0.4 3,827,771 + -0.6 3,827,779 + -0.3 3,827,822 - +0.4 3,827,872 - +0.5 3,828,047 + ABZR88_RS15465 0.53 -0.1 3,828,138 + ABZR88_RS15465 0.78 -0.3 3,828,138 + ABZR88_RS15465 0.78 -0.6 3,828,180 + ABZR88_RS15465 0.89 -0.2 3,828,339 - +0.9 3,828,339 - +0.6 3,828,587 + ABZR88_RS15470 0.33 -0.2 3,828,662 + ABZR88_RS15470 0.54 -0.3 3,828,745 + ABZR88_RS15470 0.77 -0.4 3,828,890 + +0.8 3,828,957 - +0.2 3,829,365 + +0.3 3,829,366 - +0.9 3,829,437 + -0.1 3,829,546 + -0.3 3,829,553 - +1.9 3,829,789 + ABZR88_RS15480 0.38 -0.4 3,829,789 + ABZR88_RS15480 0.38 -1.2 3,829,819 - ABZR88_RS15480 0.42 +0.1
Or see this region's nucleotide sequence