Experiment: Erythromycin stress 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS02750 and ABZR88_RS02755 are separated by 95 nucleotides ABZR88_RS02755 and ABZR88_RS02760 overlap by 4 nucleotides ABZR88_RS02760 and ABZR88_RS02765 are separated by 73 nucleotides ABZR88_RS02765 and ABZR88_RS02770 are separated by 87 nucleotides
ABZR88_RS02750: ABZR88_RS02750 - 3-hydroxyacyl-CoA dehydrogenase family protein, at 647,831 to 648,727
_RS02750
ABZR88_RS02755: ABZR88_RS02755 - dethiobiotin synthase, at 648,823 to 649,458
_RS02755
ABZR88_RS02760: ABZR88_RS02760 - pyridoxal phosphate-dependent aminotransferase family protein, at 649,455 to 650,570
_RS02760
ABZR88_RS02765: ABZR88_RS02765 - periplasmic heavy metal sensor, at 650,644 to 651,057
_RS02765
ABZR88_RS02770: ABZR88_RS02770 - LexA family transcriptional regulator, at 651,145 to 651,924
_RS02770
Position (kb) 649
650
651 Strain fitness (log2 ratio) -1
0
1 at 648.604 kb on + strand, within ABZR88_RS02750 at 648.728 kb on - strand at 648.939 kb on - strand, within ABZR88_RS02755 at 649.108 kb on - strand, within ABZR88_RS02755 at 649.296 kb on + strand, within ABZR88_RS02755 at 649.297 kb on - strand, within ABZR88_RS02755 at 649.333 kb on - strand, within ABZR88_RS02755 at 649.333 kb on - strand, within ABZR88_RS02755 at 649.368 kb on - strand, within ABZR88_RS02755 at 649.473 kb on - strand at 649.508 kb on + strand at 649.509 kb on - strand at 649.815 kb on + strand, within ABZR88_RS02760 at 650.069 kb on - strand, within ABZR88_RS02760 at 650.073 kb on - strand, within ABZR88_RS02760 at 650.134 kb on - strand, within ABZR88_RS02760 at 650.147 kb on + strand, within ABZR88_RS02760 at 650.188 kb on - strand, within ABZR88_RS02760 at 650.624 kb on - strand at 651.037 kb on + strand at 651.105 kb on - strand at 651.128 kb on - strand at 651.129 kb on + strand at 651.151 kb on - strand at 651.151 kb on - strand at 651.176 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Erythromycin stress 0.05 mg/ml remove 648,604 + ABZR88_RS02750 0.86 +0.1 648,728 - -0.1 648,939 - ABZR88_RS02755 0.18 -0.3 649,108 - ABZR88_RS02755 0.45 -1.1 649,296 + ABZR88_RS02755 0.74 -0.1 649,297 - ABZR88_RS02755 0.75 +0.2 649,333 - ABZR88_RS02755 0.80 -0.3 649,333 - ABZR88_RS02755 0.80 +0.1 649,368 - ABZR88_RS02755 0.86 -0.8 649,473 - +0.7 649,508 + -1.0 649,509 - -0.4 649,815 + ABZR88_RS02760 0.32 +0.0 650,069 - ABZR88_RS02760 0.55 -0.1 650,073 - ABZR88_RS02760 0.55 -0.2 650,134 - ABZR88_RS02760 0.61 +0.0 650,147 + ABZR88_RS02760 0.62 +0.3 650,188 - ABZR88_RS02760 0.66 -0.0 650,624 - +0.1 651,037 + -0.2 651,105 - +0.4 651,128 - -0.1 651,129 + +0.2 651,151 - -0.0 651,151 - -0.2 651,176 - +0.1
Or see this region's nucleotide sequence